RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 XRCC1P18887 633 aaPredicted RBP17.88■□□□□ 0.45
SMPD3-211ENST00000568373 POLR2EP19388 210 aaKnown RBP17.88■□□□□ 0.45
SMPD3-211ENST00000568373 ME2P23368 584 aa17.88■□□□□ 0.45
SMPD3-211ENST00000568373 RECQLP46063 649 aaPredicted RBP17.88■□□□□ 0.45
SMPD3-211ENST00000568373 PSME3P61289 254 aa17.88■□□□□ 0.45
SMPD3-211ENST00000568373 POLR2LP62875 67 aaKnown RBP17.88■□□□□ 0.45
SMPD3-211ENST00000568373 ATP13A5Q4VNC0 1218 aa17.88■□□□□ 0.45
SMPD3-211ENST00000568373 DHDDSQ86SQ9 333 aa17.88■□□□□ 0.45
SMPD3-211ENST00000568373 MIER2Q8N344 545 aa17.88■□□□□ 0.45
SMPD3-211ENST00000568373 MYLIPQ8WY64 445 aa17.88■□□□□ 0.45
SMPD3-211ENST00000568373 ING5Q8WYH8 240 aa17.88■□□□□ 0.45
SMPD3-211ENST00000568373 KLHL32Q96NJ5 620 aa17.88■□□□□ 0.45
SMPD3-211ENST00000568373 FAM126AQ9BYI3 521 aaPredicted RBP17.88■□□□□ 0.45
SMPD3-211ENST00000568373 SLC2A11Q9BYW1 496 aa17.88■□□□□ 0.45
SMPD3-211ENST00000568373 ZDHHC7Q9NXF8 308 aa17.88■□□□□ 0.45
SMPD3-211ENST00000568373 OARD1Q9Y530 152 aa17.88■□□□□ 0.45
SMPD3-211ENST00000568373 CHD9Q3L8U1 2897 aa17.88■□□□□ 0.45
SMPD3-211ENST00000568373 TRIM24O15164 1050 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 ARHGEF15O94989 841 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 C1SP09871 688 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 PRR35P0CG20 571 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 FLOT2Q14254 428 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 CBX2Q14781 532 aaPredicted RBP17.87■□□□□ 0.45
SMPD3-211ENST00000568373 XKR7Q5GH72 579 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 LRRC73Q5JTD7 316 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 OGFOD2Q6N063 350 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 RNF111Q6ZNA4 994 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 RFLNAQ6ZTI6 216 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 NAT16Q8N8M0 369 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 OR52B6Q8NGF0 335 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 COPS8Q99627 209 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 PFDN4Q9NQP4 134 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 SDR39U1Q9NRG7 319 aaPredicted RBP17.87■□□□□ 0.45
SMPD3-211ENST00000568373 LATS2Q9NRM7 1088 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 ZNF197O14709 1029 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 SLC9A3R1O14745 358 aaPredicted RBP17.87■□□□□ 0.45
SMPD3-211ENST00000568373 MRASO14807 208 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 IDO1P14902 403 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 PSMD8P48556 350 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 SPINT3P49223 89 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 IRX1P78414 480 aaPredicted RBP17.87■□□□□ 0.45
SMPD3-211ENST00000568373 CRY1Q16526 586 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 GSTA3Q16772 222 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 TTLL9Q3SXZ7 439 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 TRIM68Q6AZZ1 485 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 BRAT1Q6PJG6 821 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 HACD2Q6Y1H2 254 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 RNF148Q8N7C7 305 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 FRS2Q8WU20 508 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 ZNF707Q96C28 371 aaPredicted RBP17.87■□□□□ 0.45
SMPD3-211ENST00000568373 ABHD8Q96I13 439 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 NOL11Q9H8H0 719 aaKnown RBP17.87■□□□□ 0.45
SMPD3-211ENST00000568373 BCAP29Q9UHQ4 241 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 ADAMTS6Q9UKP5 1117 aa17.87■□□□□ 0.45
SMPD3-211ENST00000568373 BBIP1A8MTZ0 92 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 PER2O15055 1255 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 OR4F21O95013 312 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 C18orf21Q32NC0 220 aaPredicted RBP17.86■□□□□ 0.45
SMPD3-211ENST00000568373 GOLGA7Q7Z5G4 137 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 CYB5D2Q8WUJ1 264 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 N4BP2L2Q92802 583 aaPredicted RBP17.86■□□□□ 0.45
SMPD3-211ENST00000568373 ULK4Q96C45 1275 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 MRGPRX3Q96LB0 322 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 ZNF184Q99676 751 aaPredicted RBP17.86■□□□□ 0.45
SMPD3-211ENST00000568373 CCT7Q99832 543 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 HEPHQ9BQS7 1158 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 NSUN3Q9H649 340 aaKnown RBP17.86■□□□□ 0.45
SMPD3-211ENST00000568373 ADA2Q9NZK5 511 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 PTBP2Q9UKA9 531 aaKnown RBP17.86■□□□□ 0.45
SMPD3-211ENST00000568373 MRPS23Q9Y3D9 190 aaKnown RBP17.86■□□□□ 0.45
SMPD3-211ENST00000568373 IGLV3-16A0A075B6K0 115 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 E7ENX8 843 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 H3BNX3 289 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 TRIM38O00635 465 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 MATN4O95460 622 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 RB1P06400 928 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 MSX2P35548 267 aaPredicted RBP17.86■□□□□ 0.45
SMPD3-211ENST00000568373 ERVPABLB-1P60509 514 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 B4GALNT1Q00973 533 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 MS4A2Q01362 244 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 LETMD1Q6P1Q0 360 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 SPATA19Q7Z5L4 167 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 KBTBD2Q8IY47 623 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 CDYL2Q8N8U2 506 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 SORCS1Q8WY21 1168 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 ACOX2Q99424 681 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 MRPL40Q9NQ50 206 aaKnown RBP17.86■□□□□ 0.45
SMPD3-211ENST00000568373 KCTD5Q9NXV2 234 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 KLHL42Q9P2K6 505 aa17.86■□□□□ 0.45
SMPD3-211ENST00000568373 CCDC85CA6NKD9 419 aa17.85■□□□□ 0.45
SMPD3-211ENST00000568373 GUCA1CO95843 209 aa17.85■□□□□ 0.45
SMPD3-211ENST00000568373 POU2F2P09086 479 aa17.85■□□□□ 0.45
SMPD3-211ENST00000568373 MYOGP15173 224 aa17.85■□□□□ 0.45
SMPD3-211ENST00000568373 NNMTP40261 264 aa17.85■□□□□ 0.45
SMPD3-211ENST00000568373 NME5P56597 212 aa17.85■□□□□ 0.45
SMPD3-211ENST00000568373 GTF2H2Q13888 395 aa17.85■□□□□ 0.45
SMPD3-211ENST00000568373 ARHGEF7Q14155 803 aa17.85■□□□□ 0.45
SMPD3-211ENST00000568373 RPS6KA2Q15349 733 aa17.85■□□□□ 0.45
SMPD3-211ENST00000568373 PHKG1Q16816 387 aa17.85■□□□□ 0.45
SMPD3-211ENST00000568373 GTF2H2CQ6P1K8 395 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms