RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 TUBA1BP68363 451 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 MAP2K1Q02750 393 aaPredicted RBP3.63□□□□□ -1.83
HDAC2-208ENST00000520746 GRIK2Q13002 908 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 GAGE1Q13065 139 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 GAGE4Q13068 117 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 SLC39A6Q13433 755 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 CRYMQ14894 314 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 SLC39A14Q15043 492 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 CALCRLQ16602 461 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 ATP13A5Q4VNC0 1218 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 GKAP1Q5VSY0 366 aaPredicted RBP3.63□□□□□ -1.83
HDAC2-208ENST00000520746 DUS1LQ6P1R4 473 aaKnown RBP3.63□□□□□ -1.83
HDAC2-208ENST00000520746 KCTD18Q6PI47 426 aaPredicted RBP3.63□□□□□ -1.83
HDAC2-208ENST00000520746 SARM1Q6SZW1 724 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 GLDNQ6ZMI3 551 aaPredicted RBP3.63□□□□□ -1.83
HDAC2-208ENST00000520746 DPPA4Q7L190 304 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 TTC39CQ8N584 583 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 ZNF114Q8NC26 417 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 SGCDQ92629 289 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 RTP4Q96DX8 246 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 C3orf30Q96M34 536 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 NCAPGQ9BPX3 1015 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 SDF4Q9BRK5 362 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 TMX4Q9H1E5 349 aaPredicted RBP3.63□□□□□ -1.83
HDAC2-208ENST00000520746 IL25Q9H293 177 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 PDZD7Q9H5P4 517 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 POLKQ9UBT6 870 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 NARFQ9UHQ1 456 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 R3HDM2Q9Y2K5 976 aaKnown RBP3.63□□□□□ -1.83
HDAC2-208ENST00000520746 KIAA1210Q9ULL0 1709 aa3.63□□□□□ -1.83
HDAC2-208ENST00000520746 USP42Q9H9J4 1324 aaKnown RBP3.63□□□□□ -1.83
HDAC2-208ENST00000520746 C4BP0C0L5 1744 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 FRMD3A2A2Y4 597 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 H3BQ06 376 aaPredicted RBP3.62□□□□□ -1.83
HDAC2-208ENST00000520746 HCRTR2O43614 444 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 JRKO75564 520 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 KDM4BO94953 1096 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 CLTBP09497 229 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 HADHAP40939 763 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 PRCPP42785 496 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 HNRNPH2P55795 449 aaKnown RBP3.62□□□□□ -1.83
HDAC2-208ENST00000520746 CSNK2A1P68400 391 aaPredicted RBP3.62□□□□□ -1.83
HDAC2-208ENST00000520746 EEF1A2Q05639 463 aaKnown RBP3.62□□□□□ -1.83
HDAC2-208ENST00000520746 GRSF1Q12849 480 aaKnown RBP eCLIP3.62□□□□□ -1.83
HDAC2-208ENST00000520746 SF3B4Q15427 424 aaKnown RBP eCLIP3.62□□□□□ -1.83
HDAC2-208ENST00000520746 OASLQ15646 514 aaKnown RBP3.62□□□□□ -1.83
HDAC2-208ENST00000520746 ADIPOQQ15848 244 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 WDR78Q5VTH9 848 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 RGMBQ6NW40 437 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 TMEM154Q6P9G4 183 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 KRBA2Q6ZNG9 492 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 SEPT14Q6ZU15 432 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 CACNA2D4Q7Z3S7 1137 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 CSNK2A3Q8NEV1 391 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 ORAI1Q96D31 301 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 HES6Q96HZ4 224 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 ABHD8Q96I13 439 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 ADGRG7Q96K78 797 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 TESK2Q96S53 571 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 CMKLR1Q99788 373 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 TREX2Q9BQ50 279 aaPredicted RBP3.62□□□□□ -1.83
HDAC2-208ENST00000520746 SPRY4Q9C004 299 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 SMARCAD1Q9H4L7 1026 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 ACSS1Q9NUB1 689 aaPredicted RBP3.62□□□□□ -1.83
HDAC2-208ENST00000520746 HAUS2Q9NVX0 235 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 MALT1Q9UDY8 824 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 HACL1Q9UJ83 578 aa3.62□□□□□ -1.83
HDAC2-208ENST00000520746 CICQ96RK0 1608 aaPredicted RBP3.62□□□□□ -1.83
HDAC2-208ENST00000520746 DOT1LQ8TEK3 1739 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 WNK3Q9BYP7 1800 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 ANKRD18BA2A2Z9 1011 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 TCERG1O14776 1098 aaKnown RBP3.61□□□□□ -1.83
HDAC2-208ENST00000520746 SCAMP1O15126 338 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 AFPP02771 609 aaKnown RBP3.61□□□□□ -1.83
HDAC2-208ENST00000520746 HMOX1P09601 288 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 TMEM11P17152 192 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 MCM3P25205 808 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 UBA7P41226 1012 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 CASP2P42575 452 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 CLNS1AP54105 237 aaKnown RBP3.61□□□□□ -1.83
HDAC2-208ENST00000520746 DRG2P55039 364 aaKnown RBP3.61□□□□□ -1.83
HDAC2-208ENST00000520746 SEC61BP60468 96 aaKnown RBP3.61□□□□□ -1.83
HDAC2-208ENST00000520746 ZBED6P86452 979 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 ECT2LQ008S8 904 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 TFAP4Q01664 338 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 FOXM1Q08050 763 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 TEFQ10587 303 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 ZNF155Q12901 538 aaPredicted RBP3.61□□□□□ -1.83
HDAC2-208ENST00000520746 DLG1Q12959 904 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 ZNF672Q499Z4 452 aaPredicted RBP3.61□□□□□ -1.83
HDAC2-208ENST00000520746 SETMARQ53H47 684 aaPredicted RBP3.61□□□□□ -1.83
HDAC2-208ENST00000520746 DCST1Q5T197 706 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 LRIF1Q5T3J3 769 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 FAM205BPQ63HN1 556 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 MZT2BQ6NZ67 158 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 CCNI2Q6ZMN8 369 aaPredicted RBP3.61□□□□□ -1.83
HDAC2-208ENST00000520746 CHST9Q7L1S5 443 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 NBPF5PQ86XG9 351 aaPredicted RBP3.61□□□□□ -1.83
HDAC2-208ENST00000520746 TICAM1Q8IUC6 712 aa3.61□□□□□ -1.83
HDAC2-208ENST00000520746 TEX11Q8IYF3 940 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms