RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 DKK3Q9UBP4 350 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 OR12D3Q9UGF7 316 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 GJD2Q9UKL4 321 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 GPSM3Q9Y4H4 160 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 A8MV72 311 aaPredicted RBP13.6□□□□□ -0.23
NPHP4-207ENST00000470763 MITFO75030 526 aaPredicted RBP13.6□□□□□ -0.23
NPHP4-207ENST00000470763 TULP3O75386 442 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 FYNP06241 537 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 ANXA6P08133 673 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 PRDX3P30048 256 aaKnown RBP13.6□□□□□ -0.23
NPHP4-207ENST00000470763 CLCN5P51795 746 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 OAZ1P54368 228 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 EMX2Q04743 252 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 AAK1Q2M2I8 961 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 LDLRAD1Q5T700 205 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 KIAA0930Q6ICG6 404 aaPredicted RBP13.6□□□□□ -0.23
NPHP4-207ENST00000470763 CCBE1Q6UXH8 406 aaPredicted RBP13.6□□□□□ -0.23
NPHP4-207ENST00000470763 LINC00299Q6ZSB3 139 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 UNC93AQ86WB7 457 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 SIX5Q8N196 739 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 SVOPQ8N4V2 548 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 YME1L1Q96TA2 773 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 LIMD1Q9UGP4 676 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 GINS2Q9Y248 185 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 N6AMT1Q9Y5N5 214 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 PPP2R3BQ9Y5P8 575 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 M0QX08 132 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 HPRP00739 348 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 MT-ND2P03891 347 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 ALOX12P18054 663 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 RPL34P49207 117 aaKnown RBP13.6□□□□□ -0.23
NPHP4-207ENST00000470763 TOP3AQ13472 1001 aaPredicted RBP13.6□□□□□ -0.23
NPHP4-207ENST00000470763 LAPTM4AQ15012 233 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 OR4D1Q15615 310 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 SMN1Q16637 294 aaKnown RBP13.6□□□□□ -0.23
NPHP4-207ENST00000470763 ZNF691Q5VV52 312 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 LAIR1Q6GTX8 287 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 TSPAN17Q96FV3 270 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 ACOX2Q99424 681 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 FAM49AQ9H0Q0 323 aaPredicted RBP13.6□□□□□ -0.23
NPHP4-207ENST00000470763 HTTP42858 3142 aa13.6□□□□□ -0.23
NPHP4-207ENST00000470763 YJEFN3A6XGL0 299 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 BCKDKO14874 412 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 MRPS15P82914 257 aaKnown RBP13.59□□□□□ -0.23
NPHP4-207ENST00000470763 SIM2Q14190 667 aaPredicted RBP13.59□□□□□ -0.23
NPHP4-207ENST00000470763 BNIPLQ7Z465 357 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 LACC1Q8IV20 430 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 EDEM1Q92611 657 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 PROX1Q92786 737 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 AIG1Q9NVV5 245 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 COMMD8Q9NX08 183 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 DNAJB5O75953 348 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 NTRK1P04629 796 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 FGF4P08620 206 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 DNAJB2P25686 324 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 GRK3P35626 688 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 CLK3P49761 638 aaKnown RBP13.59□□□□□ -0.23
NPHP4-207ENST00000470763 YWHAHQ04917 246 aaPredicted RBP13.59□□□□□ -0.23
NPHP4-207ENST00000470763 SPATS1Q496A3 300 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 B3GNT8Q7Z7M8 397 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 DCP2Q8IU60 420 aaKnown RBP13.59□□□□□ -0.23
NPHP4-207ENST00000470763 HID1Q8IV36 788 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 OR10Q1Q8NGQ4 319 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 DPF3Q92784 378 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 SPATA33Q96N06 139 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 RBM4BQ9BQ04 359 aaKnown RBP13.59□□□□□ -0.23
NPHP4-207ENST00000470763 RBM4Q9BWF3 364 aaKnown RBP13.59□□□□□ -0.23
NPHP4-207ENST00000470763 GLOD4Q9HC38 313 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 ADAMTS5Q9UNA0 930 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 SOWAHBA6NEL2 793 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 NDST3O95803 873 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 ST13P50502 369 aaKnown RBP13.59□□□□□ -0.23
NPHP4-207ENST00000470763 MAP3K7CLP57077 242 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 PCM1Q15154 2024 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 SYT16Q17RD7 645 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 PJA1Q8NG27 643 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 DMRTB1Q96MA1 342 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 HBEGFQ99075 208 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 ULBP1Q9BZM6 244 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 TKTL2Q9H0I9 626 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 SIK2Q9H0K1 926 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 DCSTAMPQ9H295 470 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 MARCH4Q9P2E8 410 aaPredicted RBP13.59□□□□□ -0.23
NPHP4-207ENST00000470763 OPTCQ9UBM4 332 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 DNAJB9Q9UBS3 223 aa13.59□□□□□ -0.23
NPHP4-207ENST00000470763 ISPDA4D126 451 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 NCF1BA6NI72 391 aaPredicted RBP13.58□□□□□ -0.24
NPHP4-207ENST00000470763 NCF1CA8MVU1 366 aaPredicted RBP13.58□□□□□ -0.24
NPHP4-207ENST00000470763 EFCAB9A8MZ26 197 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 ANXA9O76027 345 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 LCKP06239 509 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 NCF1P14598 390 aaPredicted RBP13.58□□□□□ -0.24
NPHP4-207ENST00000470763 CD36P16671 472 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 PRKCAP17252 672 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 DGKQP52824 942 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 ACOX1Q15067 660 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 RAB44Q7Z6P3 723 aaPredicted RBP13.58□□□□□ -0.24
NPHP4-207ENST00000470763 MICU2Q8IYU8 434 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 METTL4Q8N3J2 472 aa13.58□□□□□ -0.24
NPHP4-207ENST00000470763 ASCC1Q8N9N2 400 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms