RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 CCDC97Q96F63 343 aaPredicted RBP14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 CERS2Q96G23 380 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 TCF12Q99081 682 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 CAAP1Q9H8G2 361 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 MTRF1LQ9UGC7 380 aaKnown RBP14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 NEUROG3Q9Y4Z2 214 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 ST14Q9Y5Y6 855 aa14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 DNMT3AQ9Y6K1 912 aaPredicted RBP14.72□□□□□ -0.05
CDC42SE1-203ENST00000470278 PFDN6O15212 129 aa14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 CBFA2T3O75081 653 aa14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 SLU7O95391 586 aaKnown RBP14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 CELA2BP08218 269 aaPredicted RBP14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 GSTM1P09488 218 aa14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 ZNF7P17097 686 aaPredicted RBP14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 CTBSQ01459 385 aa14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 GSTM4Q03013 218 aa14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 DMPKQ09013 629 aa14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 ZCCHC8Q6NZY4 707 aaKnown RBP14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 ZNF449Q6P9G9 518 aa14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 SDCCAG8Q86SQ7 713 aaPredicted RBP14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 KCNMB4Q86W47 210 aa14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 LRRC6Q86X45 466 aa14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 CNTN4Q8IWV2 1026 aa14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 FAM181AQ8N9Y4 354 aa14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 GABPB2Q8TAK5 448 aaPredicted RBP14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 GSDMBQ8TAX9 411 aa14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 PYROXD1Q8WU10 500 aa14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 CAMK1GQ96NX5 476 aa14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 FMO2Q99518 471 aa14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 FAM167BQ9BTA0 163 aa14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 BOCQ9BWV1 1114 aa14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 SAYSD1Q9NPB0 183 aa14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 C20orf96Q9NUD7 363 aaPredicted RBP14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 INTS10Q9NVR2 710 aaKnown RBP14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 ZNHIT2Q9UHR6 403 aa14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 PCOLCE2Q9UKZ9 415 aa14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 VPS9D1Q9Y2B5 631 aa14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 GPSM3Q9Y4H4 160 aa14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 ARID1BQ8NFD5 2236 aaPredicted RBP14.71□□□□□ -0.05
CDC42SE1-203ENST00000470278 FAM221BA6H8Z2 402 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 OR2AG2A6NM03 316 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 F8W8V4 182 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 YY2O15391 372 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 ANXA6P08133 673 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 GSTA2P09210 222 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 RHOXF2BP0C7M4 288 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 ACP5P13686 325 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 VCLP18206 1134 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 RPS3P23396 243 aaKnown RBP eCLIP14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 CARSP49589 748 aaKnown RBP14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 SIM1P81133 766 aaPredicted RBP14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 C1orf61Q13536 156 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 THOC5Q13769 683 aaKnown RBP14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 HLTFQ14527 1009 aaKnown RBP eCLIP14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 HP1BP3Q5SSJ5 553 aaPredicted RBP14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 TEX35Q5T0J7 233 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 C6orf132Q5T0Z8 1188 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 ZNF470Q6ECI4 717 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 TMEM220Q6QAJ8 160 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 CRTC3Q6UUV7 619 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 KIAA0408Q6ZU52 694 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 CHST15Q7LFX5 561 aaPredicted RBP14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 GALNT7Q86SF2 657 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 ANKMY2Q8IV38 441 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 CCL4L1Q8NHW4 92 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 LPGAT1Q92604 370 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 SGF29Q96ES7 293 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 CFAP36Q96G28 342 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 RHOXF2Q9BQY4 288 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 VPS37BQ9H9H4 285 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 IL1RAPL1Q9NZN1 696 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 NCKIPSDQ9NZQ3 722 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 BTBD3Q9Y2F9 522 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 PRKAB1Q9Y478 270 aa14.7□□□□□ -0.06
CDC42SE1-203ENST00000470278 PIKFYVEQ9Y2I7 2098 aa14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 C17orf113A0A1B0GUU1 675 aa14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 GOLGA8KD6RF30 607 aa14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 GOLGA8TH3BQL2 631 aa14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 TRIM38O00635 465 aa14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 PRMT5O14744 637 aaPredicted RBP14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 FFAR2O15552 330 aa14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 SH3BP5O60239 455 aa14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 OR1I1O60431 355 aa14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 SPAG6O75602 509 aa14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 TNFRSF8P28908 595 aa14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 ACTR1BP42025 376 aa14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 SLC1A2P43004 574 aa14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 ACTR1AP61163 376 aa14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 INSCQ1MX18 579 aa14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 DEFB133Q30KQ1 61 aa14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 PROX2Q3B8N5 592 aa14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 HSP90AA5PQ58FG0 334 aa14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 CYS1Q717R9 158 aa14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 DET1Q7L5Y6 550 aa14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 RAB44Q7Z6P3 723 aaPredicted RBP14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 TAF8Q7Z7C8 310 aa14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 LDB1Q86U70 411 aaPredicted RBP14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 AMZ2Q86W34 360 aa14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 CLDN19Q8N6F1 224 aa14.69□□□□□ -0.06
CDC42SE1-203ENST00000470278 OTUD6BQ8N6M0 293 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms