RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 DDHD1Q8NEL9 900 aa20.64■□□□□ 0.89
VSX1-206ENST00000444511 OR6C1Q96RD1 312 aa20.64■□□□□ 0.89
VSX1-206ENST00000444511 FERMT1Q9BQL6 677 aa20.64■□□□□ 0.89
VSX1-206ENST00000444511 TRIM4Q9C037 500 aa20.64■□□□□ 0.89
VSX1-206ENST00000444511 GBA3Q9H227 469 aa20.64■□□□□ 0.89
VSX1-206ENST00000444511 MACROD2A1Z1Q3 448 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 OR2AG2A6NM03 316 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 STX7O15400 261 aaKnown RBP20.63■□□□□ 0.89
VSX1-206ENST00000444511 SUV39H1O43463 412 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 KIF1CO43896 1103 aaKnown RBP20.63■□□□□ 0.89
VSX1-206ENST00000444511 ANXA9O76027 345 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 AGTP01019 485 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 RBL1P28749 1068 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 AKT1P31749 480 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 STAT5AP42229 794 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 CTSCP53634 463 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 GEMP55040 296 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 SH3BP2P78314 561 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 MC1RQ01726 317 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 DMPKQ09013 629 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 CDC20Q12834 499 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 MAP7Q14244 749 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 IL11RAQ14626 422 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 ITPRIPL1Q6GPH6 555 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 FAM92BQ6ZTR7 304 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 PRSS42Q7Z5A4 293 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 RASGRP3Q8IV61 690 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 STARD8Q92502 1023 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 FICDQ9BVA6 458 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 C10orf88Q9H8K7 445 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 IL17BQ9UHF5 180 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 PSMD13Q9UNM6 376 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 DNMT3AQ9Y6K1 912 aaPredicted RBP20.63■□□□□ 0.89
VSX1-206ENST00000444511 RPS6KL1Q9Y6S9 549 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 TENM4Q6N022 2769 aa20.63■□□□□ 0.89
VSX1-206ENST00000444511 MSH3P20585 1137 aa20.62■□□□□ 0.89
VSX1-206ENST00000444511 COPS2P61201 443 aa20.62■□□□□ 0.89
VSX1-206ENST00000444511 LONRF2Q1L5Z9 754 aa20.62■□□□□ 0.89
VSX1-206ENST00000444511 C6orf15Q6UXA7 325 aaPredicted RBP20.62■□□□□ 0.89
VSX1-206ENST00000444511 ZNF398Q8TD17 642 aa20.62■□□□□ 0.89
VSX1-206ENST00000444511 RNF31Q96EP0 1072 aa20.62■□□□□ 0.89
VSX1-206ENST00000444511 ELMO2Q96JJ3 720 aa20.62■□□□□ 0.89
VSX1-206ENST00000444511 ZNF514Q96K75 400 aaPredicted RBP20.62■□□□□ 0.89
VSX1-206ENST00000444511 SMOXQ9NWM0 555 aa20.62■□□□□ 0.89
VSX1-206ENST00000444511 EPHA6Q9UF33 1036 aa20.62■□□□□ 0.89
VSX1-206ENST00000444511 TUBD1Q9UJT1 453 aa20.62■□□□□ 0.89
VSX1-206ENST00000444511 C2orf81A6NN90 581 aa20.61■□□□□ 0.89
VSX1-206ENST00000444511 GAPDHSO14556 408 aaPredicted RBP20.61■□□□□ 0.89
VSX1-206ENST00000444511 PRAMEF1O95521 474 aa20.61■□□□□ 0.89
VSX1-206ENST00000444511 ZNF28P17035 718 aa20.61■□□□□ 0.89
VSX1-206ENST00000444511 TCN2P20062 427 aa20.61■□□□□ 0.89
VSX1-206ENST00000444511 FECHP22830 423 aa20.61■□□□□ 0.89
VSX1-206ENST00000444511 CTNNA2P26232 953 aa20.61■□□□□ 0.89
VSX1-206ENST00000444511 PBLDP30039 288 aaPredicted RBP20.61■□□□□ 0.89
VSX1-206ENST00000444511 CA5AP35218 305 aa20.61■□□□□ 0.89
VSX1-206ENST00000444511 CSRP3P50461 194 aa20.61■□□□□ 0.89
VSX1-206ENST00000444511 NFE2L1Q14494 772 aa20.61■□□□□ 0.89
VSX1-206ENST00000444511 PTPRCAPQ14761 206 aa20.61■□□□□ 0.89
VSX1-206ENST00000444511 PLCL1Q15111 1095 aa20.61■□□□□ 0.89
VSX1-206ENST00000444511 RPE65Q16518 533 aa20.61■□□□□ 0.89
VSX1-206ENST00000444511 FNBP1LQ5T0N5 605 aa20.61■□□□□ 0.89
VSX1-206ENST00000444511 C16orf46Q6P387 395 aa20.61■□□□□ 0.89
VSX1-206ENST00000444511 CYB5D1Q6P9G0 228 aa20.61■□□□□ 0.89
VSX1-206ENST00000444511 KLHL35Q6PF15 583 aa20.61■□□□□ 0.89
VSX1-206ENST00000444511 FAM83HQ6ZRV2 1179 aaPredicted RBP20.61■□□□□ 0.89
VSX1-206ENST00000444511 CDKL3Q8IVW4 592 aaPredicted RBP20.61■□□□□ 0.89
VSX1-206ENST00000444511 GPR150Q8NGU9 434 aa20.61■□□□□ 0.89
VSX1-206ENST00000444511 KLHL6Q8WZ60 621 aa20.61■□□□□ 0.89
VSX1-206ENST00000444511 STAMBPL1Q96FJ0 436 aa20.61■□□□□ 0.89
VSX1-206ENST00000444511 RAB33BQ9H082 229 aa20.61■□□□□ 0.89
VSX1-206ENST00000444511 ARL5AQ9Y689 179 aa20.61■□□□□ 0.89
VSX1-206ENST00000444511 TERTO14746 1132 aaKnown RBP20.6■□□□□ 0.89
VSX1-206ENST00000444511 STK10O94804 968 aaKnown RBP20.6■□□□□ 0.89
VSX1-206ENST00000444511 KIAA0754O94854 1291 aa20.6■□□□□ 0.89
VSX1-206ENST00000444511 NDUFA10O95299 355 aa20.6■□□□□ 0.89
VSX1-206ENST00000444511 LPOP22079 712 aaPredicted RBP20.6■□□□□ 0.89
VSX1-206ENST00000444511 OAS2P29728 719 aaKnown RBP20.6■□□□□ 0.89
VSX1-206ENST00000444511 CTNNA1P35221 906 aaKnown RBP20.6■□□□□ 0.89
VSX1-206ENST00000444511 DLSTP36957 453 aa20.6■□□□□ 0.89
VSX1-206ENST00000444511 NAP1L1P55209 391 aaKnown RBP20.6■□□□□ 0.89
VSX1-206ENST00000444511 OTUD4Q01804 1114 aaKnown RBP20.6■□□□□ 0.89
VSX1-206ENST00000444511 PRPSAP1Q14558 356 aa20.6■□□□□ 0.89
VSX1-206ENST00000444511 TAF1AQ15573 450 aaPredicted RBP20.6■□□□□ 0.89
VSX1-206ENST00000444511 DEFB109BQ30KR1 87 aa20.6■□□□□ 0.89
VSX1-206ENST00000444511 DET1Q7L5Y6 550 aa20.6■□□□□ 0.89
VSX1-206ENST00000444511 GALNT6Q8NCL4 622 aa20.6■□□□□ 0.89
VSX1-206ENST00000444511 ACTL9Q8TC94 416 aa20.6■□□□□ 0.89
VSX1-206ENST00000444511 APOL2Q9BQE5 337 aa20.6■□□□□ 0.89
VSX1-206ENST00000444511 IMP3Q9NV31 184 aaKnown RBP20.6■□□□□ 0.89
VSX1-206ENST00000444511 LNPEPQ9UIQ6 1025 aa20.6■□□□□ 0.89
VSX1-206ENST00000444511 AAR2Q9Y312 384 aaKnown RBP20.6■□□□□ 0.89
VSX1-206ENST00000444511 PCDHA3Q9Y5H8 950 aa20.6■□□□□ 0.89
VSX1-206ENST00000444511 FLNBO75369 2602 aaKnown RBP20.59■□□□□ 0.89
VSX1-206ENST00000444511 BOD1L1Q8NFC6 3051 aa20.59■□□□□ 0.89
VSX1-206ENST00000444511 IPO7O95373 1038 aaKnown RBP20.59■□□□□ 0.89
VSX1-206ENST00000444511 FGF5P12034 268 aa20.59■□□□□ 0.89
VSX1-206ENST00000444511 NELFEP18615 380 aaKnown RBP20.59■□□□□ 0.89
VSX1-206ENST00000444511 EIF3EP60228 445 aaKnown RBP20.59■□□□□ 0.89
VSX1-206ENST00000444511 PPP1R3BQ86XI6 285 aa20.59■□□□□ 0.89
VSX1-206ENST00000444511 PTRH1Q86Y79 214 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms