RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 KCTD5Q9NXV2 234 aa10.29□□□□□ -0.76
CPNE1-218ENST00000439806 ZIM2Q9NZV7 527 aa10.29□□□□□ -0.76
CPNE1-218ENST00000439806 HECAQ9UBI9 543 aaPredicted RBP10.29□□□□□ -0.76
CPNE1-218ENST00000439806 LEF1Q9UJU2 399 aaPredicted RBP10.29□□□□□ -0.76
CPNE1-218ENST00000439806 INTS6Q9UL03 887 aaKnown RBP10.29□□□□□ -0.76
CPNE1-218ENST00000439806 RAB26Q9ULW5 256 aa10.29□□□□□ -0.76
CPNE1-218ENST00000439806 CLEC4EQ9ULY5 219 aa10.29□□□□□ -0.76
CPNE1-218ENST00000439806 OARD1Q9Y530 152 aa10.29□□□□□ -0.76
CPNE1-218ENST00000439806 PRSS21Q9Y6M0 314 aa10.29□□□□□ -0.76
CPNE1-218ENST00000439806 MYOFQ9NZM1 2061 aa10.29□□□□□ -0.76
CPNE1-218ENST00000439806 TCRBV3S1A0A5B6 114 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 CCDC154A6NI56 674 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 ZNF839A8K0R7 811 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 C9JVG2 144 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 NME4O00746 187 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 DNAJA2O60884 412 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 SLC22A3O75751 556 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 RNASEH2AO75792 299 aaKnown RBP10.28□□□□□ -0.76
CPNE1-218ENST00000439806 GUCA1CO95843 209 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 CAPN1P07384 714 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 ZCCHC18P0CG32 403 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 DDX6P26196 483 aaKnown RBP eCLIP10.28□□□□□ -0.769e-13■■■■□ 25.3
CPNE1-218ENST00000439806 SLC7A1P30825 629 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 CTSOP43234 321 aaPredicted RBP10.28□□□□□ -0.76
CPNE1-218ENST00000439806 HSPA7P48741 367 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 STK19P49842 368 aaPredicted RBP10.28□□□□□ -0.76
CPNE1-218ENST00000439806 POLR2JP52435 117 aaKnown RBP10.28□□□□□ -0.76
CPNE1-218ENST00000439806 ERVPABLB-1P60509 514 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 FOLH1Q04609 750 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 INPP5AQ14642 412 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 PDK3Q15120 406 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 NR6A1Q15406 480 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 CRY1Q16526 586 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 CDKN3Q16667 212 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 LRRC26Q2I0M4 334 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 C18orf21Q32NC0 220 aaPredicted RBP10.28□□□□□ -0.76
CPNE1-218ENST00000439806 SPATS1Q496A3 300 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 CARD16Q5EG05 197 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 DGKKQ5KSL6 1271 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 IRAK1BP1Q5VVH5 260 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 IL23RQ5VWK5 629 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 ZDHHC20Q5W0Z9 365 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 SULT1C3Q6IMI6 304 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 LILRA6Q6PI73 481 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 BLOC1S3Q6QNY0 202 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 CRTC1Q6UUV9 634 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 SBSNQ6UWP8 590 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 CYP2R1Q6VVX0 501 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 MILR1Q7Z6M3 343 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 TSPAN33Q86UF1 283 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 CMTM8Q8IZV2 173 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 NXPE1Q8N323 547 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 CHCHD4Q8N4Q1 142 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 ZNF557Q8N988 423 aaPredicted RBP10.28□□□□□ -0.76
CPNE1-218ENST00000439806 OR4F6Q8NGB9 312 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 OR2T34Q8NGX1 318 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 OR2T3Q8NH03 318 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 ZUFSPQ96AP4 578 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 ISG20Q96AZ6 181 aaKnown RBP10.28□□□□□ -0.76
CPNE1-218ENST00000439806 LRRC58Q96CX6 371 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 DUS3LQ96G46 650 aaKnown RBP10.28□□□□□ -0.76
CPNE1-218ENST00000439806 LYSMD1Q96S90 227 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 GPATCH1Q9BRR8 931 aaKnown RBP10.28□□□□□ -0.76
CPNE1-218ENST00000439806 SLC39A3Q9BRY0 314 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 C17orf80Q9BSJ5 609 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 C1orf50Q9BV19 199 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 SLC46A2Q9BY10 475 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 SMG9Q9H0W8 520 aaKnown RBP10.28□□□□□ -0.76
CPNE1-218ENST00000439806 MUC13Q9H3R2 512 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 IL26Q9NPH9 171 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 TMEM45AQ9NWC5 275 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 ZDHHC3Q9NYG2 299 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 MAP10Q9P2G4 905 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 ABCD2Q9UBJ2 740 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 OPTCQ9UBM4 332 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 CNOT6Q9ULM6 557 aaKnown RBP10.28□□□□□ -0.76
CPNE1-218ENST00000439806 ASB1Q9Y576 335 aa10.28□□□□□ -0.76
CPNE1-218ENST00000439806 UTRNP46939 3433 aa10.27□□□□□ -0.76
CPNE1-218ENST00000439806 C15orf38-AP3S2A0A0A6YYH1 394 aa10.27□□□□□ -0.77
CPNE1-218ENST00000439806 A0A1W2PP18 115 aa10.27□□□□□ -0.77
CPNE1-218ENST00000439806 A0A1W2PQ67 120 aa10.27□□□□□ -0.77
CPNE1-218ENST00000439806 FAM234BA2RU67 622 aa10.27□□□□□ -0.77
CPNE1-218ENST00000439806 TRIM43BA6NCK2 446 aa10.27□□□□□ -0.77
CPNE1-218ENST00000439806 PABPN1LA6NDY0 278 aaKnown RBP10.27□□□□□ -0.77
CPNE1-218ENST00000439806 NPIPB15A6NHN6 443 aaPredicted RBP10.27□□□□□ -0.77
CPNE1-218ENST00000439806 OR7A17O14581 309 aa10.27□□□□□ -0.77
CPNE1-218ENST00000439806 KIAA0355O15063 1070 aa10.27□□□□□ -0.77
CPNE1-218ENST00000439806 DENRO43583 198 aaKnown RBP10.27□□□□□ -0.77
CPNE1-218ENST00000439806 KATNA1O75449 491 aa10.27□□□□□ -0.77
CPNE1-218ENST00000439806 EEDO75530 441 aaKnown RBP10.27□□□□□ -0.77
CPNE1-218ENST00000439806 CSPG5O95196 566 aa10.27□□□□□ -0.77
CPNE1-218ENST00000439806 POP4O95707 220 aaKnown RBP10.27□□□□□ -0.77
CPNE1-218ENST00000439806 CBSLP0DN79 551 aa10.27□□□□□ -0.77
CPNE1-218ENST00000439806 PABPC1P11940 636 aaKnown RBP10.27□□□□□ -0.77
CPNE1-218ENST00000439806 HSD17B1P14061 328 aa10.27□□□□□ -0.77
CPNE1-218ENST00000439806 ATP6V1B2P21281 511 aa10.27□□□□□ -0.77
CPNE1-218ENST00000439806 CA5AP35218 305 aa10.27□□□□□ -0.77
CPNE1-218ENST00000439806 CBSP35520 551 aa10.27□□□□□ -0.77
CPNE1-218ENST00000439806 NSG1P42857 185 aa10.27□□□□□ -0.77
CPNE1-218ENST00000439806 RECQLP46063 649 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms