RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 PLXDC1Q8IUK5 500 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 RBM12BQ8IXT5 1001 aaKnown RBP11.01□□□□□ -0.65
RFFL-204ENST00000414419 NXPE1Q8N323 547 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 BEND7Q8N7W2 519 aaPredicted RBP11.01□□□□□ -0.65
RFFL-204ENST00000414419 AGBL5Q8NDL9 886 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 OR52K1Q8NGK4 314 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 SGF29Q96ES7 293 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 DNAJC1Q96KC8 554 aaKnown RBP11.01□□□□□ -0.65
RFFL-204ENST00000414419 COPS8Q99627 209 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 TBC1D10AQ9BXI6 508 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 TLR10Q9BXR5 811 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 FAM96AQ9H5X1 160 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 POT1Q9NUX5 634 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 NLE1Q9NVX2 485 aaPredicted RBP11.01□□□□□ -0.65
RFFL-204ENST00000414419 SCHIP1Q9P0W5 487 aaPredicted RBP11.01□□□□□ -0.65
RFFL-204ENST00000414419 ZNF624Q9P2J8 865 aaPredicted RBP11.01□□□□□ -0.65
RFFL-204ENST00000414419 DRG1Q9Y295 367 aaKnown RBP11.01□□□□□ -0.65
RFFL-204ENST00000414419 JRKLQ9Y4A0 524 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 PCDHGA7Q9Y5G6 932 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 CELSR3Q9NYQ7 3312 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 AHCTF1Q8WYP5 2266 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 PTPRQQ9UMZ3 2332 aa11.01□□□□□ -0.65
RFFL-204ENST00000414419 BPTFQ12830 3046 aa11□□□□□ -0.65
RFFL-204ENST00000414419 CCDC78A2IDD5 438 aa11□□□□□ -0.65
RFFL-204ENST00000414419 HEATR9A2RTY3 570 aa11□□□□□ -0.65
RFFL-204ENST00000414419 MGAT4DA6NG13 374 aa11□□□□□ -0.65
RFFL-204ENST00000414419 LILRA5A6NI73 299 aa11□□□□□ -0.65
RFFL-204ENST00000414419 OR52A4PA6NMU1 304 aa11□□□□□ -0.65
RFFL-204ENST00000414419 A8MU76 341 aa11□□□□□ -0.65
RFFL-204ENST00000414419 CCL22O00626 93 aa11□□□□□ -0.65
RFFL-204ENST00000414419 NVLO15381 856 aaKnown RBP11□□□□□ -0.65
RFFL-204ENST00000414419 APRTP07741 180 aa11□□□□□ -0.65
RFFL-204ENST00000414419 THRAP10827 490 aa11□□□□□ -0.65
RFFL-204ENST00000414419 ATP1B2P14415 290 aaPredicted RBP11□□□□□ -0.65
RFFL-204ENST00000414419 BRAFP15056 766 aa11□□□□□ -0.65
RFFL-204ENST00000414419 MSNP26038 577 aaKnown RBP11□□□□□ -0.65
RFFL-204ENST00000414419 CSF2RBP32927 897 aa11□□□□□ -0.65
RFFL-204ENST00000414419 CA5AP35218 305 aa11□□□□□ -0.65
RFFL-204ENST00000414419 UBE2IP63279 158 aaKnown RBP11□□□□□ -0.65
RFFL-204ENST00000414419 TLE3Q04726 772 aa11□□□□□ -0.65
RFFL-204ENST00000414419 DMPKQ09013 629 aa11□□□□□ -0.65
RFFL-204ENST00000414419 NFE2L1Q14494 772 aa11□□□□□ -0.65
RFFL-204ENST00000414419 ZNF449Q6P9G9 518 aa11□□□□□ -0.65
RFFL-204ENST00000414419 DRICH1Q6PGQ1 229 aaPredicted RBP11□□□□□ -0.65
RFFL-204ENST00000414419 PDZD3Q86UT5 571 aa11□□□□□ -0.65
RFFL-204ENST00000414419 OR2L2Q8NH16 312 aa11□□□□□ -0.65
RFFL-204ENST00000414419 USP7Q93009 1102 aa11□□□□□ -0.65
RFFL-204ENST00000414419 CDKN2AIPNLQ96HQ2 116 aa11□□□□□ -0.65
RFFL-204ENST00000414419 VPS37BQ9H9H4 285 aa11□□□□□ -0.65
RFFL-204ENST00000414419 UCK1Q9HA47 277 aa11□□□□□ -0.65
RFFL-204ENST00000414419 ZDHHC3Q9NYG2 299 aa11□□□□□ -0.65
RFFL-204ENST00000414419 TMEM9Q9P0T7 183 aa11□□□□□ -0.65
RFFL-204ENST00000414419 FAM8A1Q9UBU6 413 aa11□□□□□ -0.65
RFFL-204ENST00000414419 KLHL3Q9UH77 587 aa11□□□□□ -0.65
RFFL-204ENST00000414419 ACSL5Q9ULC5 683 aa11□□□□□ -0.65
RFFL-204ENST00000414419 PSMD13Q9UNM6 376 aa11□□□□□ -0.65
RFFL-204ENST00000414419 PRR19A6NJB7 356 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 AGAP14A8MT82 685 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 H7C0S8 307 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 UBXN7O94888 489 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 SUN1O94901 812 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 SLC35G4P0C7Q5 338 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 TYRP1P17643 537 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 ADRA1DP25100 572 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 ACRV1P26436 265 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 ETV5P41161 510 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 TMPRSS3P57727 454 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 CXADRP78310 365 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 BASP1P80723 227 aaKnown RBP10.99□□□□□ -0.65
RFFL-204ENST00000414419 CFHR1Q03591 330 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 CACNG1Q06432 222 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 SEMA5AQ13591 1074 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 GSE1Q14687 1217 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 CLCA4Q14CN2 919 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 SIX1Q15475 284 aaPredicted RBP10.99□□□□□ -0.65
RFFL-204ENST00000414419 BCL7AQ4VC05 210 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 CCDC38Q502W7 563 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 METRNLQ641Q3 311 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 NLRP9Q7RTR0 991 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 PRUNE1Q86TP1 453 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 SERPINA9Q86WD7 417 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 FAM129CQ86XR2 697 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 CFAP206Q8IYR0 622 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.99□□□□□ -0.65
RFFL-204ENST00000414419 PBKQ96KB5 322 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 FCRL3Q96P31 734 aaPredicted RBP10.99□□□□□ -0.65
RFFL-204ENST00000414419 TAAR9Q96RI9 348 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 NAP1L3Q99457 506 aaPredicted RBP10.99□□□□□ -0.65
RFFL-204ENST00000414419 TTC1Q99614 292 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 SLC40A1Q9NP59 571 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 SLC39A1Q9NY26 324 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 RALYQ9UKM9 306 aaKnown RBP10.99□□□□□ -0.65
RFFL-204ENST00000414419 WDR37Q9Y2I8 494 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 PCDHB11Q9Y5F2 797 aa10.99□□□□□ -0.65
RFFL-204ENST00000414419 PRAMEF33A0A0G2JMD5 474 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 MROH6A6NGR9 719 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 EFCAB7A8K855 629 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 AP3B1O00203 1094 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 PRAMEF10O60809 474 aa10.98□□□□□ -0.65
RFFL-204ENST00000414419 POLBP06746 335 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms