RNA–Protein interactions for RNA: ENST00000401959.5

SNU13-203, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNU13, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-203ENST00000401959 CDK14O94921 469 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 MLYCDO95822 493 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 TSPAN8P19075 237 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 SH3BP2P78314 561 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 RALGDSQ12967 914 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 RUNX3Q13761 415 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 TGFBIQ15582 683 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 ATAT1Q5SQI0 421 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 CAPRIN2Q6IMN6 1127 aaKnown RBP12.89□□□□□ -0.35
SNU13-203ENST00000401959 PARS2Q7L3T8 475 aaKnown RBP12.89□□□□□ -0.35
SNU13-203ENST00000401959 RAVER1Q8IY67 606 aaKnown RBP12.89□□□□□ -0.35
SNU13-203ENST00000401959 PHTF2Q8N3S3 785 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 TRAM1L1Q8N609 369 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 ZNF366Q8N895 744 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 RBM15BQ8NDT2 890 aaKnown RBP12.89□□□□□ -0.35
SNU13-203ENST00000401959 FAM13CQ8NE31 585 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 TRPC4APQ8TEL6 797 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 DCUN1D1Q96GG9 259 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 ZSCAN5AQ9BUG6 496 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 ZNF385DQ9H6B1 395 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 TNFRSF12AQ9NP84 129 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 CD84Q9UIB8 345 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 CDH22Q9UJ99 828 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 TNPO3Q9Y5L0 923 aaKnown RBP12.89□□□□□ -0.35
SNU13-203ENST00000401959 TCF20Q9UGU0 1960 aaKnown RBP12.89□□□□□ -0.35
SNU13-203ENST00000401959 DENND4AQ7Z401 1863 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 ANKRD12Q6UB98 2062 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 LRRC14BA6NHZ5 514 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 NCF1BA6NI72 391 aaPredicted RBP12.89□□□□□ -0.35
SNU13-203ENST00000401959 NCF1CA8MVU1 366 aaPredicted RBP12.89□□□□□ -0.35
SNU13-203ENST00000401959 KPNA3O00505 521 aaPredicted RBP12.89□□□□□ -0.35
SNU13-203ENST00000401959 THRAP10827 490 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 COX4I1P13073 169 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 ENO3P13929 434 aaPredicted RBP12.89□□□□□ -0.35
SNU13-203ENST00000401959 NCF1P14598 390 aaPredicted RBP12.89□□□□□ -0.35
SNU13-203ENST00000401959 ITGB7P26010 798 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 PIK3R1P27986 724 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 PGM1P36871 562 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 MMP12P39900 470 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 EIF2DP41214 584 aaKnown RBP12.89□□□□□ -0.35
SNU13-203ENST00000401959 HK3P52790 923 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 MESP2Q0VG99 397 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 CDC16Q13042 620 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 ELAVL3Q14576 367 aaKnown RBP12.89□□□□□ -0.35
SNU13-203ENST00000401959 ZNF234Q14588 700 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 ZRSR2Q15696 482 aaKnown RBP12.89□□□□□ -0.35
SNU13-203ENST00000401959 ZNF284Q2VY69 593 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 ACSBG2Q5FVE4 666 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 WASHC2DQ5SRD0 308 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 C9orf64Q5T6V5 341 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 KANK2Q63ZY3 851 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 CES5AQ6NT32 575 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 SBSNQ6UWP8 590 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 EFL1Q7Z2Z2 1120 aaKnown RBP12.89□□□□□ -0.35
SNU13-203ENST00000401959 NRSN1Q8IZ57 195 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 OR56A4Q8NGH8 313 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 PPP1R16AQ96I34 528 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 NSUN5Q96P11 429 aaKnown RBP12.89□□□□□ -0.35
SNU13-203ENST00000401959 CATSPER2Q96P56 530 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 SH3GL3Q99963 347 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 PCTPQ9UKL6 214 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 OARD1Q9Y530 152 aa12.89□□□□□ -0.35
SNU13-203ENST00000401959 TBC1D3BA6NDS4 549 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 A6NHS1 94 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 H0Y858 1186 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 GIPC1O14908 333 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 KPNA5O15131 536 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 CRCPO75575 148 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 ELFN1P0C7U0 828 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 ATP1B2P14415 290 aaPredicted RBP12.88□□□□□ -0.35
SNU13-203ENST00000401959 PSMC3P17980 439 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 AKT1P31749 480 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 OPRD1P41143 372 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 B4GALNT1Q00973 533 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 ELP6Q0PNE2 266 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 HERC3Q15034 1050 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 PCBP2Q15366 365 aaKnown RBP eCLIP12.88□□□□□ -0.357e-15■■□□□ 14.2
SNU13-203ENST00000401959 UGT3A2Q3SY77 523 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 HENMT1Q5T8I9 393 aaKnown RBP12.88□□□□□ -0.35
SNU13-203ENST00000401959 CLEC6AQ6EIG7 209 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 SERPINA13PQ6UXR4 307 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 LIPIQ6XZB0 460 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 Q6ZVL8 140 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 TECPR1Q7Z6L1 1165 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 PELI3Q8N2H9 469 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 POU5F2Q8N7G0 328 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 PDPRQ8NCN5 879 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 RP9Q8TA86 221 aaKnown RBP12.88□□□□□ -0.35
SNU13-203ENST00000401959 PIP4K2CQ8TBX8 421 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 ELSPBP1Q96BH3 223 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 SPDL1Q96EA4 605 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 ZNF570Q96NI8 536 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 NUSAP1Q9BXS6 441 aaKnown RBP12.88□□□□□ -0.35
SNU13-203ENST00000401959 TMEM245Q9H330 911 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 SEMA4BQ9NPR2 832 aaPredicted RBP12.88□□□□□ -0.35
SNU13-203ENST00000401959 TMPRSS11EQ9UL52 423 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 LRRC42Q9Y546 428 aa12.88□□□□□ -0.35
SNU13-203ENST00000401959 A8MUI8 341 aa12.87□□□□□ -0.35
SNU13-203ENST00000401959 QSOX1O00391 747 aa12.87□□□□□ -0.35
SNU13-203ENST00000401959 FFAR2O15552 330 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms