RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 CCR4P51679 360 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 SLC7A2P52569 658 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 HK2P52789 917 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 FGD3Q5JSP0 725 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 SLC8B1Q6J4K2 584 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 RTN4RL1Q86UN2 441 aaPredicted RBP12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 TRIM74Q86UV6 250 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 ZSCAN5AQ9BUG6 496 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 BDH2Q9BUT1 245 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 KIFC1Q9BW19 673 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 BTBD1Q9H0C5 482 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 SEMA6AQ9H2E6 1030 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 EXOSC4Q9NPD3 245 aaKnown RBP12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 PHIPQ8WWQ0 1821 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 FCGR1AP12314 374 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 RAD23AP54725 363 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 CREB5Q02930 508 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 TMEM173Q86WV6 379 aaPredicted RBP12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 MRPL43Q8N983 215 aaKnown RBP12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 WDR48Q8TAF3 677 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 P2RY13Q9BPV8 354 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 ADAM7Q9H2U9 754 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 SPAG4Q9NPE6 437 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 EGFL7Q9UHF1 273 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 PRKAB1Q9Y478 270 aa12.95□□□□□ -0.34
PTPRN2-202ENST00000389416 TCEA3O75764 348 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 CDH3P22223 829 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 RPL10P27635 214 aaKnown RBP12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 UBE3AQ05086 875 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 DSC1Q08554 894 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 INO80DQ53TQ3 878 aaPredicted RBP12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 SMYD5Q6GMV2 418 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 TMEM154Q6P9G4 183 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 IYDQ6PHW0 289 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 MRGPRX2Q96LB1 330 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 NRP2O60462 931 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 ENTPD5O75356 428 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 POP7O75817 140 aaKnown RBP12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 KAT7O95251 611 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 C8GP07360 202 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 ZCCHC18P0CG32 403 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 CD70P32970 193 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 PEX6Q13608 980 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 GPR135Q8IZ08 494 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 UTP15Q8TED0 518 aaKnown RBP12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 CENPIQ92674 756 aaPredicted RBP12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 PPCDCQ96CD2 204 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 PPM1MQ96MI6 270 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 ZNF778Q96MU6 729 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 MMADHCQ9H3L0 296 aaPredicted RBP12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 DLGAP2Q9P1A6 1054 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 COQ6Q9Y2Z9 468 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 SMNDC1O75940 238 aaKnown RBP eCLIP12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 GSNP06396 782 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 PSMC3P17980 439 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 ATP6V1C1P21283 382 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 FAM26DQ5JW98 314 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 KIAA0319Q5VV43 1072 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 ZFP28Q8NHY6 868 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 TSC22D3Q99576 134 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 HCFC2Q9Y5Z7 792 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 ACTL7AQ9Y615 435 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 CDC7O00311 574 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 PGLSO95336 258 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 TRBC1P01850 177 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 CLCNKAP51800 687 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 STC1P52823 247 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 CSTF3Q12996 717 aaKnown RBP12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 SIX1Q15475 284 aaPredicted RBP12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 GPRC6AQ5T6X5 926 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 RP1L1Q8IWN7 2480 aaPredicted RBP12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 TMEM174Q8WUU8 243 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 PROX1Q92786 737 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 LMLNQ96KR4 655 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 MTERF1Q99551 399 aaKnown RBP12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 UGT2B28Q9BY64 529 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 KLHL4Q9C0H6 718 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 OGDHLQ9ULD0 1010 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 MAPRE3Q9UPY8 281 aa12.94□□□□□ -0.34
PTPRN2-202ENST00000389416 OR1F1O43749 312 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 ZNF30P17039 623 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 GNAZP19086 355 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 CCNYL2Q5T2Q4 361 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 AP1ARQ63HQ0 302 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 SLC30A9Q6PML9 568 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 CILP2Q8IUL8 1156 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 UBR7Q8N806 425 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 OSER1Q9NX31 292 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 PIP5K1BO14986 540 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 SIN3BO75182 1162 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 TULP3O75386 442 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 ACADSP16219 412 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 OCA2Q04671 838 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 NIPAL4Q0D2K0 466 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 EEF1AKMT1Q8WVE0 214 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 TCEAL4Q96EI5 215 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 OLFM3Q96PB7 478 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 CDK15Q96Q40 435 aa12.93□□□□□ -0.34
PTPRN2-202ENST00000389416 TFB2MQ9H5Q4 396 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms