RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 LIMK2P53671 638 aa20.3■□□□□ 0.84
HIF1A-206ENST00000553999 ITGA9Q13797 1035 aa20.3■□□□□ 0.84
HIF1A-206ENST00000553999 POU6F1Q14863 301 aa20.3■□□□□ 0.84
HIF1A-206ENST00000553999 KIR2DS5Q14953 304 aa20.3■□□□□ 0.84
HIF1A-206ENST00000553999 DENND5AQ6IQ26 1287 aa20.3■□□□□ 0.84
HIF1A-206ENST00000553999 IGF2-ASQ6U949 168 aa20.3■□□□□ 0.84
HIF1A-206ENST00000553999 FAM83HQ6ZRV2 1179 aaPredicted RBP20.3■□□□□ 0.84
HIF1A-206ENST00000553999 VASH2Q86V25 355 aa20.3■□□□□ 0.84
HIF1A-206ENST00000553999 DDHD1Q8NEL9 900 aa20.3■□□□□ 0.84
HIF1A-206ENST00000553999 OR4D9Q8NGE8 314 aa20.3■□□□□ 0.84
HIF1A-206ENST00000553999 SLC35B2Q8TB61 432 aa20.3■□□□□ 0.84
HIF1A-206ENST00000553999 ART4Q93070 314 aa20.3■□□□□ 0.84
HIF1A-206ENST00000553999 DNAJC1Q96KC8 554 aaKnown RBP20.3■□□□□ 0.84
HIF1A-206ENST00000553999 TIMM29Q9BSF4 260 aa20.3■□□□□ 0.84
HIF1A-206ENST00000553999 OCIAD1Q9NX40 245 aa20.3■□□□□ 0.84
HIF1A-206ENST00000553999 ZNF624Q9P2J8 865 aaPredicted RBP20.3■□□□□ 0.84
HIF1A-206ENST00000553999 CRLS1Q9UJA2 301 aa20.3■□□□□ 0.84
HIF1A-206ENST00000553999 WDR37Q9Y2I8 494 aa20.3■□□□□ 0.84
HIF1A-206ENST00000553999 ITPR1Q14643 2758 aa20.3■□□□□ 0.84
HIF1A-206ENST00000553999 EFCAB7A8K855 629 aa20.29■□□□□ 0.84
HIF1A-206ENST00000553999 C9orf172C9J069 976 aa20.29■□□□□ 0.84
HIF1A-206ENST00000553999 POP7O75817 140 aaKnown RBP20.29■□□□□ 0.84
HIF1A-206ENST00000553999 PRSS56P0CW18 603 aa20.29■□□□□ 0.84
HIF1A-206ENST00000553999 THRAP10827 490 aa20.29■□□□□ 0.84
HIF1A-206ENST00000553999 ETS1P14921 441 aa20.29■□□□□ 0.84
HIF1A-206ENST00000553999 BRAFP15056 766 aa20.29■□□□□ 0.84
HIF1A-206ENST00000553999 IDSP22304 550 aa20.29■□□□□ 0.84
HIF1A-206ENST00000553999 CSTF2P33240 577 aaKnown RBP eCLIP20.29■□□□□ 0.84
HIF1A-206ENST00000553999 SLC19A1P41440 591 aa20.29■□□□□ 0.84
HIF1A-206ENST00000553999 GFERP55789 205 aa20.29■□□□□ 0.84
HIF1A-206ENST00000553999 TMPRSS3P57727 454 aa20.29■□□□□ 0.84
HIF1A-206ENST00000553999 GPLD1P80108 840 aa20.29■□□□□ 0.84
HIF1A-206ENST00000553999 NFE2L1Q14494 772 aa20.29■□□□□ 0.84
HIF1A-206ENST00000553999 SOWAHCQ53LP3 525 aaPredicted RBP20.29■□□□□ 0.84
HIF1A-206ENST00000553999 LDLRAP1Q5SW96 308 aa20.29■□□□□ 0.84
HIF1A-206ENST00000553999 ZDHHC20Q5W0Z9 365 aa20.29■□□□□ 0.84
HIF1A-206ENST00000553999 C11orf96Q7Z7L8 435 aa20.29■□□□□ 0.84
HIF1A-206ENST00000553999 RNF10Q8N5U6 811 aaKnown RBP20.29■□□□□ 0.84
HIF1A-206ENST00000553999 CXorf40BQ96DE9 158 aa20.29■□□□□ 0.84
HIF1A-206ENST00000553999 SGF29Q96ES7 293 aa20.29■□□□□ 0.84
HIF1A-206ENST00000553999 CTRCQ99895 268 aa20.29■□□□□ 0.84
HIF1A-206ENST00000553999 ZCCHC2Q9C0B9 1178 aaKnown RBP20.29■□□□□ 0.84
HIF1A-206ENST00000553999 CFAP20Q9Y6A4 193 aaKnown RBP20.29■□□□□ 0.84
HIF1A-206ENST00000553999 GPR89AB7ZAQ6 455 aa20.28■□□□□ 0.84
HIF1A-206ENST00000553999 SRP72O76094 671 aaKnown RBP20.28■□□□□ 0.84
HIF1A-206ENST00000553999 CRTAMO95727 393 aa20.28■□□□□ 0.84
HIF1A-206ENST00000553999 CCDC175P0C221 793 aa20.28■□□□□ 0.84
HIF1A-206ENST00000553999 GPR89BP0CG08 455 aa20.28■□□□□ 0.84
HIF1A-206ENST00000553999 FGF3P11487 239 aaPredicted RBP20.28■□□□□ 0.84
HIF1A-206ENST00000553999 CDKN1CP49918 316 aaPredicted RBP20.28■□□□□ 0.84
HIF1A-206ENST00000553999 ZNF140P52738 457 aaPredicted RBP20.28■□□□□ 0.84
HIF1A-206ENST00000553999 UBE2IP63279 158 aaKnown RBP20.28■□□□□ 0.84
HIF1A-206ENST00000553999 CLCA4Q14CN2 919 aa20.28■□□□□ 0.84
HIF1A-206ENST00000553999 RPS6KA1Q15418 735 aa20.28■□□□□ 0.84
HIF1A-206ENST00000553999 PARP6Q2NL67 630 aa20.28■□□□□ 0.84
HIF1A-206ENST00000553999 ZRANB3Q5FWF4 1079 aa20.28■□□□□ 0.84
HIF1A-206ENST00000553999 DUS1LQ6P1R4 473 aaKnown RBP20.28■□□□□ 0.84
HIF1A-206ENST00000553999 TMEM71Q6P5X7 295 aa20.28■□□□□ 0.84
HIF1A-206ENST00000553999 GPR155Q7Z3F1 870 aa20.28■□□□□ 0.84
HIF1A-206ENST00000553999 SLC13A5Q86YT5 568 aaPredicted RBP20.28■□□□□ 0.84
HIF1A-206ENST00000553999 GPR150Q8NGU9 434 aa20.28■□□□□ 0.84
HIF1A-206ENST00000553999 SH3KBP1Q96B97 665 aa20.28■□□□□ 0.84
HIF1A-206ENST00000553999 SLC30A1Q9Y6M5 507 aa20.28■□□□□ 0.84
HIF1A-206ENST00000553999 LIASO43766 372 aa20.27■□□□□ 0.84
HIF1A-206ENST00000553999 PRB1P04280 392 aa20.27■□□□□ 0.84
HIF1A-206ENST00000553999 VCLP18206 1134 aa20.27■□□□□ 0.84
HIF1A-206ENST00000553999 MC4RP32245 332 aa20.27■□□□□ 0.84
HIF1A-206ENST00000553999 LMAN1P49257 510 aa20.27■□□□□ 0.84
HIF1A-206ENST00000553999 MSLNQ13421 630 aaPredicted RBP20.27■□□□□ 0.84
HIF1A-206ENST00000553999 CCDC38Q502W7 563 aa20.27■□□□□ 0.84
HIF1A-206ENST00000553999 KIAA1614Q5VZ46 1190 aa20.27■□□□□ 0.84
HIF1A-206ENST00000553999 AMZ2Q86W34 360 aa20.27■□□□□ 0.84
HIF1A-206ENST00000553999 LRRC8AQ8IWT6 810 aa20.27■□□□□ 0.84
HIF1A-206ENST00000553999 AGBL5Q8NDL9 886 aa20.27■□□□□ 0.84
HIF1A-206ENST00000553999 CCDC112Q8NEF3 446 aa20.27■□□□□ 0.84
HIF1A-206ENST00000553999 BRSK1Q8TDC3 778 aa20.27■□□□□ 0.84
HIF1A-206ENST00000553999 LRRC45Q96CN5 670 aa20.27■□□□□ 0.84
HIF1A-206ENST00000553999 TGM7Q96PF1 710 aa20.27■□□□□ 0.84
HIF1A-206ENST00000553999 LRRC40Q9H9A6 602 aa20.27■□□□□ 0.84
HIF1A-206ENST00000553999 SLC39A1Q9NY26 324 aa20.27■□□□□ 0.84
HIF1A-206ENST00000553999 ZNF148Q9UQR1 794 aa20.27■□□□□ 0.84
HIF1A-206ENST00000553999 PCDHGA7Q9Y5G6 932 aa20.27■□□□□ 0.84
HIF1A-206ENST00000553999 OR5K4A6NMS3 321 aa20.26■□□□□ 0.83
HIF1A-206ENST00000553999 AMD1P17707 334 aa20.26■□□□□ 0.83
HIF1A-206ENST00000553999 MLLT3P42568 568 aaPredicted RBP20.26■□□□□ 0.83
HIF1A-206ENST00000553999 CLCNKAP51800 687 aa20.26■□□□□ 0.83
HIF1A-206ENST00000553999 TERF1P54274 439 aa20.26■□□□□ 0.83
HIF1A-206ENST00000553999 CCZ1BP86790 482 aa20.26■□□□□ 0.83
HIF1A-206ENST00000553999 CCZ1P86791 482 aaPredicted RBP20.26■□□□□ 0.83
HIF1A-206ENST00000553999 XIAPP98170 497 aa20.26■□□□□ 0.83
HIF1A-206ENST00000553999 GPR18Q14330 331 aa20.26■□□□□ 0.83
HIF1A-206ENST00000553999 P3H1Q32P28 736 aa20.26■□□□□ 0.83
HIF1A-206ENST00000553999 MEI1Q5TIA1 1274 aa20.26■□□□□ 0.83
HIF1A-206ENST00000553999 KCTD11Q693B1 232 aa20.26■□□□□ 0.83
HIF1A-206ENST00000553999 CCDC81Q6ZN84 652 aa20.26■□□□□ 0.83
HIF1A-206ENST00000553999 TMEM26Q6ZUK4 368 aa20.26■□□□□ 0.83
HIF1A-206ENST00000553999 TAS2R42Q7RTR8 314 aa20.26■□□□□ 0.83
HIF1A-206ENST00000553999 OR52K1Q8NGK4 314 aa20.26■□□□□ 0.83
HIF1A-206ENST00000553999 TMEM159Q96B96 161 aa20.26■□□□□ 0.83
HIF1A-206ENST00000553999 ALS2CR12Q96Q35 445 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms