RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 IGHV5-51A0A0C4DH38 117 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 UBA6A0AVT1 1052 aaPredicted RBP16.59■□□□□ 0.25
VPS29-204ENST00000548259 OR52A4PA6NMU1 304 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 KLHL41O60662 606 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 KCNJ13O60928 360 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 SCRG1O75711 98 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 CEACAM4O75871 244 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 TMEM63AO94886 807 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 MX2P20592 715 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 COL8A1P27658 744 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 PTGIRP43119 386 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 TUBB4BP68371 445 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 IL10RAQ13651 578 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 TUBB2AQ13885 445 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 PLCL1Q15111 1095 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 ASIC2Q16515 512 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 QPCTQ16769 361 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 ZRANB3Q5FWF4 1079 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 DNTTIP2Q5QJE6 756 aaKnown RBP16.59■□□□□ 0.25
VPS29-204ENST00000548259 ALS2CLQ60I27 953 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 SLC6A19Q695T7 634 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 SLC34A3Q8N130 599 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 TTC13Q8NBP0 860 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 ARRDC2Q8TBH0 407 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 MOCOSQ96EN8 888 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 TSGA13Q96PP4 275 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 SYT11Q9BT88 431 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 TUBB2BQ9BVA1 445 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 NUP85Q9BW27 656 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 MFRPQ9BY79 579 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 XPO4Q9C0E2 1151 aaKnown RBP16.59■□□□□ 0.25
VPS29-204ENST00000548259 FANCEQ9HB96 536 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 KCND1Q9NSA2 647 aa16.59■□□□□ 0.25
VPS29-204ENST00000548259 ABCA12Q86UK0 2595 aa16.58■□□□□ 0.25
VPS29-204ENST00000548259 WIPF3A6NGB9 483 aa16.58■□□□□ 0.24
VPS29-204ENST00000548259 TLCD2A6NGC4 264 aa16.58■□□□□ 0.24
VPS29-204ENST00000548259 LDLRP01130 860 aa16.58■□□□□ 0.24
VPS29-204ENST00000548259 RAB40ALP0C0E4 278 aa16.58■□□□□ 0.24
VPS29-204ENST00000548259 FECHP22830 423 aa16.58■□□□□ 0.24
VPS29-204ENST00000548259 ELAVL4P26378 380 aaKnown RBP16.58■□□□□ 0.24
VPS29-204ENST00000548259 TNFRSF8P28908 595 aa16.58■□□□□ 0.24
VPS29-204ENST00000548259 SSR1P43307 286 aaKnown RBP16.58■□□□□ 0.24
VPS29-204ENST00000548259 DRG2P55039 364 aaKnown RBP16.58■□□□□ 0.24
VPS29-204ENST00000548259 KCNAB1Q14722 419 aa16.58■□□□□ 0.24
VPS29-204ENST00000548259 HADHQ16836 314 aaKnown RBP16.58■□□□□ 0.24
VPS29-204ENST00000548259 ZNF648Q5T619 568 aaPredicted RBP16.58■□□□□ 0.24
VPS29-204ENST00000548259 ARMC6Q6NXE6 501 aa16.58■□□□□ 0.24
VPS29-204ENST00000548259 TRAPPC5Q8IUR0 188 aa16.58■□□□□ 0.24
VPS29-204ENST00000548259 SRPK1Q96SB4 655 aaKnown RBP16.58■□□□□ 0.24
VPS29-204ENST00000548259 GPR63Q9BZJ6 419 aa16.58■□□□□ 0.24
VPS29-204ENST00000548259 LUZP4Q9P127 313 aa16.58■□□□□ 0.24
VPS29-204ENST00000548259 NFKBIL1Q9UBC1 381 aaPredicted RBP16.58■□□□□ 0.24
VPS29-204ENST00000548259 IP6K2Q9UHH9 426 aa16.58■□□□□ 0.24
VPS29-204ENST00000548259 LRRC10BA6NIK2 292 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 ZNF185O15231 689 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 MFSD11O43934 449 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 CLDN1O95832 211 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 ALPPP05187 535 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 EBLN1P0CF75 366 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 BRAFP15056 766 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 CD86P42081 329 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 VAV2P52735 878 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 MYL5Q02045 173 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 NAA30Q147X3 362 aaPredicted RBP16.57■□□□□ 0.24
VPS29-204ENST00000548259 PRR30Q53SZ7 412 aaPredicted RBP16.57■□□□□ 0.24
VPS29-204ENST00000548259 CCDC70Q6NSX1 233 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 CARFQ8N187 725 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 CCNYQ8ND76 341 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 FDCSPQ8NFU4 85 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 GDAP1Q8TB36 358 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 CPT1BQ92523 772 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 ZNF830Q96NB3 372 aaPredicted RBP16.57■□□□□ 0.24
VPS29-204ENST00000548259 LRFN5Q96NI6 719 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 PHF12Q96QT6 1004 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 RUFY1Q96T51 708 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 ZCCHC2Q9C0B9 1178 aaKnown RBP16.57■□□□□ 0.24
VPS29-204ENST00000548259 HAUS4Q9H6D7 363 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 C5AR2Q9P296 337 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 TRIM10Q9UDY6 481 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 ERRFI1Q9UJM3 462 aaPredicted RBP16.57■□□□□ 0.24
VPS29-204ENST00000548259 CELSR2Q9HCU4 2923 aa16.57■□□□□ 0.24
VPS29-204ENST00000548259 A6NL46 340 aa16.56■□□□□ 0.24
VPS29-204ENST00000548259 MAP3K7O43318 606 aa16.56■□□□□ 0.24
VPS29-204ENST00000548259 ZBTB11O95625 1053 aaPredicted RBP16.56■□□□□ 0.24
VPS29-204ENST00000548259 SLC4A1P02730 911 aa16.56■□□□□ 0.24
VPS29-204ENST00000548259 HLA-DQB2P05538 268 aa16.56■□□□□ 0.24
VPS29-204ENST00000548259 IL4RP24394 825 aa16.56■□□□□ 0.24
VPS29-204ENST00000548259 NIPAL4Q0D2K0 466 aa16.56■□□□□ 0.24
VPS29-204ENST00000548259 PAFAH1B3Q15102 231 aaKnown RBP16.56■□□□□ 0.24
VPS29-204ENST00000548259 NR6A1Q15406 480 aa16.56■□□□□ 0.24
VPS29-204ENST00000548259 CCDC183Q5T5S1 534 aa16.56■□□□□ 0.24
VPS29-204ENST00000548259 OOSP2Q86WS3 158 aa16.56■□□□□ 0.24
VPS29-204ENST00000548259 MAP7D3Q8IWC1 876 aa16.56■□□□□ 0.24
VPS29-204ENST00000548259 D2HGDHQ8N465 521 aa16.56■□□□□ 0.24
VPS29-204ENST00000548259 NIPA2Q8N8Q9 360 aa16.56■□□□□ 0.24
VPS29-204ENST00000548259 Q8NA96 180 aa16.56■□□□□ 0.24
VPS29-204ENST00000548259 GPR26Q8NDV2 337 aa16.56■□□□□ 0.24
VPS29-204ENST00000548259 BRSK1Q8TDC3 778 aa16.56■□□□□ 0.24
VPS29-204ENST00000548259 SGSM3Q96HU1 749 aa16.56■□□□□ 0.24
VPS29-204ENST00000548259 MAP3K3Q99759 626 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms