RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 KCTD11Q693B1 232 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 DENND5AQ6IQ26 1287 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 TMEM220Q6QAJ8 160 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CRTC3Q6UUV7 619 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ZNF574Q6ZN55 896 aaPredicted RBP9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ZNF547Q8IVP9 402 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 AVL9Q8NBF6 648 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ZNF248Q8NDW4 579 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 AHCYL2Q96HN2 611 aaKnown RBP9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 ALS2CR12Q96Q35 445 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 C19orf43Q9BQ61 176 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 TIMM29Q9BSF4 260 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SEMA6CQ9H3T2 930 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 STN1Q9H668 368 aaKnown RBP9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 SARS2Q9NP81 518 aaKnown RBP9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 PRDM8Q9NQV8 689 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 AKAP7Q9P0M2 348 aaPredicted RBP9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 CPNE7Q9UBL6 633 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 KCTD3Q9Y597 815 aa9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 DNMT3AQ9Y6K1 912 aaPredicted RBP9.59□□□□□ -0.87
TNFRSF1A-214ENST00000543048 A6NCN8 305 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 CDRT15L2A8MXV6 281 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 ESPNB1AK53 854 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 GAPDHSO14556 408 aaPredicted RBP9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 LIASO43766 372 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 POP7O75817 140 aaKnown RBP9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 ITGA2BP08514 1039 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 VCLP18206 1134 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 MSH3P20585 1137 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 IDSP22304 550 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 ITPKBP27987 946 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 HADHAP40939 763 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 ABCG1P45844 678 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 LIMK2P53671 638 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 GDF10P55107 478 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 HHEXQ03014 270 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 TRA2AQ13595 282 aaKnown RBP eCLIP9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 MAP9Q49MG5 647 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 PHF19Q5T6S3 580 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 TMEM71Q6P5X7 295 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 ABRAXAS1Q6UWZ7 409 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 WASH2PQ6VEQ5 465 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 TMPRSS9Q7Z410 1059 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 TRAPPC5Q8IUR0 188 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 SLITRK4Q8IW52 837 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 RASGEF1AQ8N9B8 481 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 DDHD1Q8NEL9 900 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 OR4D9Q8NGE8 314 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 OR10G6Q8NH81 332 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 C1orf54Q8WWF1 131 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 RTP4Q96DX8 246 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 CCDC97Q96F63 343 aaPredicted RBP9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 ZNF514Q96K75 400 aaPredicted RBP9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 CMKLR1Q99788 373 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 NUDT22Q9BRQ3 303 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 DPH1Q9BZG8 443 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 ZCCHC2Q9C0B9 1178 aaKnown RBP9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 OSGEPL1Q9H4B0 414 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 ASB8Q9H765 288 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 LRRC40Q9H9A6 602 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 RDH14Q9HBH5 336 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 WASH6PQ9NQA3 447 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 ZNF148Q9UQR1 794 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 DRG1Q9Y295 367 aaKnown RBP9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 DNAJC16Q9Y2G8 782 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 PPP2R2CQ9Y2T4 447 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 LOXL2Q9Y4K0 774 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 IGSF10Q6WRI0 2623 aa9.58□□□□□ -0.88
TNFRSF1A-214ENST00000543048 IGHV5-10-1A0A0J9YXX1 117 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 PMS2P1A4D2B8 440 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 PRR19A6NJB7 356 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 ERI2A8K979 691 aaKnown RBP9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 LDB2O43679 373 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 SRP72O76094 671 aaKnown RBP9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 PRAMEF1O95521 474 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 AP2A1O95782 977 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 VIPP01282 170 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 JMJD7P0C870 316 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 HGFP14210 728 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 TPH1P17752 444 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 CA5AP35218 305 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 FDFT1P37268 417 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 SLC19A1P41440 591 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 PPM1FP49593 454 aaPredicted RBP9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 EPHA4P54764 986 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 TMPRSS15P98073 1019 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 XIAPP98170 497 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 CFHR1Q03591 330 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 NFATC2Q13469 925 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 SNX1Q13596 522 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 OASLQ15646 514 aaKnown RBP9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 CCNG2Q16589 344 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 PLA2G4EQ3MJ16 856 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 GPRC6AQ5T6X5 926 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 AGAP9Q5VTM2 703 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 WDR74Q6RFH5 385 aaPredicted RBP9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 C11orf96Q7Z7L8 435 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 CLEC14AQ86T13 490 aa9.57□□□□□ -0.88
TNFRSF1A-214ENST00000543048 LINC00523Q86TU6 105 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms