RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 TAS1R2Q8TE23 839 aa4.02□□□□□ -1.77
CTHRC1-204ENST00000520880 ELP4Q96EB1 424 aa4.02□□□□□ -1.77
CTHRC1-204ENST00000520880 ZNF583Q96ND8 569 aa4.02□□□□□ -1.77
CTHRC1-204ENST00000520880 BBS4Q96RK4 519 aa4.02□□□□□ -1.77
CTHRC1-204ENST00000520880 PUS3Q9BZE2 481 aaKnown RBP4.02□□□□□ -1.77
CTHRC1-204ENST00000520880 BOLA2Q9H3K6 86 aa4.02□□□□□ -1.77
CTHRC1-204ENST00000520880 MAGEE1Q9HCI5 957 aa4.02□□□□□ -1.77
CTHRC1-204ENST00000520880 GPR108Q9NPR9 543 aa4.02□□□□□ -1.77
CTHRC1-204ENST00000520880 ITM2CQ9NQX7 267 aa4.02□□□□□ -1.77
CTHRC1-204ENST00000520880 DIAPH3Q9NSV4 1193 aa4.02□□□□□ -1.77
CTHRC1-204ENST00000520880 AMDHD2Q9Y303 409 aa4.02□□□□□ -1.77
CTHRC1-204ENST00000520880 LSM4Q9Y4Z0 139 aaKnown RBP4.02□□□□□ -1.77
CTHRC1-204ENST00000520880 TNRC6CQ9HCJ0 1690 aaKnown RBP4.02□□□□□ -1.77
CTHRC1-204ENST00000520880 ATRNO75882 1429 aa4.02□□□□□ -1.77
CTHRC1-204ENST00000520880 ECM29Q5VYK3 1845 aa4.02□□□□□ -1.77
CTHRC1-204ENST00000520880 RPAP1Q9BWH6 1393 aaPredicted RBP4.02□□□□□ -1.77
CTHRC1-204ENST00000520880 KIAA1551Q9HCM1 1747 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 CCDC171Q6TFL3 1326 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 A0A1B0GUL7 405 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 TMEM202A6NGA9 273 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 IRAK2O43187 625 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 TSPAN3O60637 253 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 HEXAP06865 529 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 PRSS1P07477 247 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 MAOAP21397 527 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 POU1F1P28069 291 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 SHMT1P34896 483 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 DEKP35659 375 aaKnown RBP4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 GRK6P43250 576 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 CUL4AQ13619 759 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 EFR3AQ14156 821 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 CCDC57Q2TAC2 916 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 WDR45BQ5MNZ6 344 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 ZNF852Q6ZMS4 543 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 LINGO2Q7L985 606 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 RNF113BQ8IZP6 322 aaKnown RBP4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 TBC1D20Q96BZ9 403 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 F2RL3Q96RI0 385 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 LITAFQ99732 161 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 FSD1Q9BTV5 496 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 HEMGNQ9BXL5 484 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 UPF3BQ9BZI7 483 aaKnown RBP4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 TTYH1Q9H313 450 aaPredicted RBP4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 MAST2Q6P0Q8 1798 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 ABCC12Q96J65 1359 aa4.01□□□□□ -1.77
CTHRC1-204ENST00000520880 SH3TC1Q8TE82 1336 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 LAMB1P07942 1786 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 PMS2P5A8MQ11 134 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 TEX22C9J3V5 150 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 IFNL4K9M1U5 179 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 MT-CYBP00156 380 aaPredicted RBP4□□□□□ -1.77
CTHRC1-204ENST00000520880 URODP06132 367 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 HSP90AA1P07900 732 aaKnown RBP4□□□□□ -1.77
CTHRC1-204ENST00000520880 ADORA1P30542 326 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 CORO1AP31146 461 aaKnown RBP4□□□□□ -1.77
CTHRC1-204ENST00000520880 GNL1P36915 607 aaPredicted RBP4□□□□□ -1.77
CTHRC1-204ENST00000520880 TRAPPC10P48553 1259 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 TIMM10P62072 90 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 EFNB1P98172 346 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 TDGQ13569 410 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 SLC12A1Q13621 1099 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 NECTIN1Q15223 517 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 TCTN1Q2MV58 587 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 GPATCH4Q5T3I0 446 aaKnown RBP4□□□□□ -1.77
CTHRC1-204ENST00000520880 SUSD4Q5VX71 490 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 ARHGAP17Q68EM7 881 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 HIST2H2BDQ6DRA6 164 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 TRNP1Q6NT89 227 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 ARHGAP11AQ6P4F7 1023 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 CLEC17AQ6ZS10 378 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 KCTD8Q6ZWB6 473 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 ZNF589Q86UQ0 364 aaPredicted RBP4□□□□□ -1.77
CTHRC1-204ENST00000520880 MYPOPQ86VE0 399 aaPredicted RBP4□□□□□ -1.77
CTHRC1-204ENST00000520880 TMTC1Q8IUR5 882 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 ZCCHC9Q8N567 271 aaKnown RBP4□□□□□ -1.77
CTHRC1-204ENST00000520880 ZBTB2Q8N680 514 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 LRRC1Q9BTT6 524 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 MMP25Q9NPA2 562 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 HCFC1R1Q9NWW0 138 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 TRMT112Q9UI30 125 aaKnown RBP4□□□□□ -1.77
CTHRC1-204ENST00000520880 FBXO9Q9UK97 447 aaPredicted RBP4□□□□□ -1.77
CTHRC1-204ENST00000520880 OR2W1Q9Y3N9 320 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 TIAM2Q8IVF5 1701 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 CCDC88AQ3V6T2 1871 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 RTL9Q8NET4 1388 aa4□□□□□ -1.77
CTHRC1-204ENST00000520880 AFF2P51816 1311 aa3.99□□□□□ -1.77
CTHRC1-204ENST00000520880 CACNA1SQ13698 1873 aa3.99□□□□□ -1.77
CTHRC1-204ENST00000520880 TNS1Q9HBL0 1735 aaKnown RBP3.99□□□□□ -1.77
CTHRC1-204ENST00000520880 A0A1B0GVY2 172 aa3.99□□□□□ -1.77
CTHRC1-204ENST00000520880 ANKRD18BA2A2Z9 1011 aa3.99□□□□□ -1.77
CTHRC1-204ENST00000520880 GOLGA6L9A6NEM1 432 aa3.99□□□□□ -1.77
CTHRC1-204ENST00000520880 DVL1O14640 695 aa3.99□□□□□ -1.77
CTHRC1-204ENST00000520880 TACC1O75410 805 aa3.99□□□□□ -1.77
CTHRC1-204ENST00000520880 GALTP07902 379 aa3.99□□□□□ -1.77
CTHRC1-204ENST00000520880 IFIT1P09914 478 aaKnown RBP3.99□□□□□ -1.77
CTHRC1-204ENST00000520880 CASTP20810 708 aaKnown RBP3.99□□□□□ -1.77
CTHRC1-204ENST00000520880 ALDH4A1P30038 563 aa3.99□□□□□ -1.77
CTHRC1-204ENST00000520880 METAP2P50579 478 aaKnown RBP eCLIP3.99□□□□□ -1.77
CTHRC1-204ENST00000520880 RAD23BP54727 409 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms