RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 RNASE12Q5GAN4 147 aaKnown RBP4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 HECTD3Q5T447 861 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 GARNL3Q5VVW2 1013 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 ARMC3Q5W041 872 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 NCAPH2Q6IBW4 605 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 TATDN1Q6P1N9 297 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 PCSK4Q6UW60 755 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 TRIM72Q6ZMU5 477 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 RHOUQ7L0Q8 258 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 GET4Q7L5D6 327 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 CHST3Q7LGC8 479 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 IGFN1Q86VF2 1251 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 POC5Q8NA72 575 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 COLGALT1Q8NBJ5 622 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 OR52N4Q8NGI2 321 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 IL17DQ8TAD2 202 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 TMEM170AQ8WVE7 144 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 PRPF31Q8WWY3 499 aaKnown RBP4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 MRPS27Q92552 414 aaKnown RBP4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 GTF3C6Q969F1 213 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 ATP6V1E2Q96A05 226 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 OTULINQ96BN8 352 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 SAT2Q96F10 170 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 ADAD1Q96M93 576 aaKnown RBP4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 OR10A4Q9H209 315 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 VCPKMTQ9H867 229 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 TAB2Q9NYJ8 693 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 GRHL1Q9NZI5 618 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 EPS15L1Q9UBC2 864 aa4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 IPO11Q9UI26 975 aaKnown RBP4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 ISY1Q9ULR0 285 aaKnown RBP4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 MUC22E2RYF6 1773 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 RP1L1Q8IWN7 2480 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P23-201ENST00000518743 MED13LQ71F56 2210 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 GLOD5A6NK44 160 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 K7ESM1 405 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 CLGNO14967 610 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 SLC25A12O75746 678 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 PGM3O95394 542 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 CBX6O95503 412 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 ADAP00813 363 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 QDPRP09417 244 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 PRR35P0CG20 571 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 ZNF286BP0CG31 522 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 GHRP10912 638 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 SLC2A4P14672 509 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 FPR3P25089 353 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 YWHAQP27348 245 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 CDAP32320 146 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 PBX3P40426 434 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 EIF2S3P41091 472 aaKnown RBP4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 MSH2P43246 934 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 ALDH7A1P49419 539 aaKnown RBP4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 GNAQP50148 359 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 CYP2J2P51589 502 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 SLC25A3Q00325 362 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 GAB1Q13480 694 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 SHBQ15464 509 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 RPE65Q16518 533 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 ZNF667Q5HYK9 610 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 NAPEPLDQ6IQ20 393 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 KRT80Q6KB66 452 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 RPUSD3Q6P087 351 aaKnown RBP4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 DHRS13Q6UX07 377 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 SERPINA13PQ6UXR4 307 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 RANBP10Q6VN20 620 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 MDGA2Q7Z553 956 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 PEG10Q86TG7 708 aaKnown RBP4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 DNAAF5Q86Y56 855 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 C1QL4Q86Z23 238 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 SRRM1Q8IYB3 904 aaKnown RBP4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 SYT2Q8N9I0 419 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 ACTRT2Q8TDY3 377 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 WIPF2Q8TF74 440 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 ZFPM2Q8WW38 1151 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 DVL3Q92997 716 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 ATP6V0A1Q93050 837 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 PLEKHG4BQ96PX9 1271 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 ADPGKQ9BRR6 497 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 CYP4F11Q9HBI6 524 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 CCDC177Q9NQR7 707 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 SNTG1Q9NSN8 517 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 ATP8A2Q9NTI2 1148 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 HSPB7Q9UBY9 170 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 SEC63Q9UGP8 760 aaKnown RBP4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 INTS6Q9UL03 887 aaKnown RBP4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 REXO2Q9Y3B8 237 aaKnown RBP4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 PTPRBP23467 1997 aa4.81□□□□□ -1.64
HMGB1P23-201ENST00000518743 LOXHD1Q8IVV2 1947 aa4.8□□□□□ -1.64
HMGB1P23-201ENST00000518743 ADAMTS9Q9P2N4 1935 aa4.8□□□□□ -1.64
HMGB1P23-201ENST00000518743 CLUHO75153 1309 aa4.8□□□□□ -1.64
HMGB1P23-201ENST00000518743 EXOC3O60645 756 aa4.8□□□□□ -1.64
HMGB1P23-201ENST00000518743 RNF8O76064 485 aa4.8□□□□□ -1.64
HMGB1P23-201ENST00000518743 JTBO76095 146 aa4.8□□□□□ -1.64
HMGB1P23-201ENST00000518743 ESRRBO95718 433 aa4.8□□□□□ -1.64
HMGB1P23-201ENST00000518743 HEXAP06865 529 aa4.8□□□□□ -1.64
HMGB1P23-201ENST00000518743 CHRM5P08912 532 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P23-201ENST00000518743 FCGR2AP12318 317 aa4.8□□□□□ -1.64
HMGB1P23-201ENST00000518743 ZFP36P26651 326 aaKnown RBP4.8□□□□□ -1.64
HMGB1P23-201ENST00000518743 TACR3P29371 465 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms