RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 HDAC10Q969S8 669 aa11.48□□□□□ -0.57
UBA3-211ENST00000493957 SGF29Q96ES7 293 aa11.48□□□□□ -0.57
UBA3-211ENST00000493957 CCDC3Q9BQI4 270 aa11.48□□□□□ -0.57
UBA3-211ENST00000493957 OSGEPL1Q9H4B0 414 aa11.48□□□□□ -0.57
UBA3-211ENST00000493957 PRDM8Q9NQV8 689 aa11.48□□□□□ -0.57
UBA3-211ENST00000493957 SCHIP1Q9P0W5 487 aaPredicted RBP11.48□□□□□ -0.57
UBA3-211ENST00000493957 SLC30A1Q9Y6M5 507 aa11.48□□□□□ -0.57
UBA3-211ENST00000493957 ANKRD12Q6UB98 2062 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 ADAMTS20P59510 1910 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 KMOO15229 486 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 TTI1O43156 1089 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 BANF1O75531 89 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 GAS8O95995 478 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 MSH3P20585 1137 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 ACRV1P26436 265 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 IVDP26440 423 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 PAFAH1B1P43034 410 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 DUSP3P51452 185 aaPredicted RBP11.47□□□□□ -0.57
UBA3-211ENST00000493957 SHC2P98077 582 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 CDK16Q00536 496 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 ACVR1Q04771 509 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 GTF2H3Q13889 308 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 LRP8Q14114 963 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 SEPT7Q16181 437 aaKnown RBP11.47□□□□□ -0.57
UBA3-211ENST00000493957 SKIDA1Q1XH10 827 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 PCID2Q5JVF3 399 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 FNBP1LQ5T0N5 605 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 RNASEH2BQ5TBB1 312 aaKnown RBP11.47□□□□□ -0.57
UBA3-211ENST00000493957 TAS2R42Q7RTR8 314 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 TMPRSS7Q7RTY8 843 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 LDB1Q86U70 411 aaPredicted RBP11.47□□□□□ -0.57
UBA3-211ENST00000493957 ZNF761Q86XN6 746 aaPredicted RBP11.47□□□□□ -0.57
UBA3-211ENST00000493957 JAMLQ86YT9 394 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 ARL14Q8N4G2 192 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 LILRA3Q8N6C8 439 aaPredicted RBP11.47□□□□□ -0.57
UBA3-211ENST00000493957 Q8N9G6 341 aaPredicted RBP11.47□□□□□ -0.57
UBA3-211ENST00000493957 MAPK15Q8TD08 544 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 SLC37A2Q8TED4 501 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 GLMNQ92990 594 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 SERPINB12Q96P63 405 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 KRT12Q99456 494 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 C19orf43Q9BQ61 176 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 TREX1Q9NSU2 369 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 MARCH4Q9P2E8 410 aaPredicted RBP11.47□□□□□ -0.57
UBA3-211ENST00000493957 FAM8A1Q9UBU6 413 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 ASIC3Q9UHC3 531 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 ANGPTL2Q9UKU9 493 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 PRSS21Q9Y6M0 314 aa11.47□□□□□ -0.57
UBA3-211ENST00000493957 IGLV3-16A0A075B6K0 115 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 PRAMEF33A0A0G2JMD5 474 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 GPR89AB7ZAQ6 455 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 DNALI1O14645 258 aaPredicted RBP11.46□□□□□ -0.57
UBA3-211ENST00000493957 PPM1DO15297 605 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 POP7O75817 140 aaKnown RBP11.46□□□□□ -0.57
UBA3-211ENST00000493957 TRIM16O95361 564 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 GP1BAP07359 652 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 F7P08709 466 aaPredicted RBP11.46□□□□□ -0.57
UBA3-211ENST00000493957 GPR89BP0CG08 455 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 BRAFP15056 766 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 ARNTP27540 789 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 RPL10P27635 214 aaKnown RBP11.46□□□□□ -0.57
UBA3-211ENST00000493957 MAGEA3P43357 314 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 NPY2RP49146 381 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 RPIAP49247 311 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 DRG2P55039 364 aaKnown RBP11.46□□□□□ -0.57
UBA3-211ENST00000493957 CCL7P80098 99 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 DR1Q01658 176 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 CACNG1Q06432 222 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 ILKQ13418 452 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 NFE2L1Q14494 772 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 CDCP2Q5VXM1 449 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 IZUMO3Q5VZ72 239 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 PPIL6Q8IXY8 311 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 CLDN19Q8N6F1 224 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 MCUQ8NE86 351 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 NAT6Q93015 286 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 ULK4Q96C45 1275 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 MFSD3Q96ES6 412 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 PWWP2AQ96N64 755 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 TTC25Q96NG3 672 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 COPS8Q99627 209 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 TIMM29Q9BSF4 260 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 ZCCHC2Q9C0B9 1178 aaKnown RBP11.46□□□□□ -0.57
UBA3-211ENST00000493957 IL22Q9GZX6 179 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 SYNDIG1Q9H7V2 258 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 ZDHHC3Q9NYG2 299 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 IL1RAPL1Q9NZN1 696 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 NCKIPSDQ9NZQ3 722 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 BFARQ9NZS9 450 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 LRIT1Q9P2V4 623 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 RIMKLBQ9ULI2 386 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 ATXN7L1Q9ULK2 861 aaPredicted RBP11.46□□□□□ -0.57
UBA3-211ENST00000493957 WDR37Q9Y2I8 494 aa11.46□□□□□ -0.57
UBA3-211ENST00000493957 APC2O95996 2303 aa11.46□□□□□ -0.58
UBA3-211ENST00000493957 ACACAQ13085 2346 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 A0A1W2PQM1 296 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 GOLGA8KD6RF30 607 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 GOLGA8TH3BQL2 631 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 CCDC188H7C350 402 aa11.45□□□□□ -0.58
UBA3-211ENST00000493957 B4GAT1O43505 415 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms