RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 PHF10Q8WUB8 498 aaKnown RBP13.63□□□□□ -0.23
NPHP4-207ENST00000470763 ELMO1Q92556 727 aa13.63□□□□□ -0.23
NPHP4-207ENST00000470763 FIG4Q92562 907 aa13.63□□□□□ -0.23
NPHP4-207ENST00000470763 PABPC5Q96DU9 382 aaKnown RBP13.63□□□□□ -0.23
NPHP4-207ENST00000470763 L3HYPDHQ96EM0 354 aa13.63□□□□□ -0.23
NPHP4-207ENST00000470763 ZNF300Q96RE9 604 aaPredicted RBP13.63□□□□□ -0.23
NPHP4-207ENST00000470763 FSD1LQ9BXM9 530 aa13.63□□□□□ -0.23
NPHP4-207ENST00000470763 PLEKHA5Q9HAU0 1116 aa13.63□□□□□ -0.23
NPHP4-207ENST00000470763 SEMA4BQ9NPR2 832 aaPredicted RBP13.63□□□□□ -0.23
NPHP4-207ENST00000470763 NECTIN3Q9NQS3 549 aa13.63□□□□□ -0.23
NPHP4-207ENST00000470763 AKT3Q9Y243 479 aa13.63□□□□□ -0.23
NPHP4-207ENST00000470763 CRYL1Q9Y2S2 319 aa13.63□□□□□ -0.23
NPHP4-207ENST00000470763 CAB39Q9Y376 341 aaPredicted RBP13.63□□□□□ -0.23
NPHP4-207ENST00000470763 FAM92AA1XBS5 289 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 HOXC11O43248 304 aaPredicted RBP13.62□□□□□ -0.23
NPHP4-207ENST00000470763 GOT2P00505 430 aaKnown RBP13.62□□□□□ -0.23
NPHP4-207ENST00000470763 NAT1P18440 290 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 PAMP19021 973 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 HTR1EP28566 365 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 SCNN1AP37088 669 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 ZFP36L2P47974 494 aaKnown RBP13.62□□□□□ -0.23
NPHP4-207ENST00000470763 NKG7Q16617 165 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 FKBP1CQ5VVH2 108 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 PROSER1Q86XN7 944 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 TP53INP1Q96A56 240 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 GAD1Q99259 594 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 OSBPL10Q9BXB5 764 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 C6orf62Q9GZU0 229 aaPredicted RBP13.62□□□□□ -0.23
NPHP4-207ENST00000470763 TREX1Q9NSU2 369 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 A0A0G2JMZ2 1700 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 LRRC37A2A6NM11 1700 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 PHIPQ8WWQ0 1821 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 MGEA5O60502 916 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 CRCPO75575 148 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 ANGPTL1O95841 491 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 FTH1P02794 183 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 CYBBP04839 570 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 IL1RL1Q01638 556 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 CELF2-AS1Q8N7Q2 184 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 HSFY1Q96LI6 401 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 CDK5RAP1Q96SZ6 601 aaKnown RBP13.62□□□□□ -0.23
NPHP4-207ENST00000470763 GPR20Q99678 358 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 LRRC3Q9BY71 257 aa13.62□□□□□ -0.23
NPHP4-207ENST00000470763 MRM3Q9HC36 420 aaKnown RBP13.62□□□□□ -0.23
NPHP4-207ENST00000470763 PRSS23O95084 383 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 STAU1O95793 577 aaKnown RBP13.61□□□□□ -0.23
NPHP4-207ENST00000470763 CYP4B1P13584 511 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 IL12AP29459 219 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 CXCR3P49682 368 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 SEMA3BQ13214 749 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 RAPSNQ13702 412 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 TRIP4Q15650 581 aaPredicted RBP13.61□□□□□ -0.23
NPHP4-207ENST00000470763 NBPF12Q5TAG4 269 aaPredicted RBP13.61□□□□□ -0.23
NPHP4-207ENST00000470763 KANK2Q63ZY3 851 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 GALNT5Q7Z7M9 940 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 GATAD2AQ86YP4 633 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 TMEM199Q8N511 208 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 COPS5Q92905 334 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 NT5C3BQ969T7 300 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 VAT1Q99536 393 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 WDR6Q9NNW5 1121 aaKnown RBP13.61□□□□□ -0.23
NPHP4-207ENST00000470763 DDX28Q9NUL7 540 aaKnown RBP13.61□□□□□ -0.23
NPHP4-207ENST00000470763 DDIT4Q9NX09 232 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 LEF1Q9UJU2 399 aaPredicted RBP13.61□□□□□ -0.23
NPHP4-207ENST00000470763 AAR2Q9Y312 384 aaKnown RBP13.61□□□□□ -0.23
NPHP4-207ENST00000470763 BOLA1Q9Y3E2 137 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 UGT2A1Q9Y4X1 527 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 CENPFP49454 3210 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 OR51F1A6NGY5 319 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 PRMT5O14744 637 aaPredicted RBP13.61□□□□□ -0.23
NPHP4-207ENST00000470763 EEDO75530 441 aaKnown RBP13.61□□□□□ -0.23
NPHP4-207ENST00000470763 USP2O75604 605 aaPredicted RBP13.61□□□□□ -0.23
NPHP4-207ENST00000470763 KRT8P05787 483 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 CD6P30203 668 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 POLR2JP52435 117 aaKnown RBP13.61□□□□□ -0.23
NPHP4-207ENST00000470763 PPP2R2BQ00005 443 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 NPTX1Q15818 432 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 VARS2Q5ST30 1063 aaKnown RBP13.61□□□□□ -0.23
NPHP4-207ENST00000470763 TMEM179BQ7Z7N9 219 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 SYTL1Q8IYJ3 562 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 DCBLD1Q8N8Z6 715 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 OR7G1Q8NGA0 311 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 LGALS12Q96DT0 336 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 POLR3BQ9NW08 1133 aaPredicted RBP13.61□□□□□ -0.23
NPHP4-207ENST00000470763 MAGEL2Q9UJ55 1249 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 NAALAD2Q9Y3Q0 740 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 PCDHGA10Q9Y5H3 936 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 SSX4O60224 188 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 SLC22A3O75751 556 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 MASP1P48740 699 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 CDK5R2Q13319 367 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 CLCA4Q14CN2 919 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 CCDC58Q4VC31 144 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 COQ5Q5HYK3 327 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 OR6P1Q8NGX9 317 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 YIPF6Q96EC8 236 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 ZHX1-C8orf76Q96EF9 292 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 TEPSINQ96N21 525 aa13.61□□□□□ -0.23
NPHP4-207ENST00000470763 ZBTB20Q9HC78 741 aaPredicted RBP13.61□□□□□ -0.23
NPHP4-207ENST00000470763 SNTG2Q9NY99 539 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms