RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	CCDC137	Q6PK04	289 aa	Known RBP	12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	RASGEF1C	Q8N431	466 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507		Q8N9G6	341 aa	Predicted RBP	12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	OR13C4	Q8NGS5	318 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	BRSK1	Q8TDC3	778 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	GLYATL1	Q969I3	302 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	ZMYND15	Q9H091	742 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	OSGEPL1	Q9H4B0	414 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	IL17C	Q9P0M4	197 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	VPS18	Q9P253	973 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	FEZ2	Q9UHY8	353 aa	Predicted RBP	12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	CRLS1	Q9UJA2	301 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	DRG1	Q9Y295	367 aa	Known RBP	12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	ATM	Q13315	3056 aa		12.55	□□□□□ -0.4
FDPS-204	ENST00000461507	SDK2	Q58EX2	2172 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	ERI2	A8K979	691 aa	Known RBP	12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	HGS	O14964	777 aa	Predicted RBP	12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	UGT1A9	O60656	530 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	SNX2	O60749	519 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	PHF2	O75151	1096 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	ECEL1	O95672	775 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	KRT14	P02533	472 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	JMJD7	P0C870	316 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	LIPC	P11150	499 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	ACP5	P13686	325 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	UGT1A6	P19224	532 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	UGT1A1	P22309	533 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	UGT1A4	P22310	534 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	CASQ1	P31415	396 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	UGT1A3	P35503	534 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	PAFAH1B1	P43034	410 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	FASLG	P48023	281 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	SESN2	P58004	480 aa	Predicted RBP	12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	GPS1	Q13098	491 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	SEMA5A	Q13591	1074 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	C16orf72	Q14CZ0	275 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	PPP1R7	Q15435	360 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	INSC	Q1MX18	579 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	CCDC38	Q502W7	563 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	PYCR3	Q53H96	274 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	ZRANB3	Q5FWF4	1079 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	KCTD11	Q693B1	232 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	PDPK2P	Q6A1A2	396 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	DRICH1	Q6PGQ1	229 aa	Predicted RBP	12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	C4orf22	Q6V702	233 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	TRAPPC5	Q8IUR0	188 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	ZNF843	Q8N446	348 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	GRK7	Q8WTQ7	553 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	TRIM44	Q96DX7	344 aa	Predicted RBP	12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	DNAJC1	Q96KC8	554 aa	Known RBP	12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	ZCCHC2	Q9C0B9	1178 aa	Known RBP	12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	ASB8	Q9H765	288 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	UGT1A7	Q9HAW7	530 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	UGT1A10	Q9HAW8	530 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	UGT1A8	Q9HAW9	530 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	IL26	Q9NPH9	171 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	ATXN10	Q9UBB4	475 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	PISD	Q9UG56	409 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	KCNK6	Q9Y257	313 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	PLEKHM1	Q9Y4G2	1056 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	SAR1B	Q9Y6B6	198 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	SLC30A1	Q9Y6M5	507 aa		12.54	□□□□□ -0.4
FDPS-204	ENST00000461507	GRID2	O43424	1007 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	DNAJC6	O75061	913 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	PPFIA2	O75334	1257 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	CDK14	O94921	469 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	ZNF8	P17098	575 aa	Predicted RBP	12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	MSH3	P20585	1137 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	ITGAL	P20701	1170 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	CD82	P27701	267 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	CD1C	P29017	333 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	PBLD	P30039	288 aa	Predicted RBP	12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	MC4R	P32245	332 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	COIL	P38432	576 aa	Predicted RBP	12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	HADHA	P40939	763 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	ETV5	P41161	510 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	CFHR1	Q03591	330 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	TRA2A	Q13595	282 aa	Known RBP eCLIP	12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	MAP9	Q49MG5	647 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	DENND5A	Q6IQ26	1287 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	TTC27	Q6P3X3	843 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	ZNF574	Q6ZN55	896 aa	Predicted RBP	12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	DET1	Q7L5Y6	550 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	TAS2R42	Q7RTR8	314 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	DTX1	Q86Y01	620 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	KLHL7	Q8IXQ5	586 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	PPHLN1	Q8NEY8	458 aa	Known RBP	12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	ACTRT1	Q8TDG2	376 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	PATE1	Q8WXA2	126 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	CCNL2	Q96S94	520 aa	Predicted RBP	12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	CMKLR1	Q99788	373 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	DPYSL5	Q9BPU6	564 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	NUDT22	Q9BRQ3	303 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	SEMA6C	Q9H3T2	930 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	FAM96A	Q9H5X1	160 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	FAM8A1	Q9UBU6	413 aa		12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	CNOT6	Q9ULM6	557 aa	Known RBP	12.53	□□□□□ -0.4
FDPS-204	ENST00000461507	DNAJC16	Q9Y2G8	782 aa		12.53	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms