RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 TIMM29Q9BSF4 260 aa17.68■□□□□ 0.42
CHCHD3-203ENST00000448878 NUP85Q9BW27 656 aa17.68■□□□□ 0.42
CHCHD3-203ENST00000448878 RAD18Q9NS91 495 aa17.68■□□□□ 0.42
CHCHD3-203ENST00000448878 FGF21Q9NSA1 209 aa17.68■□□□□ 0.42
CHCHD3-203ENST00000448878 EPHA6Q9UF33 1036 aa17.68■□□□□ 0.42
CHCHD3-203ENST00000448878 UBA6A0AVT1 1052 aaPredicted RBP17.67■□□□□ 0.42
CHCHD3-203ENST00000448878 ZNF185O15231 689 aa17.67■□□□□ 0.42
CHCHD3-203ENST00000448878 VEGFDO43915 354 aa17.67■□□□□ 0.42
CHCHD3-203ENST00000448878 DPM1O60762 260 aa17.67■□□□□ 0.42
CHCHD3-203ENST00000448878 PTGIRP43119 386 aa17.67■□□□□ 0.42
CHCHD3-203ENST00000448878 IL10RAQ13651 578 aa17.67■□□□□ 0.42
CHCHD3-203ENST00000448878 GTF2H3Q13889 308 aa17.67■□□□□ 0.42
CHCHD3-203ENST00000448878 PCSK7Q16549 785 aa17.67■□□□□ 0.42
CHCHD3-203ENST00000448878 ATP13A4Q4VNC1 1196 aa17.67■□□□□ 0.42
CHCHD3-203ENST00000448878 FAM182AQ5T1J6 154 aa17.67■□□□□ 0.42
CHCHD3-203ENST00000448878 JMJD6Q6NYC1 403 aaPredicted RBP17.67■□□□□ 0.42
CHCHD3-203ENST00000448878 KLHL35Q6PF15 583 aa17.67■□□□□ 0.42
CHCHD3-203ENST00000448878 FCRL4Q96PJ5 515 aa17.67■□□□□ 0.42
CHCHD3-203ENST00000448878 TSGA13Q96PP4 275 aa17.67■□□□□ 0.42
CHCHD3-203ENST00000448878 MAP3K3Q99759 626 aa17.67■□□□□ 0.42
CHCHD3-203ENST00000448878 ISCUQ9H1K1 167 aa17.67■□□□□ 0.42
CHCHD3-203ENST00000448878 WASH6PQ9NQA3 447 aa17.67■□□□□ 0.42
CHCHD3-203ENST00000448878 AIPL1Q9NZN9 384 aa17.67■□□□□ 0.42
CHCHD3-203ENST00000448878 SPTAN1Q13813 2472 aaKnown RBP17.67■□□□□ 0.42
CHCHD3-203ENST00000448878 KCNK1O00180 336 aa17.66■□□□□ 0.42
CHCHD3-203ENST00000448878 SCRG1O75711 98 aa17.66■□□□□ 0.42
CHCHD3-203ENST00000448878 SORBS2O94875 1100 aaKnown RBP17.66■□□□□ 0.42
CHCHD3-203ENST00000448878 KLK3P07288 261 aaPredicted RBP17.66■□□□□ 0.42
CHCHD3-203ENST00000448878 DPYSL3Q14195 570 aa17.66■□□□□ 0.42
CHCHD3-203ENST00000448878 CERS6Q6ZMG9 384 aa17.66■□□□□ 0.42
CHCHD3-203ENST00000448878 APTXQ7Z2E3 356 aaKnown RBP17.66■□□□□ 0.42
CHCHD3-203ENST00000448878 MAMDC2Q7Z304 686 aaPredicted RBP17.66■□□□□ 0.42
CHCHD3-203ENST00000448878 BPHLQ86WA6 291 aaPredicted RBP17.66■□□□□ 0.42
CHCHD3-203ENST00000448878 ZNF514Q96K75 400 aaPredicted RBP17.66■□□□□ 0.42
CHCHD3-203ENST00000448878 RAB33BQ9H082 229 aa17.66■□□□□ 0.42
CHCHD3-203ENST00000448878 THAP2Q9H0W7 228 aa17.66■□□□□ 0.42
CHCHD3-203ENST00000448878 PSMD13Q9UNM6 376 aa17.66■□□□□ 0.42
CHCHD3-203ENST00000448878 WDR37Q9Y2I8 494 aa17.66■□□□□ 0.42
CHCHD3-203ENST00000448878 SPENQ96T58 3664 aaKnown RBP17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 MYO1FO00160 1098 aa17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 CPNE3O75131 537 aaKnown RBP17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 MMP2P08253 660 aa17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 MX2P20592 715 aa17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 FECHP22830 423 aa17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 PRKCIP41743 596 aa17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 TMEM115Q12893 351 aaPredicted RBP17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 STX1AQ16623 288 aa17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 DNTTIP2Q5QJE6 756 aaKnown RBP17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 CCDC183Q5T5S1 534 aa17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 AGAP9Q5VTM2 703 aa17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 E4F1Q66K89 784 aaPredicted RBP17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 PDPK2PQ6A1A2 396 aa17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 CCDC70Q6NSX1 233 aa17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 WASH2PQ6VEQ5 465 aa17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 TMC3Q7Z5M5 1100 aa17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 ZNF547Q8IVP9 402 aa17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 NIPA2Q8N8Q9 360 aa17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 SLC41A2Q96JW4 573 aa17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 ZNF830Q96NB3 372 aaPredicted RBP17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 BPIFA1Q9NP55 256 aa17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 MLXIPLQ9NP71 852 aa17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 SNX7Q9UNH6 387 aa17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 ZNF711Q9Y462 761 aa17.65■□□□□ 0.42
CHCHD3-203ENST00000448878 NBPF19A0A087WUL8 3843 aa17.64■□□□□ 0.41
CHCHD3-203ENST00000448878 TMEM63AO94886 807 aa17.64■□□□□ 0.41
CHCHD3-203ENST00000448878 DCDC1P59894 354 aa17.64■□□□□ 0.41
CHCHD3-203ENST00000448878 HSD11B2P80365 405 aa17.64■□□□□ 0.41
CHCHD3-203ENST00000448878 GBE1Q04446 702 aa17.64■□□□□ 0.41
CHCHD3-203ENST00000448878 GPR19Q15760 415 aa17.64■□□□□ 0.41
CHCHD3-203ENST00000448878 FILIP1LQ4L180 1135 aa17.64■□□□□ 0.41
CHCHD3-203ENST00000448878 KHDC1Q4VXA5 237 aaKnown RBP17.64■□□□□ 0.41
CHCHD3-203ENST00000448878 ARMC6Q6NXE6 501 aa17.64■□□□□ 0.41
CHCHD3-203ENST00000448878 MAP7D3Q8IWC1 876 aa17.64■□□□□ 0.41
CHCHD3-203ENST00000448878 RHOT1Q8IXI2 618 aa17.64■□□□□ 0.41
CHCHD3-203ENST00000448878 FDCSPQ8NFU4 85 aa17.64■□□□□ 0.41
CHCHD3-203ENST00000448878 GPR150Q8NGU9 434 aa17.64■□□□□ 0.41
CHCHD3-203ENST00000448878 FATE1Q969F0 183 aa17.64■□□□□ 0.41
CHCHD3-203ENST00000448878 CEP41Q9BYV8 373 aa17.64■□□□□ 0.41
CHCHD3-203ENST00000448878 CHST8Q9H2A9 424 aa17.64■□□□□ 0.41
CHCHD3-203ENST00000448878 MAGEE1Q9HCI5 957 aa17.64■□□□□ 0.41
CHCHD3-203ENST00000448878 KCND1Q9NSA2 647 aa17.64■□□□□ 0.41
CHCHD3-203ENST00000448878 SOHLH2Q9NX45 425 aa17.64■□□□□ 0.41
CHCHD3-203ENST00000448878 SPTBN1Q01082 2364 aaKnown RBP17.64■□□□□ 0.41
CHCHD3-203ENST00000448878 NOTCH2Q04721 2471 aa17.63■□□□□ 0.41
CHCHD3-203ENST00000448878 DDX3YO15523 660 aaKnown RBP17.63■□□□□ 0.41
CHCHD3-203ENST00000448878 KRT86O43790 486 aa17.63■□□□□ 0.41
CHCHD3-203ENST00000448878 BPIP17213 487 aa17.63■□□□□ 0.41
CHCHD3-203ENST00000448878 LPOP22079 712 aaPredicted RBP17.63■□□□□ 0.41
CHCHD3-203ENST00000448878 VARSP26640 1264 aaKnown RBP17.63■□□□□ 0.41
CHCHD3-203ENST00000448878 DCTP40126 519 aa17.63■□□□□ 0.41
CHCHD3-203ENST00000448878 GPS2Q13227 327 aa17.63■□□□□ 0.41
CHCHD3-203ENST00000448878 RAPSNQ13702 412 aa17.63■□□□□ 0.41
CHCHD3-203ENST00000448878 NFKBIBQ15653 356 aa17.63■□□□□ 0.41
CHCHD3-203ENST00000448878 TMTC4Q5T4D3 741 aa17.63■□□□□ 0.41
CHCHD3-203ENST00000448878 KMT5CQ86Y97 462 aa17.63■□□□□ 0.41
CHCHD3-203ENST00000448878 ENDOVQ8N8Q3 282 aaKnown RBP17.63■□□□□ 0.41
CHCHD3-203ENST00000448878 HDAC11Q96DB2 347 aa17.63■□□□□ 0.41
CHCHD3-203ENST00000448878 CLIP3Q96DZ5 547 aa17.63■□□□□ 0.41
CHCHD3-203ENST00000448878 NUDT9Q9BW91 350 aa17.63■□□□□ 0.41
CHCHD3-203ENST00000448878 RTN4Q9NQC3 1192 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms