RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 IL17RCQ8NAC3 791 aa21.79■■□□□ 1.08
VSX1-205ENST00000429762 RHEBL1Q8TAI7 183 aa21.79■■□□□ 1.08
VSX1-205ENST00000429762 STAG3L4Q8TBR4 150 aa21.79■■□□□ 1.08
VSX1-205ENST00000429762 CXorf40AQ8TE69 158 aa21.79■■□□□ 1.08
VSX1-205ENST00000429762 RAD18Q9NS91 495 aa21.79■■□□□ 1.08
VSX1-205ENST00000429762 UTP6Q9NYH9 597 aaKnown RBP21.79■■□□□ 1.08
VSX1-205ENST00000429762 NFKBIL1Q9UBC1 381 aaPredicted RBP21.79■■□□□ 1.08
VSX1-205ENST00000429762 ZDHHC2Q9UIJ5 367 aa21.79■■□□□ 1.08
VSX1-205ENST00000429762 MYO10Q9HD67 2058 aa21.79■■□□□ 1.08
VSX1-205ENST00000429762 H0Y858 1186 aa21.79■■□□□ 1.08
VSX1-205ENST00000429762 PSMD11O00231 422 aa21.79■■□□□ 1.08
VSX1-205ENST00000429762 GFAPP14136 432 aa21.79■■□□□ 1.08
VSX1-205ENST00000429762 ATP1B2P14415 290 aaPredicted RBP21.79■■□□□ 1.08
VSX1-205ENST00000429762 HK3P52790 923 aa21.79■■□□□ 1.08
VSX1-205ENST00000429762 ASPHQ12797 758 aa21.79■■□□□ 1.08
VSX1-205ENST00000429762 TMEM52BQ4KMG9 183 aa21.79■■□□□ 1.08
VSX1-205ENST00000429762 MTDHQ86UE4 582 aaKnown RBP21.79■■□□□ 1.08
VSX1-205ENST00000429762 SUGP1Q8IWZ8 645 aaKnown RBP21.79■■□□□ 1.08
VSX1-205ENST00000429762 HDDC3Q8N4P3 179 aa21.79■■□□□ 1.08
VSX1-205ENST00000429762 ERP27Q96DN0 273 aa21.79■■□□□ 1.08
VSX1-205ENST00000429762 PLCD4Q9BRC7 762 aa21.79■■□□□ 1.08
VSX1-205ENST00000429762 CDH19Q9H159 772 aa21.79■■□□□ 1.08
VSX1-205ENST00000429762 FAM8A1Q9UBU6 413 aa21.79■■□□□ 1.08
VSX1-205ENST00000429762 RGSL1A5PLK6 1076 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 OR2AG2A6NM03 316 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 TMEM233B4DJY2 109 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 TPBGLP0DKB5 382 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 MSH3P20585 1137 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 SERPINB3P29508 390 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 NTSR1P30989 418 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 CCR7P32248 378 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 COPAP53621 1224 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 TAS2R38P59533 333 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 RPS14P62263 151 aaKnown RBP21.78■■□□□ 1.08
VSX1-205ENST00000429762 UNC50Q53HI1 259 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 AGBL4Q5VU57 503 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 WDR75Q8IWA0 830 aaKnown RBP21.78■■□□□ 1.08
VSX1-205ENST00000429762 NRSN1Q8IZ57 195 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 BTN2A2Q8WVV5 523 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 GLYATL1Q969I3 302 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 MKRN2Q9H000 416 aaKnown RBP21.78■■□□□ 1.08
VSX1-205ENST00000429762 SPATS2LQ9NUQ6 558 aaKnown RBP21.78■■□□□ 1.08
VSX1-205ENST00000429762 KCNK4Q9NYG8 393 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 NPHS1O60500 1241 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 RNASEH1O60930 286 aaKnown RBP21.78■■□□□ 1.08
VSX1-205ENST00000429762 SOD1P00441 154 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 CD72P21854 359 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 ZNF678Q5SXM1 525 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 RALGPS2Q86X27 583 aaPredicted RBP21.78■■□□□ 1.08
VSX1-205ENST00000429762 SLC22A9Q8IVM8 553 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 CCDC126Q96EE4 140 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 PPP1R36Q96LQ0 422 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 GSTO2Q9H4Y5 243 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 TNFRSF12AQ9NP84 129 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 ADAMTS6Q9UKP5 1117 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 RAP2CQ9Y3L5 183 aa21.78■■□□□ 1.08
VSX1-205ENST00000429762 SGTAO43765 313 aa21.77■■□□□ 1.08
VSX1-205ENST00000429762 SUPT7LO94864 414 aa21.77■■□□□ 1.08
VSX1-205ENST00000429762 OR56A5P0C7T3 313 aa21.77■■□□□ 1.08
VSX1-205ENST00000429762 IMPDH1P20839 514 aa21.77■■□□□ 1.08
VSX1-205ENST00000429762 RAET1GQ6H3X3 334 aa21.77■■□□□ 1.08
VSX1-205ENST00000429762 FBXO39Q8N4B4 442 aa21.77■■□□□ 1.08
VSX1-205ENST00000429762 DDHD1Q8NEL9 900 aa21.77■■□□□ 1.08
VSX1-205ENST00000429762 MAPK15Q8TD08 544 aa21.77■■□□□ 1.08
VSX1-205ENST00000429762 CDX2Q99626 313 aaPredicted RBP21.77■■□□□ 1.08
VSX1-205ENST00000429762 PHF7Q9BWX1 381 aaPredicted RBP21.77■■□□□ 1.08
VSX1-205ENST00000429762 ILKAPQ9H0C8 392 aaPredicted RBP21.77■■□□□ 1.08
VSX1-205ENST00000429762 KDM4CQ9H3R0 1056 aa21.77■■□□□ 1.08
VSX1-205ENST00000429762 FIS1Q9Y3D6 152 aa21.77■■□□□ 1.08
VSX1-205ENST00000429762 ZNF195O14628 629 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 RNASEH2AO75792 299 aaKnown RBP21.76■■□□□ 1.07
VSX1-205ENST00000429762 HOXB2P14652 356 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 AGTR2P50052 363 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 CDH13P55290 713 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 ZBTB16Q05516 673 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 ZNF776Q68DI1 518 aaPredicted RBP21.76■■□□□ 1.07
VSX1-205ENST00000429762 GPSM1Q86YR5 675 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 RASGEF1AQ8N9B8 481 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 OR2T3Q8NH03 318 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 GANCQ8TET4 914 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 ESAMQ96AP7 390 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 NSUN5Q96P11 429 aaKnown RBP21.76■■□□□ 1.07
VSX1-205ENST00000429762 LRRC37BQ96QE4 947 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 CNOT6Q9ULM6 557 aaKnown RBP21.76■■□□□ 1.07
VSX1-205ENST00000429762 PRR23AA6NEV1 266 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 IGLON5A6NGN9 336 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 DCTN3O75935 186 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 PCDH8O95206 1070 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 CTSCP53634 463 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 NFKB2Q00653 900 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 GRSF1Q12849 480 aaKnown RBP eCLIP21.76■■□□□ 1.07
VSX1-205ENST00000429762 BOP1Q14137 746 aaKnown RBP21.76■■□□□ 1.07
VSX1-205ENST00000429762 C18orf21Q32NC0 220 aaPredicted RBP21.76■■□□□ 1.07
VSX1-205ENST00000429762 SDE2Q6IQ49 451 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 FRMD7Q6ZUT3 714 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 CYP2U1Q7Z449 544 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 MYO1HQ8N1T3 1032 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 PLA2G15Q8NCC3 412 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 SKA1Q96BD8 255 aa21.76■■□□□ 1.07
VSX1-205ENST00000429762 L3HYPDHQ96EM0 354 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms