RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 WDFY4Q6ZS81 3184 aa4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 CHD7Q9P2D1 2997 aa4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 TRANK1O15050 2925 aa4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 GBF1Q92538 1859 aa4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 ATXN2Q99700 1313 aaKnown RBP4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 XPNPEP2O43895 674 aa4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 CNMDO75829 334 aa4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 PCNAP12004 261 aa4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 NLRP5P59047 1200 aa4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 ZNF155Q12901 538 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 ITGADQ13349 1161 aa4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 SLC12A1Q13621 1099 aa4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 MVPQ14764 893 aaKnown RBP4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 OASLQ15646 514 aaKnown RBP4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 AMZ1Q400G9 498 aa4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 STPG1Q5TH74 334 aa4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 SMIM29Q86T20 159 aa4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 WDR63Q8IWG1 891 aa4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 MAB21L3Q8N8X9 362 aa4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 ZNF441Q8N8Z8 693 aa4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 SNAPC3Q92966 411 aa4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 NSUN4Q96CB9 384 aaKnown RBP4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 TWNKQ96RR1 684 aa4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 SPATC1LQ9H0A9 340 aa4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 ZNF224Q9NZL3 707 aa4.84□□□□□ -1.63
HMGB3P5-201ENST00000428894 A0A0U1RQF3 1178 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 PRR23AA6NEV1 266 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 TSPAN3O60637 253 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 SLC25A27O95847 323 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 PGK1P00558 417 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 LINC00271P0C7V0 271 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 CSF2RAP15509 400 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 ITGAXP20702 1163 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 ZNF132P52740 706 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 ACLYP53396 1101 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 CLDN2P57739 230 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 EFNB3Q15768 340 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 GORABQ5T7V8 394 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 ATG9AQ7Z3C6 839 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 FAM160B2Q86V87 743 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 DCUN1D3Q8IWE4 304 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 KIAA2013Q8IYS2 634 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 SPATA5Q8NB90 893 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 TANKQ92844 425 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 REEP2Q9BRK0 252 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 MOV10L1Q9BXT6 1211 aaKnown RBP4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 RPAP3Q9H6T3 665 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 EBF2Q9HAK2 575 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 SMYD2Q9NRG4 433 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 CISD1Q9NZ45 108 aaKnown RBP4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 RAI14Q9P0K7 980 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 SIX4Q9UIU6 781 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 TBX21Q9UL17 535 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 NFE2L3Q9Y4A8 694 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 ZNF236Q9UL36 1845 aa4.83□□□□□ -1.64
HMGB3P5-201ENST00000428894 PTPRCP08575 1304 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 A0A0G2JPF8 293 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 HNRNPCL3B7ZW38 293 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 HNRNPCL1O60812 293 aaKnown RBP4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 NBNO60934 754 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 DUSP11O75319 330 aaKnown RBP4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 GH2P01242 217 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 HNRNPCL4P0DMR1 293 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 HNRNPH1P31943 449 aaKnown RBP4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 STX2P32856 288 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 COPB2P35606 906 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 BRWD1-AS2P59051 145 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 TIMM10P62072 90 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 TROAPQ12815 778 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 ZBTB17Q13105 803 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 EFR3AQ14156 821 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 NEDD9Q14511 834 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 KCTD2Q14681 263 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 FBXO47Q5MNV8 452 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 PAPPA-AS1Q5QFB9 102 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 NAA16Q6N069 864 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 TATDN1Q6P1N9 297 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 GDPD4Q6W3E5 623 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 ADGRG6Q86SQ4 1221 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 FAM9BQ8IZU0 186 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 KLHDC9Q8NEP7 349 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 FIG4Q92562 907 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 FEM1CQ96JP0 617 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 PYM1Q9BRP8 204 aaKnown RBP4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 NUF2Q9BZD4 464 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 USP44Q9H0E7 712 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 SIL1Q9H173 461 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 PTPRHQ9HD43 1115 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 AATFQ9NY61 560 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 IL1RAPL1Q9NZN1 696 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 PEMTQ9UBM1 199 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 CTNNAL1Q9UBT7 734 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 VDAC3Q9Y277 283 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 MTCH2Q9Y6C9 303 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 USP34Q70CQ2 3546 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 MYH1P12882 1939 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 WDR81Q562E7 1941 aa4.82□□□□□ -1.64
HMGB3P5-201ENST00000428894 ROBO3Q96MS0 1386 aa4.81□□□□□ -1.64
HMGB3P5-201ENST00000428894 LRRC37A2A6NM11 1700 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms