RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 V9GYY5 206 aaPredicted RBP4.94□□□□□ -1.62
GABPB1-204ENST00000396464 CGB1A6NKQ9 187 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 C3orf70A6NLC5 250 aaPredicted RBP4.93□□□□□ -1.62
GABPB1-204ENST00000396464 CASC3O15234 703 aaKnown RBP4.93□□□□□ -1.62
GABPB1-204ENST00000396464 SLC16A3O15427 465 aaKnown RBP4.93□□□□□ -1.62
GABPB1-204ENST00000396464 ZWINTO95229 277 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 CXCL14O95715 111 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 HEXAP06865 529 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 EBLN1P0CF75 366 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 KLRC2P26717 231 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 CDC25CP30307 473 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 WNT5AP41221 380 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 GZMKP49863 264 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 SERPINH1P50454 418 aaKnown RBP4.93□□□□□ -1.62
GABPB1-204ENST00000396464 HADHBP55084 474 aaKnown RBP4.93□□□□□ -1.62
GABPB1-204ENST00000396464 GIT2Q14161 759 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 NEDD9Q14511 834 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 NAB2Q15742 525 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 VWC2Q2TAL6 325 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 NADK2Q4G0N4 442 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 IQCCQ4KMZ1 466 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 TCTE1Q5JU00 501 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 ANKS6Q68DC2 871 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 SULT1C3Q6IMI6 304 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 SLC27A1Q6PCB7 646 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 METAP1DQ6UB28 335 aaPredicted RBP4.93□□□□□ -1.62
GABPB1-204ENST00000396464 ZNF551Q7Z340 670 aaPredicted RBP4.93□□□□□ -1.62
GABPB1-204ENST00000396464 RNF144BQ7Z419 303 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 EXOC3L1Q86VI1 746 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 FAM184AQ8NB25 1140 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 AKR7LQ8NHP1 331 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 NCOA7Q8NI08 942 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 MIPOL1Q8TD10 442 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 SELENOMQ8WWX9 145 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 GCDHQ92947 438 aaPredicted RBP4.93□□□□□ -1.62
GABPB1-204ENST00000396464 NACC2Q96BF6 587 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 RRNAD1Q96FB5 475 aaKnown RBP4.93□□□□□ -1.62
GABPB1-204ENST00000396464 BSCL2Q96G97 398 aaPredicted RBP4.93□□□□□ -1.62
GABPB1-204ENST00000396464 RPL10LQ96L21 214 aaKnown RBP4.93□□□□□ -1.62
GABPB1-204ENST00000396464 KLHL5Q96PQ7 755 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 CRAMP1Q96RY5 1269 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 SECISBP2Q96T21 854 aaKnown RBP4.93□□□□□ -1.62
GABPB1-204ENST00000396464 ZBTB18Q99592 522 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 EPC1Q9H2F5 836 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 SLCO5A1Q9H2Y9 848 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 VSX1Q9NZR4 365 aaPredicted RBP4.93□□□□□ -1.62
GABPB1-204ENST00000396464 KCNN3Q9UGI6 736 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 IL17BQ9UHF5 180 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 SNX7Q9UNH6 387 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 DLGAP4Q9Y2H0 992 aa4.93□□□□□ -1.62
GABPB1-204ENST00000396464 A0A0B4J293 547 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 A0A1W2PRX2 142 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 TARSL2A2RTX5 802 aaKnown RBP4.92□□□□□ -1.62
GABPB1-204ENST00000396464 MFSD2BA6NFX1 497 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 MED7O43513 233 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 CCNT1O60563 726 aaKnown RBP4.92□□□□□ -1.62
GABPB1-204ENST00000396464 RAMP2O60895 175 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 IDH1O75874 414 aaKnown RBP4.92□□□□□ -1.62
GABPB1-204ENST00000396464 ADAP00813 363 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 ITGB1P05556 798 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 IRF1P10914 325 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 ANXA8P13928 327 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 TCF4P15884 667 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 ANXA7P20073 488 aaKnown RBP4.92□□□□□ -1.62
GABPB1-204ENST00000396464 NR1D1P20393 614 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 PPIFP30405 207 aaKnown RBP4.92□□□□□ -1.62
GABPB1-204ENST00000396464 TIA1P31483 386 aaKnown RBP eCLIP4.92□□□□□ -1.621e-7■□□□□ 8.2
GABPB1-204ENST00000396464 DGKQP52824 942 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 CARD18P57730 90 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 NANOS3P60323 173 aaKnown RBP4.92□□□□□ -1.62
GABPB1-204ENST00000396464 SRP54P61011 504 aaKnown RBP4.92□□□□□ -1.62
GABPB1-204ENST00000396464 GPC5P78333 572 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 GALK2Q01415 458 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 PIGFQ07326 219 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 TRDNQ13061 729 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 SNTB2Q13425 540 aaKnown RBP4.92□□□□□ -1.62
GABPB1-204ENST00000396464 TSTA3Q13630 321 aaPredicted RBP4.92□□□□□ -1.62
GABPB1-204ENST00000396464 E2F2Q14209 437 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 ERCC6LQ2NKX8 1250 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 TDRD12Q587J7 1177 aaKnown RBP4.92□□□□□ -1.62
GABPB1-204ENST00000396464 FBXO48Q5FWF7 155 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 ANXA8L1Q5VT79 327 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 KRT40Q6A162 431 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 ACSM6Q6P461 480 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 TEX38Q6PEX7 206 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 PAPD4Q6PIY7 484 aaKnown RBP4.92□□□□□ -1.62
GABPB1-204ENST00000396464 SIAH3Q8IW03 269 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 ZNF595Q8IYB9 648 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 GPR135Q8IZ08 494 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 GHDCQ8N2G8 530 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 CLEC1AQ8NC01 280 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 FBXO32Q969P5 355 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 NXNL1Q96CM4 212 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 SNRNP40Q96DI7 357 aaKnown RBP4.92□□□□□ -1.62
GABPB1-204ENST00000396464 RNF31Q96EP0 1072 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 USP28Q96RU2 1077 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 MPHOSPH9Q99550 1183 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 SSX3Q99909 188 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 ASCL2Q99929 193 aa4.92□□□□□ -1.62
GABPB1-204ENST00000396464 LZTS2Q9BRK4 669 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms