RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 BRSK1Q8TDC3 778 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 ASZ1Q8WWH4 475 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 MAGEH1Q9H213 219 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 ZDHHC6Q9H6R6 413 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 IPPKQ9H8X2 491 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 ING3Q9NXR8 418 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 TELO2Q9Y4R8 837 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 NPEPPSL1A6NEC2 478 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 A8MX80 341 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 TYROBPO43914 113 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 TBL1XO60907 577 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 ESR1P03372 595 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 BMP7P18075 431 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 ITGAXP20702 1163 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 PSMA1P25786 263 aaKnown RBP8.31□□□□□ -1.08
VPS36-201ENST00000378060 THOP1P52888 689 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 SMAD3P84022 425 aaKnown RBP8.31□□□□□ -1.08
VPS36-201ENST00000378060 MERTKQ12866 999 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 SIM2Q14190 667 aaPredicted RBP8.31□□□□□ -1.08
VPS36-201ENST00000378060 BTG3Q14201 252 aaPredicted RBP8.31□□□□□ -1.08
VPS36-201ENST00000378060 UBE2R2Q712K3 238 aaPredicted RBP8.31□□□□□ -1.08
VPS36-201ENST00000378060 MPP5Q8N3R9 675 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 FCGR1BQ92637 280 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 PPCDCQ96CD2 204 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 SNX27Q96L92 541 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 C1QTNF7Q9BXJ2 289 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 DNAJC11Q9NVH1 559 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 INTS10Q9NVR2 710 aaKnown RBP8.31□□□□□ -1.08
VPS36-201ENST00000378060 GIN1Q9NXP7 522 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 PDP1Q9P0J1 537 aaPredicted RBP8.31□□□□□ -1.08
VPS36-201ENST00000378060 CNTN3Q9P232 1028 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 DNAJB9Q9UBS3 223 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 PPM1HQ9ULR3 514 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 ADAMDEC1O15204 470 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 MPZL2O60487 215 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 CLDN9O95484 217 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 ZBTB11O95625 1053 aaPredicted RBP8.31□□□□□ -1.08
VPS36-201ENST00000378060 IMPDH1P20839 514 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 TLX1P31314 330 aaPredicted RBP8.31□□□□□ -1.08
VPS36-201ENST00000378060 BRCC3P46736 316 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 TM4SF4P48230 202 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 CXCR3P49682 368 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 INHBEP58166 350 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 CACNG1Q06432 222 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 IL10RBQ08334 325 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 PEX6Q13608 980 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 EML3Q32P44 896 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 ZBED5Q49AG3 693 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 SLC9B1Q4ZJI4 515 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 PYDC2Q56P42 97 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 PAOXQ6QHF9 649 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 KCTD8Q6ZWB6 473 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 VN1R5Q7Z5H4 357 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 C11orf65Q8NCR3 313 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 HPS1Q92902 700 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 PPP1R16AQ96I34 528 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 FNDC11Q9BVV2 318 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 LRRC3Q9BY71 257 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 TFB2MQ9H5Q4 396 aaKnown RBP8.31□□□□□ -1.08
VPS36-201ENST00000378060 ZFYVE1Q9HBF4 777 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 MIOSQ9NXC5 875 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 MRPL39Q9NYK5 338 aaKnown RBP8.31□□□□□ -1.08
VPS36-201ENST00000378060 PEX16Q9Y5Y5 336 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 TCRBV7S3A2A0A539 114 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 PIP5K1BO14986 540 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 FAM189A1O60320 539 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 CYP7B1O75881 506 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 TRBC1P01850 177 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 TRIM32Q13049 653 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 CA9Q16790 459 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 CNSTQ6PJW8 725 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 PRR23BQ6ZRT6 265 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 NANOGNBQ7Z5D8 188 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 GPR142Q7Z601 462 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 CRYBG2Q8N1P7 616 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 MINDY2Q8NBR6 621 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 LPPQ93052 612 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 BORCS6Q96GS4 357 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 APOLD1Q96LR9 279 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 TMEM106CQ9BVX2 250 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 KAT8Q9H7Z6 458 aaKnown RBP8.31□□□□□ -1.08
VPS36-201ENST00000378060 TRNAU1APQ9NX07 287 aaKnown RBP8.31□□□□□ -1.08
VPS36-201ENST00000378060 RNF186Q9NXI6 227 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 OGDHLQ9ULD0 1010 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 PLXNA1Q9UIW2 1896 aa8.31□□□□□ -1.08
VPS36-201ENST00000378060 FAM234BA2RU67 622 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 ZNF487B1APH4 448 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 UGT1A9O60656 530 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 XYLBO75191 536 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 LRATO95237 230 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 MT-CYBP00156 380 aaPredicted RBP8.3□□□□□ -1.08
VPS36-201ENST00000378060 FABP3P05413 133 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 CYP4B1P13584 511 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 XRCC1P18887 633 aaPredicted RBP8.3□□□□□ -1.08
VPS36-201ENST00000378060 PTGER3P43115 390 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 PSMD4P55036 377 aaKnown RBP8.3□□□□□ -1.08
VPS36-201ENST00000378060 TUBA4AP68366 448 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 ZSWIM7Q19AV6 140 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 FAM151BQ6UXP7 276 aa8.3□□□□□ -1.08
VPS36-201ENST00000378060 ADGRG6Q86SQ4 1221 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms