RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 TMEM202A6NGA9 273 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 ZC3H11AO75152 810 aaKnown RBP eCLIP5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 TPPPO94811 219 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 EPN2O95208 641 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 SRPRAP08240 638 aaKnown RBP5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 SELLP14151 372 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 HOXA13P31271 388 aaPredicted RBP5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 ALDH7A1P49419 539 aaKnown RBP5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 PMS2P54278 862 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 MFAP4P55083 255 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 P2RX3P56373 397 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 ADIPOQQ15848 244 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 SOWAHCQ53LP3 525 aaPredicted RBP5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 DCAF6Q58WW2 860 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 CAVIN4Q5BKX8 364 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 PMS2CLQ68D20 193 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 ZNF626Q68DY1 528 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 ZNF280DQ6N043 979 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 SLC30A6Q6NXT4 461 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 PDXDC1Q6P996 788 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 SHC4Q6S5L8 630 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 PARM1Q6UWI2 310 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 CFAP77Q6ZQR2 320 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 PIP4P1Q86T03 277 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 PRPF39Q86UA1 669 aaKnown RBP5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 LINC00346Q8IVM7 164 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 HJURPQ8NCD3 748 aaPredicted RBP5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 GABPB2Q8TAK5 448 aaPredicted RBP5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 ARRDC2Q8TBH0 407 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 IGSF8Q969P0 613 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 RRNAD1Q96FB5 475 aaKnown RBP5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 TEX12Q9BXU0 123 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 IFIH1Q9BYX4 1025 aaKnown RBP5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 TXLNGYQ9BZA5 131 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 TRNAU1APQ9NX07 287 aaKnown RBP5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 TUBA8Q9NY65 449 aaPredicted RBP5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 MRPL15Q9P015 296 aaKnown RBP5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 ERVK-11Q9UQG0 969 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 RFX7Q2KHR2 1363 aa5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 ARHGEF17Q96PE2 2063 aaPredicted RBP5.67□□□□□ -1.5
RNU4-39P-201ENST00000362455 UNC80Q8N2C7 3258 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 RBBP6Q7Z6E9 1792 aaKnown RBP5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 SH2B2O14492 632 aaPredicted RBP5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 ADAM20O43506 726 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 LDB2O43679 373 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 FRAT2O75474 233 aaPredicted RBP5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 NDUFB4O95168 129 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 SAT1P21673 171 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 PON1P27169 355 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 ADORA1P30542 326 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 THPOP40225 353 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 NRIP1P48552 1158 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 RASSF2P50749 326 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 UBXN2AP68543 259 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 TFAP4Q01664 338 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 SRSF1Q07955 248 aaKnown RBP eCLIP5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 ACSM2AQ08AH3 577 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 RBMS2Q15434 407 aaKnown RBP5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 SRSF7Q16629 238 aaKnown RBP eCLIP5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 PCGF3Q3KNV8 242 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 MMEL1Q495T6 779 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 BMP2KLQ5H9B9 411 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 MTX3Q5HYI7 312 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 WASHC2DQ5SRD0 308 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 LRIF1Q5T3J3 769 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 MORN5Q5VZ52 161 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 ACSM2BQ68CK6 577 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 GPR139Q6DWJ6 353 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 ANKRD54Q6NXT1 300 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 KRT74Q7RTS7 529 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 TRAPPC11Q7Z392 1133 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 PALB2Q86YC2 1186 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 RNF168Q8IYW5 571 aaPredicted RBP5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 SCYL3Q8IZE3 742 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 DEFB123Q8N688 67 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 ANKRD13CQ8N6S4 541 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 SCCPDHQ8NBX0 429 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 C16orf52Q8NHV5 167 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 MPLKIPQ8TAP9 179 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 PIGOQ8TEQ8 1089 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 SLC22A18Q96BI1 424 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 APOLD1Q96LR9 279 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 PARK7Q99497 189 aaKnown RBP5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 SEPT5Q99719 369 aaPredicted RBP5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 IDI2Q9BXS1 227 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 GPR108Q9NPR9 543 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 SIRT3Q9NTG7 399 aaPredicted RBP5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 MTMR10Q9NXD2 777 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 TMOD2Q9NZR1 351 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 NFKBIL1Q9UBC1 381 aaPredicted RBP5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 R3HDM2Q9Y2K5 976 aaKnown RBP5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 STON1Q9Y6Q2 735 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 PFASO15067 1338 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 KIF16BQ96L93 1317 aa5.66□□□□□ -1.5
RNU4-39P-201ENST00000362455 TTC28Q96AY4 2481 aa5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 LAMA2P24043 3122 aaKnown RBP5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 C1orf226A1L170 272 aa5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 KDM4EB2RXH2 506 aaPredicted RBP5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 AKR1B15C9JRZ8 316 aaPredicted RBP5.65□□□□□ -1.5
RNU4-39P-201ENST00000362455 FTCDO95954 541 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms