RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 ERVK-6Q9BXR3 956 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 RHBGQ9H310 441 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 FANCEQ9HB96 536 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 CCDC162PA2VCL2 907 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 NEMP2A6NFY4 417 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 C9JVG2 144 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 BCKDKO14874 412 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 FGBP02675 491 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 CTSEP14091 401 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 NSG1P42857 185 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 CTSKP43235 329 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 SIM2Q14190 667 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 LPIN1Q14693 890 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 FBXO48Q5FWF7 155 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 ARMC3Q5W041 872 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 CES5AQ6NT32 575 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 ZC3HC1Q86WB0 502 aaKnown RBP16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 CIR1Q86X95 450 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 MCFD2Q8NI22 146 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 CRISPLD1Q9H336 500 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 MFSD1Q9H3U5 465 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 CCDC189A1A4V9 331 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 FKTNO75072 461 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 NOVP48745 357 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 PNLIPRP1P54315 467 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 MLLT6P55198 1093 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 ELP6Q0PNE2 266 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 SLC51AQ86UW1 340 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 NPY6RQ99463 290 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 GPR22Q99680 433 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 C1orf21Q9H246 121 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 C1orf109Q9NX04 203 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 ZNF624Q9P2J8 865 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 SSR3Q9UNL2 185 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 ISM1B1AKI9 464 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 RGS10O43665 173 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 RPS6KA3P51812 740 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 RGS1Q08116 209 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 MED22Q15528 200 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 C11orf88Q6PI97 169 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 KLHL17Q6TDP4 642 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 PTCHD4Q6ZW05 846 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 DNAJB8Q8NHS0 232 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 HM13Q8TCT9 377 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 HBEGFQ99075 208 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 ATG10Q9H0Y0 220 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 EBF3Q9H4W6 596 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 VRTNQ9H8Y1 702 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 C3orf14Q9HBI5 128 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 FPGTO14772 594 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 ANGPTL1O95841 491 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 HLA-DQB2P05538 268 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 ANXA4P09525 319 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 AQP1P29972 269 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 CCR4P51679 360 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 ERVK-8P63133 956 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 IRF9Q00978 393 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 TMEM63BQ5T3F8 832 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 CRTC3Q6UUV7 619 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 TEX47Q8TBZ9 253 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 EMID1Q96A84 441 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 CXorf21Q9HAI6 301 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 PDP1Q9P0J1 537 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 DEC1Q9P2X7 70 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 SESN1Q9Y6P5 492 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 SLC28A2O43868 658 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 TMCC2O75069 709 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 NUDT14O95848 222 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 DLG1Q12959 904 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 CHIT1Q13231 466 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 BIKQ13323 160 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 TMEM198Q66K66 360 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 DENND5AQ6IQ26 1287 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 CHPFQ8IZ52 775 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 SLC13A3Q8WWT9 602 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 AP2M1Q96CW1 435 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 RNF39Q9H2S5 420 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 OGDHLQ9ULD0 1010 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 PPEF2O14830 753 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 ITM2AO43736 263 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 STBD1O95210 358 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 MT-ND1P03886 318 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 CYP4F2P78329 520 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 CYP4F3Q08477 520 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 CBX2Q14781 532 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 SAPCD2Q86UD0 394 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 SVOPLQ8N434 492 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 WDR48Q8TAF3 677 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 EBF2Q9HAK2 575 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 PTTG2Q9NZH5 202 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 SLC17A6Q9P2U8 582 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 SPATA2Q9UM82 520 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 C8GP07360 202 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 BUD31P41223 144 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 CSNK2BP67870 215 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 GALNT2Q10471 571 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 MTAPQ13126 283 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 CCNYL2Q5T2Q4 361 aa16.91■□□□□ 0.3
TRAPPC11-201ENST00000334690 EMC10Q5UCC4 262 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms