RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 PPP1R2P1Q96PQ5 205 aa17.46■□□□□ 0.39
HDDC3-201ENST00000330334 SPRY4Q9C004 299 aa17.46■□□□□ 0.39
HDDC3-201ENST00000330334 LACRTQ9GZZ8 138 aa17.46■□□□□ 0.39
HDDC3-201ENST00000330334 POT1Q9NUX5 634 aa17.46■□□□□ 0.39
HDDC3-201ENST00000330334 SMOXQ9NWM0 555 aa17.46■□□□□ 0.39
HDDC3-201ENST00000330334 MN1Q10571 1320 aaPredicted RBP17.46■□□□□ 0.38
HDDC3-201ENST00000330334 GLYATL1P3A0A0U1RQE8 302 aa17.45■□□□□ 0.38
HDDC3-201ENST00000330334 C5orf60A6NFR6 353 aa17.45■□□□□ 0.38
HDDC3-201ENST00000330334 STK10O94804 968 aaKnown RBP17.45■□□□□ 0.38
HDDC3-201ENST00000330334 BRAFP15056 766 aa17.45■□□□□ 0.38
HDDC3-201ENST00000330334 ADRA1AP35348 466 aa17.45■□□□□ 0.38
HDDC3-201ENST00000330334 VAV2P52735 878 aa17.45■□□□□ 0.38
HDDC3-201ENST00000330334 NAP1L1P55209 391 aaKnown RBP17.45■□□□□ 0.38
HDDC3-201ENST00000330334 OTUD4Q01804 1114 aaKnown RBP17.45■□□□□ 0.38
HDDC3-201ENST00000330334 RAD9BQ6WBX8 426 aa17.45■□□□□ 0.38
HDDC3-201ENST00000330334 FAM129CQ86XR2 697 aa17.45■□□□□ 0.38
HDDC3-201ENST00000330334 TRAPPC5Q8IUR0 188 aa17.45■□□□□ 0.38
HDDC3-201ENST00000330334 GDAP1Q8TB36 358 aa17.45■□□□□ 0.38
HDDC3-201ENST00000330334 ZNF514Q96K75 400 aaPredicted RBP17.45■□□□□ 0.38
HDDC3-201ENST00000330334 GORASP1Q9BQQ3 440 aa17.45■□□□□ 0.38
HDDC3-201ENST00000330334 TBC1D10AQ9BXI6 508 aa17.45■□□□□ 0.38
HDDC3-201ENST00000330334 ZMYND15Q9H091 742 aa17.45■□□□□ 0.38
HDDC3-201ENST00000330334 SLC40A1Q9NP59 571 aa17.45■□□□□ 0.38
HDDC3-201ENST00000330334 DNAJC16Q9Y2G8 782 aa17.45■□□□□ 0.38
HDDC3-201ENST00000330334 PCDHGA4Q9Y5G9 962 aa17.45■□□□□ 0.38
HDDC3-201ENST00000330334 KLHL33A6NCF5 533 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 C2orf81A6NN90 581 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 PDZK1P1A8MUH7 402 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 GAPDHSO14556 408 aaPredicted RBP17.44■□□□□ 0.38
HDDC3-201ENST00000330334 STX7O15400 261 aaKnown RBP17.44■□□□□ 0.38
HDDC3-201ENST00000330334 UGT1A9O60656 530 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 UBXN7O94888 489 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 AGTP01019 485 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 RBP3P10745 1247 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 UGT1A6P19224 532 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 LPOP22079 712 aaPredicted RBP17.44■□□□□ 0.38
HDDC3-201ENST00000330334 UGT1A1P22309 533 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 UGT1A4P22310 534 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 UGT1A3P35503 534 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 PPM1FP49593 454 aaPredicted RBP17.44■□□□□ 0.38
HDDC3-201ENST00000330334 EIF3EP60228 445 aaKnown RBP17.44■□□□□ 0.38
HDDC3-201ENST00000330334 SRSF6Q13247 344 aaKnown RBP17.44■□□□□ 0.38
HDDC3-201ENST00000330334 PRPSAP1Q14558 356 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 TAF1AQ15573 450 aaPredicted RBP17.44■□□□□ 0.38
HDDC3-201ENST00000330334 ANKRD20A2Q5SQ80 823 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 ANKRD20A1Q5TYW2 823 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 ANKRD20A3Q5VUR7 823 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 FAM151BQ6UXP7 276 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 CEACAM20Q6UY09 585 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 ZNF605Q86T29 641 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 AMZ2Q86W34 360 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 TRIM48Q8IWZ4 208 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 KLHDC8BQ8IXV7 354 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 RASGEF1AQ8N9B8 481 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 ALG3Q92685 438 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 PMEPA1Q969W9 287 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 UGT1A7Q9HAW7 530 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 UGT1A10Q9HAW8 530 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 UGT1A8Q9HAW9 530 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 WDR70Q9NW82 654 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 OGFRQ9NZT2 677 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 EPHA6Q9UF33 1036 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 PILRAQ9UKJ1 303 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 SLC30A1Q9Y6M5 507 aa17.44■□□□□ 0.38
HDDC3-201ENST00000330334 A8MU76 341 aa17.43■□□□□ 0.38
HDDC3-201ENST00000330334 CAPN5O15484 640 aaPredicted RBP17.43■□□□□ 0.38
HDDC3-201ENST00000330334 POP7O75817 140 aaKnown RBP17.43■□□□□ 0.38
HDDC3-201ENST00000330334 PYGMP11217 842 aa17.43■□□□□ 0.38
HDDC3-201ENST00000330334 RPL10P27635 214 aaKnown RBP17.43■□□□□ 0.38
HDDC3-201ENST00000330334 PDE1BQ01064 536 aa17.43■□□□□ 0.38
HDDC3-201ENST00000330334 MSLNQ13421 630 aaPredicted RBP17.43■□□□□ 0.38
HDDC3-201ENST00000330334 LY6DQ14210 128 aa17.43■□□□□ 0.38
HDDC3-201ENST00000330334 PLA2G4EQ3MJ16 856 aa17.43■□□□□ 0.38
HDDC3-201ENST00000330334 SNAP47Q5SQN1 464 aa17.43■□□□□ 0.38
HDDC3-201ENST00000330334 GPRC6AQ5T6X5 926 aa17.43■□□□□ 0.38
HDDC3-201ENST00000330334 ANKS6Q68DC2 871 aa17.43■□□□□ 0.38
HDDC3-201ENST00000330334 VASH2Q86V25 355 aa17.43■□□□□ 0.38
HDDC3-201ENST00000330334 TXLNBQ8N3L3 684 aa17.43■□□□□ 0.38
HDDC3-201ENST00000330334 ZNF398Q8TD17 642 aa17.43■□□□□ 0.38
HDDC3-201ENST00000330334 RTP4Q96DX8 246 aa17.43■□□□□ 0.38
HDDC3-201ENST00000330334 C9orf72Q96LT7 481 aa17.43■□□□□ 0.38
HDDC3-201ENST00000330334 SPATA13Q96N96 652 aa17.43■□□□□ 0.38
HDDC3-201ENST00000330334 BAG1Q99933 345 aaPredicted RBP17.43■□□□□ 0.38
HDDC3-201ENST00000330334 RAB33BQ9H082 229 aa17.43■□□□□ 0.38
HDDC3-201ENST00000330334 C10orf88Q9H8K7 445 aa17.43■□□□□ 0.38
HDDC3-201ENST00000330334 ARNT2Q9HBZ2 717 aa17.43■□□□□ 0.38
HDDC3-201ENST00000330334 FEZ2Q9UHY8 353 aaPredicted RBP17.43■□□□□ 0.38
HDDC3-201ENST00000330334 SDK2Q58EX2 2172 aa17.42■□□□□ 0.38
HDDC3-201ENST00000330334 GRID2IPA4D2P6 1211 aa17.42■□□□□ 0.38
HDDC3-201ENST00000330334 AGAP14A8MT82 685 aa17.42■□□□□ 0.38
HDDC3-201ENST00000330334 F5H423 210 aaPredicted RBP17.42■□□□□ 0.38
HDDC3-201ENST00000330334 AMD1P17707 334 aa17.42■□□□□ 0.38
HDDC3-201ENST00000330334 WT1P19544 449 aaPredicted RBP17.42■□□□□ 0.38
HDDC3-201ENST00000330334 MAP4P27816 1152 aaKnown RBP17.42■□□□□ 0.38
HDDC3-201ENST00000330334 HALP42357 657 aa17.42■□□□□ 0.38
HDDC3-201ENST00000330334 MAPK9P45984 424 aa17.42■□□□□ 0.38
HDDC3-201ENST00000330334 CLCA4Q14CN2 919 aa17.42■□□□□ 0.38
HDDC3-201ENST00000330334 LONRF2Q1L5Z9 754 aa17.42■□□□□ 0.38
HDDC3-201ENST00000330334 LINC00303Q3SY05 128 aa17.42■□□□□ 0.38
HDDC3-201ENST00000330334 DARS2Q6PI48 645 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms