RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 IRF9Q00978 393 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 COLEC12Q5KU26 742 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 ADAMTS15Q8TE58 950 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 UBE2E3Q969T4 207 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 ZCCHC11Q5TAX3 1644 aaKnown RBP16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 ERN1O75460 977 aaKnown RBP16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 ALOX5P09917 674 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 ATXN1P54253 815 aaKnown RBP16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 CSTF1Q05048 431 aaKnown RBP16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 LSM12Q3MHD2 195 aaKnown RBP16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 TMEM86AQ8N2M4 240 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 CPXM1Q96SM3 734 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 TRIM17Q9Y577 477 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 REREQ9P2R6 1566 aa16.67■□□□□ 0.26
TSPAN3-201ENST00000267970 PRKCIP41743 596 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 CD83Q01151 205 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 OGFRL1Q5TC84 451 aaPredicted RBP16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 OR10Q1Q8NGQ4 319 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 ZNF670Q9BS34 389 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 HTATIP2Q9BUP3 242 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 MRPS23Q9Y3D9 190 aaKnown RBP16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 KCNE2Q9Y6J6 123 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 A8MV72 311 aaPredicted RBP16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 CCL16O15467 120 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 TLR5O60602 858 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 MT-CYBP00156 380 aaPredicted RBP16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 AKR1A1P14550 325 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 CDH5P33151 784 aaPredicted RBP16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 IDH3AP50213 366 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 SEC13P55735 322 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 SMU1Q2TAY7 513 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 AAGABQ6PD74 315 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 RTL4Q6ZR62 310 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 TAMM41Q96BW9 452 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 AP2M1Q96CW1 435 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 KREMEN1Q96MU8 473 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 SAMD4AQ9UPU9 718 aaKnown RBP16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 MEIS2O14770 477 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 DHX15O43143 795 aaKnown RBP16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 TGFB3P10600 412 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 RPS9P46781 194 aaKnown RBP16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 GPR153Q6NV75 609 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 TXNDC11Q6PKC3 985 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 TMEM110Q86TL2 294 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 MYO19Q96H55 970 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 SLC6A15Q9H2J7 730 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 ASAH2Q9NR71 780 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 IPO13O94829 963 aaKnown RBP16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 OR4F21O95013 312 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 IFNGP01579 166 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 VARSP26640 1264 aaKnown RBP16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 CRHR1P34998 444 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 VGLL4Q14135 290 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 TMPRSS9Q7Z410 1059 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 SLC51AQ86UW1 340 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 UBR7Q8N806 425 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 IPPKQ9H8X2 491 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 ELOVL7A1L3X0 281 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 PRKCHP24723 683 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 VBP1P61758 197 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 RPL6Q02878 288 aaKnown RBP16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 LIN52Q52LA3 116 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 C12orf50Q8NA57 414 aaPredicted RBP16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 BRD7Q9NPI1 651 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 TVP23BQ9NYZ1 205 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 AP3M1Q9Y2T2 418 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 CEP152O94986 1710 aa16.66■□□□□ 0.26
TSPAN3-201ENST00000267970 WRBO00258 174 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 TM7SF2O76062 418 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 S100GP29377 79 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 CTNNB1P35222 781 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 PSRC1Q6PGN9 363 aaPredicted RBP16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 CFAP206Q8IYR0 622 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 SMPDL3BQ92485 455 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 BARD1Q99728 777 aaKnown RBP16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 RBM4BQ9BQ04 359 aaKnown RBP16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 RBM4Q9BWF3 364 aaKnown RBP16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 DPEP3Q9H4B8 488 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 A0A0G2JPF8 293 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 HNRNPCL3B7ZW38 293 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 PIP5K1BO14986 540 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 HNRNPCL4P0DMR1 293 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 GTF2BQ00403 316 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 DLG1Q12959 904 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 ATP13A5Q4VNC0 1218 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 GCNT6Q5T4J0 391 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 USP30Q70CQ3 517 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 TRIM74Q86UV6 250 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 TRIM73Q86UV7 250 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 PHF13Q86YI8 300 aaPredicted RBP16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 MREGQ8N565 214 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 KCNC2Q96PR1 638 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 COPS8Q99627 209 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 RNF208Q9H0X6 261 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 EIF2B4Q9UI10 523 aaKnown RBP16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 ST3GAL5Q9UNP4 418 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 YARS2Q9Y2Z4 477 aaKnown RBP16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 AHCYP23526 432 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 PSMD8P48556 350 aa16.65■□□□□ 0.26
TSPAN3-201ENST00000267970 AMPD2Q01433 879 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms