RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 PLK4O00444 970 aa17.91■□□□□ 0.46
VIM-201ENST00000224237 SUPT3HO75486 399 aa17.91■□□□□ 0.46
VIM-201ENST00000224237 ITGB6P18564 788 aa17.91■□□□□ 0.46
VIM-201ENST00000224237 MPSTP25325 297 aa17.91■□□□□ 0.46
VIM-201ENST00000224237 BNIP1Q12981 228 aa17.91■□□□□ 0.46
VIM-201ENST00000224237 FRMD7Q6ZUT3 714 aa17.91■□□□□ 0.46
VIM-201ENST00000224237 PTGR2Q8N8N7 351 aaPredicted RBP17.91■□□□□ 0.46
VIM-201ENST00000224237 DDHD1Q8NEL9 900 aa17.91■□□□□ 0.46
VIM-201ENST00000224237 AP2M1Q96CW1 435 aa17.91■□□□□ 0.46
VIM-201ENST00000224237 COQ10AQ96MF6 247 aa17.91■□□□□ 0.46
VIM-201ENST00000224237 EBF4Q9BQW3 602 aa17.91■□□□□ 0.46
VIM-201ENST00000224237 ABCG8Q9H221 673 aa17.91■□□□□ 0.46
VIM-201ENST00000224237 TRPV5Q9NQA5 729 aa17.91■□□□□ 0.46
VIM-201ENST00000224237 TMCO1Q9UM00 188 aa17.91■□□□□ 0.46
VIM-201ENST00000224237 CKAP5Q14008 2032 aa17.91■□□□□ 0.46
VIM-201ENST00000224237 NEMP1O14524 444 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 ZNF195O14628 629 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 RNASEH1O60930 286 aaKnown RBP17.9■□□□□ 0.46
VIM-201ENST00000224237 ATP1B2P14415 290 aaPredicted RBP17.9■□□□□ 0.46
VIM-201ENST00000224237 GM2AP17900 193 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 CTHP32929 405 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 KIR2DL1P43626 348 aaPredicted RBP17.9■□□□□ 0.46
VIM-201ENST00000224237 CCR10P46092 362 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 SCTRP47872 440 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 SEC13P55735 322 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 CAMK2GQ13555 558 aaPredicted RBP17.9■□□□□ 0.46
VIM-201ENST00000224237 SKIV2LQ15477 1246 aaKnown RBP17.9■□□□□ 0.46
VIM-201ENST00000224237 PFKFB4Q16877 469 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 MAVSQ7Z434 540 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 CLNKQ7Z7G1 428 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 ADAMTSL2Q86TH1 951 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 MYO1HQ8N1T3 1032 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 FBXO39Q8N4B4 442 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 RILPQ96NA2 401 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 UBE2ZQ9H832 354 aaPredicted RBP17.9■□□□□ 0.46
VIM-201ENST00000224237 PIKFYVEQ9Y2I7 2098 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 FADS2P1A8MWK0 482 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 SPECC1L-ADORA2AF8WAN1 911 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 SUPT7LO94864 414 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 P2RY2P41231 377 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 ACTN3Q08043 901 aaPredicted RBP17.9■□□□□ 0.46
VIM-201ENST00000224237 TMEM52BQ4KMG9 183 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 LDLRAP1Q5SW96 308 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 Q7L0L9 218 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 ZNF765Q7L2R6 523 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 ALYREFQ86V81 257 aaKnown RBP17.9■□□□□ 0.46
VIM-201ENST00000224237 KIRREL3Q8IZU9 778 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 AGR3Q8TD06 166 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 BTN2A2Q8WVV5 523 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 RSPH9Q9H1X1 276 aaPredicted RBP17.9■□□□□ 0.46
VIM-201ENST00000224237 GSTO2Q9H4Y5 243 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 COG4Q9H9E3 785 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 KCTD5Q9NXV2 234 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 VTI1BQ9UEU0 232 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 ZDHHC2Q9UIJ5 367 aa17.9■□□□□ 0.46
VIM-201ENST00000224237 APOBEC2Q9Y235 224 aaKnown RBP17.9■□□□□ 0.46
VIM-201ENST00000224237 MATN2O00339 956 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 QSOX1O00391 747 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 HDAC3O15379 428 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 MBTPS2O43462 519 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 KLK8O60259 260 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 SYNCRIPO60506 623 aaKnown RBP17.89■□□□□ 0.45
VIM-201ENST00000224237 CCDC22O60826 627 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 AP2A2O94973 939 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 ADH1BP00325 375 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 CBSLP0DN79 551 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 C6P13671 934 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 MSH3P20585 1137 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 CBSP35520 551 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 TIE1P35590 1138 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 NAA20P61599 178 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 CREB5Q02930 508 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 IER5LQ5T953 404 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 SEL1L3Q68CR1 1132 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 CACUL1Q86Y37 369 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 GPSM1Q86YR5 675 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 NUS1Q96E22 293 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 ASB2Q96Q27 587 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 LIMD1Q9UGP4 676 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 COL4A2P08572 1712 aa17.89■□□□□ 0.45
VIM-201ENST00000224237 STX16-NPEPL1H3BU86 382 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 EIF3FO00303 357 aaPredicted RBP17.88■□□□□ 0.45
VIM-201ENST00000224237 STX16O14662 325 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 IDH3AP50213 366 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 SATB1Q01826 763 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 MLLT1Q03111 559 aaPredicted RBP17.88■□□□□ 0.45
VIM-201ENST00000224237 CNTN1Q12860 1018 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 SMAD4Q13485 552 aaKnown RBP17.88■□□□□ 0.45
VIM-201ENST00000224237 CST6Q15828 149 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 UNC50Q53HI1 259 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 SH2D4BQ5SQS7 431 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 PIP5KL1Q5T9C9 394 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 EPGNQ6UW88 154 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 FRA10AC1Q70Z53 315 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 RALGPS2Q86X27 583 aaPredicted RBP17.88■□□□□ 0.45
VIM-201ENST00000224237 KCNV2Q8TDN2 545 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 CXorf40AQ8TE69 158 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 GLYATL1Q969I3 302 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 HEBP1Q9NRV9 189 aa17.88■□□□□ 0.45
VIM-201ENST00000224237 TXLNGQ9NUQ3 528 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms