RNA–Protein interactions for RNA: ENST00000610359.4

MUC1-221, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-221ENST00000610359 SIK3Q9Y2K2 1263 aa6.73□□□□□ -1.33
MUC1-221ENST00000610359 ZANQ9Y493 2812 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 C2orf72A6NCS6 295 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 PSMD11O00231 422 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 P4HA2O15460 535 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 HTRA2O43464 458 aaPredicted RBP6.72□□□□□ -1.33
MUC1-221ENST00000610359 CREB3O43889 395 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 WISP2O76076 250 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 LCA5LO95447 670 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 CLDN14O95500 239 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 VIPP01282 170 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 BRAFP15056 766 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 FOSL1P15407 271 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 AGAP20933 346 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 SCNN1AP37088 669 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 PRCPP42785 496 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 GABRB2P47870 512 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 ME1P48163 572 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 FOXL2P58012 376 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 YBEYP58557 167 aaPredicted RBP6.72□□□□□ -1.33
MUC1-221ENST00000610359 PPP2R2AP63151 447 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 TUBB4BP68371 445 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 FKBP3Q00688 224 aaKnown RBP6.72□□□□□ -1.33
MUC1-221ENST00000610359 ABRQ12979 859 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 PAK1Q13153 545 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 TUBB2AQ13885 445 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 GPR18Q14330 331 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 NCF4Q15080 339 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 C15orf59Q2T9L4 293 aaPredicted RBP6.72□□□□□ -1.33
MUC1-221ENST00000610359 PTCHD3Q3KNS1 767 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 PARP15Q460N3 678 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 TMEM198Q66K66 360 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 B3GNTL1Q67FW5 361 aaPredicted RBP6.72□□□□□ -1.33
MUC1-221ENST00000610359 FAM180AQ6UWF9 173 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 GFRALQ6UXV0 394 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 RAB43Q86YS6 212 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 UMODL1-AS1Q8N2C9 162 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 D2HGDHQ8N465 521 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 EMC1Q8N766 993 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 BCORP1Q8N888 145 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 CHDHQ8NE62 594 aaPredicted RBP6.72□□□□□ -1.33
MUC1-221ENST00000610359 CATSPER1Q8NEC5 780 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 UBXN4Q92575 508 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 AP2M1Q96CW1 435 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 CNDP1Q96KN2 507 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 FER1L6-AS2Q96M78 137 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 PCMTD1Q96MG8 357 aaPredicted RBP6.72□□□□□ -1.33
MUC1-221ENST00000610359 ZNF396Q96N95 335 aaPredicted RBP6.72□□□□□ -1.33
MUC1-221ENST00000610359 TRIM56Q9BRZ2 755 aaKnown RBP6.72□□□□□ -1.33
MUC1-221ENST00000610359 TUBB2BQ9BVA1 445 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 LRRC19Q9H756 370 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 SLC40A1Q9NP59 571 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 PCMTD2Q9NV79 361 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 TMEM51Q9NW97 253 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 P4HTMQ9NXG6 502 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 VPS18Q9P253 973 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 SLC23A2Q9UGH3 650 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 HPSEQ9Y251 543 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 PCDHGC4Q9Y5F7 938 aa6.72□□□□□ -1.33
MUC1-221ENST00000610359 GOLGA8SH3BPF8 625 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 DDX3YO15523 660 aaKnown RBP6.71□□□□□ -1.34
MUC1-221ENST00000610359 LDB2O43679 373 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 KLHL41O60662 606 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 ALOX12BO75342 701 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 CPP00450 1065 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 MST1P26927 711 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 USP8P40818 1118 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 SCNN1BP51168 640 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 CLCNKAP51800 687 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 SNX16P57768 344 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 APBA1Q02410 837 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 PTSQ03393 145 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 NSUN2Q08J23 767 aaKnown RBP eCLIP6.71□□□□□ -1.34
MUC1-221ENST00000610359 SSPNQ14714 243 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 CDO1Q16878 200 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 PLA2G4EQ3MJ16 856 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 FOXD4L6Q3SYB3 417 aaPredicted RBP6.71□□□□□ -1.34
MUC1-221ENST00000610359 CCDC14Q49A88 953 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 ZNF789Q5FWF6 425 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 ZNF385CQ66K41 422 aaPredicted RBP6.71□□□□□ -1.34
MUC1-221ENST00000610359 FCRL6Q6DN72 434 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 RPUSD3Q6P087 351 aaKnown RBP6.71□□□□□ -1.34
MUC1-221ENST00000610359 MTFR2Q6P444 385 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 FBXO38Q6PIJ6 1188 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 FOXD4L3Q6VB84 417 aaPredicted RBP6.71□□□□□ -1.34
MUC1-221ENST00000610359 MEX3BQ6ZN04 569 aaKnown RBP6.71□□□□□ -1.34
MUC1-221ENST00000610359 NCCRP1Q6ZVX7 275 aaPredicted RBP6.71□□□□□ -1.34
MUC1-221ENST00000610359 PPP1R32Q7Z5V6 425 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 SYTL1Q8IYJ3 562 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 AOPEPQ8N6M6 819 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 PAF1Q8N7H5 531 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 AVL9Q8NBF6 648 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 EXD1Q8NHP7 514 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 ADAMTS18Q8TE60 1221 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 CPT1BQ92523 772 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 NR4A3Q92570 626 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 CCDC47Q96A33 483 aaKnown RBP6.71□□□□□ -1.34
MUC1-221ENST00000610359 C18orf8Q96DM3 657 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 CLIP3Q96DZ5 547 aa6.71□□□□□ -1.34
MUC1-221ENST00000610359 ARSGQ96EG1 525 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms