RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 PRR23CQ6ZRP0 262 aa14.79□□□□□ -0.04
NUP54-213ENST00000513352 C3orf62Q6ZUJ4 267 aa14.79□□□□□ -0.04
NUP54-213ENST00000513352 MINDY1Q8N5J2 469 aa14.79□□□□□ -0.04
NUP54-213ENST00000513352 NAT14Q8WUY8 206 aa14.79□□□□□ -0.04
NUP54-213ENST00000513352 HEXDCQ8WVB3 486 aa14.79□□□□□ -0.04
NUP54-213ENST00000513352 CCDC97Q96F63 343 aaPredicted RBP14.79□□□□□ -0.04
NUP54-213ENST00000513352 SGSM3Q96HU1 749 aa14.79□□□□□ -0.04
NUP54-213ENST00000513352 OR2M4Q96R27 311 aa14.79□□□□□ -0.04
NUP54-213ENST00000513352 BOCQ9BWV1 1114 aa14.79□□□□□ -0.04
NUP54-213ENST00000513352 TCEAL2Q9H3H9 227 aaPredicted RBP14.79□□□□□ -0.04
NUP54-213ENST00000513352 ERVMER34-1Q9H9K5 563 aa14.79□□□□□ -0.04
NUP54-213ENST00000513352 IL21RQ9HBE5 538 aa14.79□□□□□ -0.04
NUP54-213ENST00000513352 NINJ2Q9NZG7 142 aa14.79□□□□□ -0.04
NUP54-213ENST00000513352 SLC17A4Q9Y2C5 497 aa14.79□□□□□ -0.04
NUP54-213ENST00000513352 PIKFYVEQ9Y2I7 2098 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 AGAP14A8MT82 685 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 GRID2O43424 1007 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 GFRA3O60609 400 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 ACSL3O95573 720 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 IVLP07476 585 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 F7P08709 466 aaPredicted RBP14.78□□□□□ -0.04
NUP54-213ENST00000513352 GSTA2P09210 222 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 FAM153BP0C7A2 387 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 MYBL2P10244 700 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 OGNP20774 298 aaKnown RBP14.78□□□□□ -0.04
NUP54-213ENST00000513352 MCM3P25205 808 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 TNFRSF8P28908 595 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 SLC1A2P43004 574 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 CCT8P50990 548 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 HK3P52790 923 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 HNRNPKP61978 463 aaKnown RBP eCLIP14.78□□□□□ -0.04
NUP54-213ENST00000513352 MGAT5Q09328 741 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 CBLBQ13191 982 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 CTBP1Q13363 440 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 C1orf61Q13536 156 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 ITIH4Q14624 930 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 NAA30Q147X3 362 aaPredicted RBP14.78□□□□□ -0.04
NUP54-213ENST00000513352 KYNUQ16719 465 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 ZNF423Q2M1K9 1284 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 FAM153CQ494X1 144 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 PRRT3Q5FWE3 981 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 LRRTM4Q86VH4 590 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 DENND6AQ8IWF6 608 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 RASGEF1AQ8N9B8 481 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 EIF1ADQ8N9N8 165 aaKnown RBP14.78□□□□□ -0.04
NUP54-213ENST00000513352 LMX1AQ8TE12 382 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 CLPBQ9H078 707 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 CDC42EP4Q9H3Q1 356 aaKnown RBP14.78□□□□□ -0.04
NUP54-213ENST00000513352 CAAP1Q9H8G2 361 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 PLAC1Q9HBJ0 212 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 FBXO6Q9NRD1 293 aaPredicted RBP14.78□□□□□ -0.04
NUP54-213ENST00000513352 ZFATQ9P243 1243 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 SLC17A6Q9P2U8 582 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 KLF15Q9UIH9 416 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 PNMA8BQ9ULN7 279 aaPredicted RBP14.78□□□□□ -0.04
NUP54-213ENST00000513352 BPTFQ12830 3046 aa14.78□□□□□ -0.04
NUP54-213ENST00000513352 NUAK1O60285 661 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 OR1I1O60431 355 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 DFNA5O60443 496 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 DNAJC6O75061 913 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 SPAG6O75602 509 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 CSF2P04141 144 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 ACP5P13686 325 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 ATP1B2P14415 290 aaPredicted RBP14.77□□□□□ -0.05
NUP54-213ENST00000513352 NME1P15531 152 aaKnown RBP14.77□□□□□ -0.05
NUP54-213ENST00000513352 ZNF7P17097 686 aaPredicted RBP14.77□□□□□ -0.05
NUP54-213ENST00000513352 STX2P32856 288 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 PHBP35232 272 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 CTSCP53634 463 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 EIF3BP55884 814 aaKnown RBP14.77□□□□□ -0.05
NUP54-213ENST00000513352 GPX6P59796 221 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 B4GALNT1Q00973 533 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 INSCQ1MX18 579 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 RNF187Q5TA31 235 aaPredicted RBP14.77□□□□□ -0.05
NUP54-213ENST00000513352 TMEM220Q6QAJ8 160 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 CCNI2Q6ZMN8 369 aaPredicted RBP14.77□□□□□ -0.05
NUP54-213ENST00000513352 CHST15Q7LFX5 561 aaPredicted RBP14.77□□□□□ -0.05
NUP54-213ENST00000513352 CILP2Q8IUL8 1156 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 LMNTD2Q8IXW0 634 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 GPR150Q8NGU9 434 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 CDKL2Q92772 493 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 SGF29Q96ES7 293 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 PARD6BQ9BYG5 372 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 RMI1Q9H9A7 625 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 LRRC4CQ9HCJ2 640 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 SPASTQ9UBP0 616 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 FAM8A1Q9UBU6 413 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 FBXO5Q9UKT4 447 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 DOLKQ9UPQ8 538 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 DGKBQ9Y6T7 804 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 CABIN1Q9Y6J0 2220 aa14.77□□□□□ -0.05
NUP54-213ENST00000513352 EP300Q09472 2414 aaPredicted RBP14.76□□□□□ -0.05
NUP54-213ENST00000513352 IGLV3-16A0A075B6K0 115 aa14.76□□□□□ -0.05
NUP54-213ENST00000513352 A0A1B0GTQ1 180 aa14.76□□□□□ -0.05
NUP54-213ENST00000513352 TCRBV9S1A1TA0A576 114 aa14.76□□□□□ -0.05
NUP54-213ENST00000513352 GPR89AB7ZAQ6 455 aa14.76□□□□□ -0.05
NUP54-213ENST00000513352 KMOO15229 486 aa14.76□□□□□ -0.05
NUP54-213ENST00000513352 YKT6O15498 198 aa14.76□□□□□ -0.05
NUP54-213ENST00000513352 FUCA1P04066 466 aa14.76□□□□□ -0.05
NUP54-213ENST00000513352 GPR89BP0CG08 455 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms