RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 SNX15Q9NRS6 342 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 C19orf12Q9NSK7 152 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 C20orf96Q9NUD7 363 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 PLCXD1Q9NUJ7 323 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 STMN3Q9NZ72 180 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 MORF4L1Q9UBU8 362 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 DCDC2Q9UHG0 476 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 ANAPC2Q9UJX6 822 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 APPL1Q9UKG1 709 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 CDH9Q9ULB4 789 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 USP18Q9UMW8 372 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 DIMT1Q9UNQ2 313 aaKnown RBP4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 KLHL20Q9Y2M5 609 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 SRPRBQ9Y5M8 271 aaKnown RBP4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 CSNK1G3Q9Y6M4 447 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 COL15A1P39059 1388 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 BCL9LQ86UU0 1499 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 NWD1Q149M9 1564 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 CEP152O94986 1710 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 SPHKAPQ2M3C7 1700 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 CPSF1Q10570 1443 aaKnown RBP4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 NRCAMQ92823 1304 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 STK36Q9NRP7 1315 aa4.72□□□□□ -1.65
HMGB3P9-201ENST00000441799 TET3O43151 1660 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 ANKRD36BQ8N2N9 1353 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 A0A0U1RQJ8 604 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 DENND3A2RUS2 1198 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 A4D1N5 150 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 PCP4L1A6NKN8 68 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 AGAP14A8MT82 685 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 ATP6V1G2-DDX39BF2Z307 99 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 AKR7A2O43488 359 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 TBC1D4O60343 1298 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 CNOT3O75175 753 aaKnown RBP4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 ULK1O75385 1050 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 ZNF821O75541 412 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 GPX5O75715 221 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 RHBDL1O75783 438 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 PDE5AO76074 875 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 RPP14O95059 124 aaKnown RBP4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 RAB3DO95716 219 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 MT-CO1P00395 513 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 APOC1P02654 83 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 LIPFP07098 398 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 IGFBP1P08833 259 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 CSH1P0DML2 217 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 CSH2P0DML3 217 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 MYBP10242 640 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 PHBP35232 272 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 HSPA9P38646 679 aaKnown RBP4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 MDH1P40925 334 aaKnown RBP4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 PIK3CBP42338 1070 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 GABRB2P47870 512 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 ID4P47928 161 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 NPY2RP49146 381 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 SERPINB9P50453 376 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 CLCNKBP51801 687 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 BCAR1P56945 870 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 RPL10AP62906 217 aaKnown RBP4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 PHC1P78364 1004 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 MAT1AQ00266 395 aaKnown RBP4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 PMP22Q01453 160 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 MC1RQ01726 317 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 PTH1RQ03431 593 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 OCA2Q04671 838 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 PPATQ06203 517 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 ZNF33AQ06730 810 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 ABHD18Q0P651 414 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 MAPK7Q13164 816 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 TRA2AQ13595 282 aaKnown RBP eCLIP4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 GCKRQ14397 625 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 PDK1Q15118 436 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 LLGL1Q15334 1064 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 PHKG1Q16816 387 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 FAM83EQ2M2I3 478 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 ZSCAN23Q3MJ62 389 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 ANKRD20A4Q4UJ75 823 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 ANKRD20A8PQ5CZ79 823 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 XKR4Q5GH76 650 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 TCP11X2Q5H9J9 407 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 ZNF484Q5JVG2 852 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 PRAMEF20Q5VT98 475 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 ARHGEF16Q5VV41 709 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 KCTD16Q68DU8 428 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 FUT10Q6P4F1 479 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 TOM1L2Q6ZVM7 507 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 ARMCX2Q7L311 632 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 BHLHA15Q7RTS1 189 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 OVCH2Q7RTZ1 564 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 DCXRQ7Z4W1 244 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 METTL23Q86XA0 190 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 HIPK1Q86Z02 1210 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 TUSC5Q8IXB3 177 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 SRRM1Q8IYB3 904 aaKnown RBP4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 KIAA2013Q8IYS2 634 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 AMER2Q8N7J2 671 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 BANPQ8N9N5 519 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 ZBTB34Q8NCN2 500 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 OR5T1Q8NG75 326 aa4.71□□□□□ -1.66
HMGB3P9-201ENST00000441799 OR7D4Q8NG98 312 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms