RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 PIWIL4Q7Z3Z4 852 aaKnown RBP21.83■■□□□ 1.09
VSX1-205ENST00000429762 SPATS2Q86XZ4 545 aaKnown RBP21.83■■□□□ 1.09
VSX1-205ENST00000429762 SLC44A3Q8N4M1 653 aa21.83■■□□□ 1.09
VSX1-205ENST00000429762 NKAPQ8N5F7 415 aaKnown RBP21.83■■□□□ 1.09
VSX1-205ENST00000429762 CCT6BQ92526 530 aa21.83■■□□□ 1.09
VSX1-205ENST00000429762 ULK4Q96C45 1275 aa21.83■■□□□ 1.09
VSX1-205ENST00000429762 COQ10AQ96MF6 247 aa21.83■■□□□ 1.09
VSX1-205ENST00000429762 SLC6A17Q9H1V8 727 aa21.83■■□□□ 1.09
VSX1-205ENST00000429762 LRRC14BA6NHZ5 514 aa21.83■■□□□ 1.08
VSX1-205ENST00000429762 WNT9AO14904 365 aa21.83■■□□□ 1.08
VSX1-205ENST00000429762 NARSO43776 548 aaKnown RBP21.83■■□□□ 1.08
VSX1-205ENST00000429762 H2AFYO75367 372 aaKnown RBP21.83■■□□□ 1.08
VSX1-205ENST00000429762 C6P13671 934 aa21.83■■□□□ 1.08
VSX1-205ENST00000429762 SMAD4Q13485 552 aaKnown RBP21.83■■□□□ 1.08
VSX1-205ENST00000429762 ENPP2Q13822 863 aa21.83■■□□□ 1.08
VSX1-205ENST00000429762 RCN2Q14257 317 aa21.83■■□□□ 1.08
VSX1-205ENST00000429762 FBXO48Q5FWF7 155 aa21.83■■□□□ 1.08
VSX1-205ENST00000429762 ARL13AQ5H913 290 aaPredicted RBP21.83■■□□□ 1.08
VSX1-205ENST00000429762 MACC1Q6ZN28 852 aa21.83■■□□□ 1.08
VSX1-205ENST00000429762 LSMEM2Q8N112 164 aa21.83■■□□□ 1.08
VSX1-205ENST00000429762 AADATQ8N5Z0 425 aa21.83■■□□□ 1.08
VSX1-205ENST00000429762 FITM2Q8N6M3 262 aa21.83■■□□□ 1.08
VSX1-205ENST00000429762 AP2M1Q96CW1 435 aa21.83■■□□□ 1.08
VSX1-205ENST00000429762 ATOH8Q96SQ7 321 aa21.83■■□□□ 1.08
VSX1-205ENST00000429762 TFB2MQ9H5Q4 396 aaKnown RBP21.83■■□□□ 1.08
VSX1-205ENST00000429762 RNF112Q9ULX5 631 aa21.83■■□□□ 1.08
VSX1-205ENST00000429762 SUPT3HB4E1H0 165 aa21.82■■□□□ 1.08
VSX1-205ENST00000429762 INPP4BO15327 924 aa21.82■■□□□ 1.08
VSX1-205ENST00000429762 SUPT3HO75486 399 aa21.82■■□□□ 1.08
VSX1-205ENST00000429762 CD9P21926 228 aa21.82■■□□□ 1.08
VSX1-205ENST00000429762 DRD3P35462 400 aa21.82■■□□□ 1.08
VSX1-205ENST00000429762 NSG1P42857 185 aa21.82■■□□□ 1.08
VSX1-205ENST00000429762 PRKAA2P54646 552 aa21.82■■□□□ 1.08
VSX1-205ENST00000429762 SATB1Q01826 763 aa21.82■■□□□ 1.08
VSX1-205ENST00000429762 ZNF284Q2VY69 593 aa21.82■■□□□ 1.08
VSX1-205ENST00000429762 UGT3A1Q6NUS8 523 aa21.82■■□□□ 1.08
VSX1-205ENST00000429762 CCDC121Q6ZUS5 278 aa21.82■■□□□ 1.08
VSX1-205ENST00000429762 MAVSQ7Z434 540 aa21.82■■□□□ 1.08
VSX1-205ENST00000429762 TRAM1L1Q8N609 369 aa21.82■■□□□ 1.08
VSX1-205ENST00000429762 KIAA1191Q96A73 305 aa21.82■■□□□ 1.08
VSX1-205ENST00000429762 DRC3Q9H069 523 aa21.82■■□□□ 1.08
VSX1-205ENST00000429762 SERGEFQ9UGK8 458 aa21.82■■□□□ 1.08
VSX1-205ENST00000429762 A0A1W2PPC1 479 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 NCF1BA6NI72 391 aaPredicted RBP21.81■■□□□ 1.08
VSX1-205ENST00000429762 NCF1CA8MVU1 366 aaPredicted RBP21.81■■□□□ 1.08
VSX1-205ENST00000429762 F8W8V4 182 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 SYNCRIPO60506 623 aaKnown RBP21.81■■□□□ 1.08
VSX1-205ENST00000429762 IPO13O94829 963 aaKnown RBP21.81■■□□□ 1.08
VSX1-205ENST00000429762 KIAA0754O94854 1291 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 NCF1P14598 390 aaPredicted RBP21.81■■□□□ 1.08
VSX1-205ENST00000429762 SKIV2L2P42285 1042 aaKnown RBP21.81■■□□□ 1.08
VSX1-205ENST00000429762 ELP6Q0PNE2 266 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 CST6Q15828 149 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 ACSBG2Q5FVE4 666 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 PIP5KL1Q5T9C9 394 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 PTGR2Q8N8N7 351 aaPredicted RBP21.81■■□□□ 1.08
VSX1-205ENST00000429762 PIWIL2Q8TC59 973 aaKnown RBP21.81■■□□□ 1.08
VSX1-205ENST00000429762 INPP5DQ92835 1189 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 DTD2Q96FN9 168 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 EBF4Q9BQW3 602 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 F5P12259 2224 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 IGLV3-16A0A075B6K0 115 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 K7ESM1 405 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 SMIM24O75264 130 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 RECQL5O94762 991 aaPredicted RBP21.81■■□□□ 1.08
VSX1-205ENST00000429762 UBOX5O94941 541 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 MTHFD2P13995 350 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 TSPAN8P19075 237 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 DNAJB13P59910 316 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 ATP6V0D1P61421 351 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 CAMK2GQ13555 558 aaPredicted RBP21.81■■□□□ 1.08
VSX1-205ENST00000429762 TMEM196Q5HYL7 178 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 CFAP157Q5JU67 520 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 ZBTB2Q8N680 514 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 PRR11Q96HE9 360 aaPredicted RBP21.81■■□□□ 1.08
VSX1-205ENST00000429762 MYLK2Q9H1R3 596 aa21.81■■□□□ 1.08
VSX1-205ENST00000429762 RSPH9Q9H1X1 276 aaPredicted RBP21.81■■□□□ 1.08
VSX1-205ENST00000429762 ANKRD12Q6UB98 2062 aa21.8■■□□□ 1.08
VSX1-205ENST00000429762 LZTS3O60299 673 aaPredicted RBP21.8■■□□□ 1.08
VSX1-205ENST00000429762 KERAO60938 352 aa21.8■■□□□ 1.08
VSX1-205ENST00000429762 SIX3O95343 332 aaPredicted RBP21.8■■□□□ 1.08
VSX1-205ENST00000429762 KLF8O95600 359 aaPredicted RBP21.8■■□□□ 1.08
VSX1-205ENST00000429762 COL9A1P20849 921 aa21.8■■□□□ 1.08
VSX1-205ENST00000429762 PFKFB4Q16877 469 aa21.8■■□□□ 1.08
VSX1-205ENST00000429762 VWA5B1Q5TIE3 1220 aa21.8■■□□□ 1.08
VSX1-205ENST00000429762 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.8■■□□□ 1.08
VSX1-205ENST00000429762 TRIM74Q86UV6 250 aa21.8■■□□□ 1.08
VSX1-205ENST00000429762 ALYREFQ86V81 257 aaKnown RBP21.8■■□□□ 1.08
VSX1-205ENST00000429762 FUBP1Q96AE4 644 aaKnown RBP21.8■■□□□ 1.08
VSX1-205ENST00000429762 NUS1Q96E22 293 aa21.8■■□□□ 1.08
VSX1-205ENST00000429762 DCUN1D1Q96GG9 259 aa21.8■■□□□ 1.08
VSX1-205ENST00000429762 ZSCAN5AQ9BUG6 496 aa21.8■■□□□ 1.08
VSX1-205ENST00000429762 HDAC8Q9BY41 377 aa21.8■■□□□ 1.08
VSX1-205ENST00000429762 SMOXQ9NWM0 555 aa21.8■■□□□ 1.08
VSX1-205ENST00000429762 HEY2Q9UBP5 337 aa21.8■■□□□ 1.08
VSX1-205ENST00000429762 FADS3Q9Y5Q0 445 aa21.8■■□□□ 1.08
VSX1-205ENST00000429762 A0A1W2PP55 124 aa21.79■■□□□ 1.08
VSX1-205ENST00000429762 ADAM23O75077 832 aa21.79■■□□□ 1.08
VSX1-205ENST00000429762 FAM46CQ5VWP2 391 aa21.79■■□□□ 1.08
VSX1-205ENST00000429762 BEND7Q8N7W2 519 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms