RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 CEBPBP17676 345 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 PTPN1P18031 435 aaKnown RBP4.57□□□□□ -1.68
SF3B1-202ENST00000409915 ATF6P18850 670 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 GNAZP19086 355 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 WARSP23381 471 aaKnown RBP4.57□□□□□ -1.68
SF3B1-202ENST00000409915 CYP2F1P24903 491 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 GNL1P36915 607 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-202ENST00000409915 PPARGP37231 505 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-202ENST00000409915 CCR2P41597 374 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 MTHFRP42898 656 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 ACADSBP45954 432 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 FMO5P49326 533 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 GALK1P51570 392 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 NDST1P52848 882 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 AP3M2P53677 418 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 CACNA2D1P54289 1103 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 MTTPP55157 894 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 SLC6A3Q01959 620 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 CYP27A1Q02318 531 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 TLE1Q04724 770 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 ITIH3Q06033 890 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 KLC1Q07866 573 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 GPR17Q13304 367 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 PLD1Q13393 1074 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 MSLNQ13421 630 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-202ENST00000409915 CAMK2DQ13557 499 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 TDGQ13569 410 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 RAB32Q13637 225 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 LASP1Q14847 261 aaKnown RBP4.57□□□□□ -1.68
SF3B1-202ENST00000409915 RAB39AQ14964 217 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 RPS6KA2Q15349 733 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 ALG11Q2TAA5 492 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 PRICKLE4Q2TBC4 344 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 MAJINQ3KP22 176 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 MGAT5BQ3V5L5 792 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 KRBOX4Q5JUW0 171 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 ANKRD20A2Q5SQ80 823 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 PLEKHS1Q5SXH7 462 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 ANKRD20A1Q5TYW2 823 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 ANKRD20A3Q5VUR7 823 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 BTBD8Q5XKL5 378 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 RAP1GAP2Q684P5 730 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 TPGS2Q68CL5 300 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 CES5AQ6NT32 575 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 FIP1L1Q6UN15 594 aaKnown RBP4.57□□□□□ -1.68
SF3B1-202ENST00000409915 DBX2Q6ZNG2 339 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 GAREM2Q75VX8 874 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 KANSL1Q7Z3B3 1105 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 LIMS2Q7Z4I7 341 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 FRMD5Q7Z6J6 570 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 IRF2BP1Q8IU81 584 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 ADHFE1Q8IWW8 467 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 DMRTC2Q8IXT2 367 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-202ENST00000409915 THEM5Q8N1Q8 247 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 TMEM86AQ8N2M4 240 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 RNF10Q8N5U6 811 aaKnown RBP4.57□□□□□ -1.68
SF3B1-202ENST00000409915 DPP10Q8N608 796 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 FRMD1Q8N878 549 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 POGLUT1Q8NBL1 392 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 GALNT11Q8NCW6 608 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 HIPK4Q8NE63 616 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 FBXL13Q8NEE6 735 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 CMASQ8NFW8 434 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-202ENST00000409915 OR56A3Q8NH54 315 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 AGAP11Q8TF27 550 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 GAB3Q8WWW8 586 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 FAM162AQ96A26 154 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 TCEAL4Q96EI5 215 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 MYADMQ96S97 322 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 ABHD1Q96SE0 405 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 PKMYT1Q99640 499 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 CCT7Q99832 543 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 SPXQ9BT56 116 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 PHF7Q9BWX1 381 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-202ENST00000409915 IMPG2Q9BZV3 1241 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 KLHL4Q9C0H6 718 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 SNX25Q9H3E2 840 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 CENPHQ9H3R5 247 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 SMOC2Q9H3U7 446 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 VPS37BQ9H9H4 285 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 ZNF304Q9HCX3 659 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 ZNF334Q9HCZ1 680 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-202ENST00000409915 SAMSN1Q9NSI8 373 aaKnown RBP4.57□□□□□ -1.68
SF3B1-202ENST00000409915 FAM49BQ9NUQ9 324 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 TMEM30AQ9NV96 361 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 FKBP14Q9NWM8 211 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 RAB20Q9NX57 234 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 ZDHHC7Q9NXF8 308 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 ACTR3BQ9P1U1 418 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 DNMT3BQ9UBC3 853 aaKnown RBP4.57□□□□□ -1.68
SF3B1-202ENST00000409915 MID2Q9UJV3 735 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 AJAP1Q9UKB5 411 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-202ENST00000409915 COA3Q9Y2R0 106 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-202ENST00000409915 MED16Q9Y2X0 877 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 FAM32AQ9Y421 112 aaKnown RBP4.57□□□□□ -1.68
SF3B1-202ENST00000409915 POMT1Q9Y6A1 747 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 CUL9Q8IWT3 2517 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 BDP1A6H8Y1 2624 aa4.57□□□□□ -1.68
SF3B1-202ENST00000409915 DENND4AQ7Z401 1863 aa4.56□□□□□ -1.68
SF3B1-202ENST00000409915 TRAV34A0A0B4J273 112 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms