RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 TRIM54Q9BYV2 358 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 BFARQ9NZS9 450 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 NUP50Q9UKX7 468 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 UBIAD1Q9Y5Z9 338 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 MIA3Q5JRA6 1907 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 PCP4L1A6NKN8 68 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 A8MT66 165 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 ATP6V1G2-DDX39BF2Z307 99 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 TFECO14948 347 aaPredicted RBP12.69□□□□□ -0.38
HERC3-203ENST00000407637 HS6ST1O60243 411 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 MED26O95402 600 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 DNTTP04053 509 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 LCKP06239 509 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 PGK2P07205 417 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 ICAM2P13598 275 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 WEE1P30291 646 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 HCAR3P49019 387 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 DNAJB13P59910 316 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 CD83Q01151 205 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 RAPSNQ13702 412 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 GRB7Q14451 532 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 SYT16Q17RD7 645 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 LAIR1Q6GTX8 287 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 STYK1Q6J9G0 422 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 FAM122CQ6P4D5 195 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 RAB43Q86YS6 212 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 BRSK2Q8IWQ3 736 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 MCPH1Q8NEM0 835 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 PPP1R13LQ8WUF5 828 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 LPAR1Q92633 364 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 TMEM143Q96AN5 459 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 NECTIN4Q96NY8 510 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 KCTD15Q96SI1 283 aaPredicted RBP12.69□□□□□ -0.38
HERC3-203ENST00000407637 TBCBQ99426 244 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 SDHCQ99643 169 aaPredicted RBP12.69□□□□□ -0.38
HERC3-203ENST00000407637 MRPL57Q9BQC6 102 aaKnown RBP12.69□□□□□ -0.38
HERC3-203ENST00000407637 XYLT2Q9H1B5 865 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 AS3MTQ9HBK9 375 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 ERVK13-1Q9NX77 482 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 ZMAT5Q9UDW3 170 aaKnown RBP12.69□□□□□ -0.38
HERC3-203ENST00000407637 TEKT2Q9UIF3 430 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 GRIP1Q9Y3R0 1128 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 RIPK3Q9Y572 518 aa12.69□□□□□ -0.38
HERC3-203ENST00000407637 COL14A1Q05707 1796 aaKnown RBP12.69□□□□□ -0.38
HERC3-203ENST00000407637 SIP14410 1827 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 HMX3A6NHT5 357 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 DSCR3O14972 297 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 OR7A10O76100 309 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 CNTN5O94779 1100 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 PSKH1P11801 424 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 TPH1P17752 444 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 NMBRP28336 390 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 SDC4P31431 198 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 RAB10P61026 200 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 PTPN11Q06124 597 aaPredicted RBP12.68□□□□□ -0.38
HERC3-203ENST00000407637 SLFN12LQ6IEE8 588 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 SULT1C3Q6IMI6 304 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 DENND5AQ6IQ26 1287 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 SPESP1Q6UW49 350 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 DPY19L3Q6ZPD9 716 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 SH3BP5LQ7L8J4 393 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 RNF135Q8IUD6 432 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 PJA1Q8NG27 643 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 FRS2Q8WU20 508 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 CDADC1Q9BWV3 514 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 UCK2Q9BZX2 261 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 ELOVL4Q9GZR5 314 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 ACOT13Q9NPJ3 140 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 SLAMF8Q9P0V8 285 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 NUFIP1Q9UHK0 495 aaKnown RBP12.68□□□□□ -0.38
HERC3-203ENST00000407637 VPS4AQ9UN37 437 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 IPPQ9Y573 584 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 MICAL3Q7RTP6 2002 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 TEX51A0A1B0GUA7 166 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 MEIOCA2RUB1 952 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 BCKDKO14874 412 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 DGAT1O75907 488 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 GOT1P17174 413 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 PRKACGP22612 351 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 SLC15A1P46059 708 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 SLC35A2P78381 396 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 FOXM1Q08050 763 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 GPAT3Q53EU6 434 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 APOBEC3HQ6NTF7 200 aaKnown RBP12.68□□□□□ -0.38
HERC3-203ENST00000407637 SYCE2Q6PIF2 218 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 SLC26A9Q7LBE3 791 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 RIOX2Q8IUF8 465 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 DCP1BQ8IZD4 617 aaKnown RBP12.68□□□□□ -0.38
HERC3-203ENST00000407637 CCNYQ8ND76 341 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 SLC7A6Q92536 515 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 ZNF566Q969W8 418 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 CDCA5Q96FF9 252 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 CARS2Q9HA77 564 aaKnown RBP12.68□□□□□ -0.38
HERC3-203ENST00000407637 POLLQ9UGP5 575 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 AGO1Q9UL18 857 aaKnown RBP12.68□□□□□ -0.38
HERC3-203ENST00000407637 LY75O60449 1722 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 AHDC1Q5TGY3 1603 aaPredicted RBP12.68□□□□□ -0.38
HERC3-203ENST00000407637 STRCQ7RTU9 1775 aa12.68□□□□□ -0.38
HERC3-203ENST00000407637 FAM95CA0A1B0GW59 222 aa12.67□□□□□ -0.38
HERC3-203ENST00000407637 ASPDHA6ND91 283 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms