RNA–Protein interactions for RNA: ENST00000404249.7

CDK11A-208, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK11A, Length 2,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-208ENST00000404249 LINGO1Q96FE5 620 aa17.62■□□□□ 0.41
CDK11A-208ENST00000404249 TMEM74Q96NL1 305 aa17.62■□□□□ 0.41
CDK11A-208ENST00000404249 ACOX2Q99424 681 aa17.62■□□□□ 0.41
CDK11A-208ENST00000404249 MUC3BQ9H195 1237 aa17.62■□□□□ 0.41
CDK11A-208ENST00000404249 SCUBE2Q9NQ36 999 aa17.62■□□□□ 0.41
CDK11A-208ENST00000404249 SUN2Q9UH99 717 aa17.62■□□□□ 0.41
CDK11A-208ENST00000404249 FKBPLQ9UIM3 349 aa17.62■□□□□ 0.41
CDK11A-208ENST00000404249 ZFP37Q9Y6Q3 630 aaPredicted RBP17.62■□□□□ 0.41
CDK11A-208ENST00000404249 OR1I1O60431 355 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 ACSL4O60488 711 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 CES1P23141 567 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 PSMA3P25788 255 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 SOX11P35716 441 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 CRHR2Q13324 411 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 CTSL3PQ5NE16 218 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 CCSAPQ6IQ19 270 aaPredicted RBP17.61■□□□□ 0.41
CDK11A-208ENST00000404249 CD200R1Q8TD46 325 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 ESAMQ96AP7 390 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 FBXL20Q96IG2 436 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 SPATA17Q96L03 361 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 RPL10LQ96L21 214 aaKnown RBP17.61■□□□□ 0.41
CDK11A-208ENST00000404249 PFDN4Q9NQP4 134 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 RIC8BQ9NVN3 520 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 ZIM2Q9NZV7 527 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 ARIH1Q9Y4X5 557 aaPredicted RBP17.61■□□□□ 0.41
CDK11A-208ENST00000404249 ASB1Q9Y576 335 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 SEC24DO94855 1032 aaPredicted RBP17.61■□□□□ 0.41
CDK11A-208ENST00000404249 OR4F21O95013 312 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 VNN2O95498 520 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 ZDHHC11BP0C7U3 371 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 UMPSP11172 480 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 CR2P20023 1033 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 LPOP22079 712 aaPredicted RBP17.61■□□□□ 0.41
CDK11A-208ENST00000404249 IL12AP29459 219 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 MC4RP32245 332 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 ESRRGP62508 458 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 AASDHQ4L235 1098 aaPredicted RBP17.61■□□□□ 0.41
CDK11A-208ENST00000404249 RNF19BQ6ZMZ0 732 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 GPSM1Q86YR5 675 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 PAPD5Q8NDF8 572 aaKnown RBP17.61■□□□□ 0.41
CDK11A-208ENST00000404249 EEF1AKMT1Q8WVE0 214 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 ARHGAP39Q9C0H5 1083 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 CD320Q9NPF0 282 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 INTS7Q9NVH2 962 aaKnown RBP17.61■□□□□ 0.41
CDK11A-208ENST00000404249 CD274Q9NZQ7 290 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 SLAMF8Q9P0V8 285 aa17.61■□□□□ 0.41
CDK11A-208ENST00000404249 KANSL1LA0AUZ9 987 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 FAM234BA2RU67 622 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 TRIM64A6NGJ6 449 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 E2F3O00716 465 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 KDELR3O43731 214 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 TTPAP49638 278 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 CDH4P55283 916 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 IL2P60568 153 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 DCTN2Q13561 401 aaKnown RBP17.6■□□□□ 0.41
CDK11A-208ENST00000404249 NANOGP8Q6NSW7 305 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 TBC1D21Q8IYX1 336 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 FNDC5Q8NAU1 212 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 GIPC2Q8TF65 315 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 GPR62Q9BZJ7 368 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 NANOGQ9H9S0 305 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 SMPD3Q9NY59 655 aaPredicted RBP17.6■□□□□ 0.41
CDK11A-208ENST00000404249 USP22Q9UPT9 525 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 H3BNC9 293 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 CLOCKO15516 846 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 SYNCRIPO60506 623 aaKnown RBP17.6■□□□□ 0.41
CDK11A-208ENST00000404249 CLIC3O95833 236 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 CKBP12277 381 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 RPS24P62847 133 aaKnown RBP17.6■□□□□ 0.41
CDK11A-208ENST00000404249 C6orf136Q5SQH8 315 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 CLVS1Q8IUQ0 354 aaPredicted RBP17.6■□□□□ 0.41
CDK11A-208ENST00000404249 CPNE9Q8IYJ1 553 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 CDYL2Q8N8U2 506 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 DCBLD1Q8N8Z6 715 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 PLEKHG4BQ96PX9 1271 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 ZNF382Q96SR6 550 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 COMMD8Q9NX08 183 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 FNDC3AQ9Y2H6 1198 aaKnown RBP17.6■□□□□ 0.41
CDK11A-208ENST00000404249 FADS3Q9Y5Q0 445 aa17.6■□□□□ 0.41
CDK11A-208ENST00000404249 PFDN6O15212 129 aa17.59■□□□□ 0.41
CDK11A-208ENST00000404249 ENO2P09104 434 aaPredicted RBP17.59■□□□□ 0.41
CDK11A-208ENST00000404249 HRH2P25021 359 aa17.59■□□□□ 0.41
CDK11A-208ENST00000404249 HTR1EP28566 365 aa17.59■□□□□ 0.41
CDK11A-208ENST00000404249 CAPGP40121 348 aa17.59■□□□□ 0.41
CDK11A-208ENST00000404249 FAM189BP81408 668 aa17.59■□□□□ 0.41
CDK11A-208ENST00000404249 MBTPS1Q14703 1052 aa17.59■□□□□ 0.41
CDK11A-208ENST00000404249 ZBED5Q49AG3 693 aa17.59■□□□□ 0.41
CDK11A-208ENST00000404249 ZRANB3Q5FWF4 1079 aa17.59■□□□□ 0.41
CDK11A-208ENST00000404249 ZFAND4Q86XD8 727 aa17.59■□□□□ 0.41
CDK11A-208ENST00000404249 ADAMTS16Q8TE57 1224 aa17.59■□□□□ 0.41
CDK11A-208ENST00000404249 PHF12Q96QT6 1004 aa17.59■□□□□ 0.41
CDK11A-208ENST00000404249 RPF2Q9H7B2 306 aaKnown RBP17.59■□□□□ 0.41
CDK11A-208ENST00000404249 AGO1Q9UL18 857 aaKnown RBP17.59■□□□□ 0.41
CDK11A-208ENST00000404249 LDLRP01130 860 aa17.59■□□□□ 0.41
CDK11A-208ENST00000404249 CD9P21926 228 aa17.59■□□□□ 0.41
CDK11A-208ENST00000404249 VARSP26640 1264 aaKnown RBP17.59■□□□□ 0.41
CDK11A-208ENST00000404249 CCND3P30281 292 aaPredicted RBP17.59■□□□□ 0.41
CDK11A-208ENST00000404249 RPS9P46781 194 aaKnown RBP17.59■□□□□ 0.41
CDK11A-208ENST00000404249 EMX2Q04743 252 aa17.59■□□□□ 0.41
CDK11A-208ENST00000404249 GPR17Q13304 367 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms