RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 SPIBQ01892 262 aa8.33□□□□□ -1.08
VPS36-201ENST00000378060 RFTN2Q52LD8 501 aaPredicted RBP8.33□□□□□ -1.08
VPS36-201ENST00000378060 ZDHHC20Q5W0Z9 365 aa8.33□□□□□ -1.08
VPS36-201ENST00000378060 CYP20A1Q6UW02 462 aa8.33□□□□□ -1.08
VPS36-201ENST00000378060 KRT74Q7RTS7 529 aa8.33□□□□□ -1.08
VPS36-201ENST00000378060 OR52L1Q8NGH7 329 aa8.33□□□□□ -1.08
VPS36-201ENST00000378060 ZNF671Q8TAW3 534 aa8.33□□□□□ -1.08
VPS36-201ENST00000378060 TM6SF2Q9BZW4 377 aa8.33□□□□□ -1.08
VPS36-201ENST00000378060 SUCOQ9UBS9 1254 aaKnown RBP8.33□□□□□ -1.08
VPS36-201ENST00000378060 FBXW11Q9UKB1 542 aa8.33□□□□□ -1.08
VPS36-201ENST00000378060 PDE10AQ9Y233 779 aa8.33□□□□□ -1.08
VPS36-201ENST00000378060 SLC9A3R1O14745 358 aaPredicted RBP8.32□□□□□ -1.08
VPS36-201ENST00000378060 SH3BGRLO75368 114 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 ASLP04424 464 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 PRPS2P11908 318 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 HDCP19113 662 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 PRKCHP24723 683 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 GUCA1AP43080 201 aaPredicted RBP8.32□□□□□ -1.08
VPS36-201ENST00000378060 NDST2P52849 883 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 GPX6P59796 221 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 DLG1Q12959 904 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 RHBDF2Q6PJF5 856 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 TMEM110Q86TL2 294 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 FCRL5Q96RD9 977 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 TUBGCP5Q96RT8 1024 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 NKX1-2Q9UD57 310 aaPredicted RBP8.32□□□□□ -1.08
VPS36-201ENST00000378060 TDRKHQ9Y2W6 561 aaKnown RBP8.32□□□□□ -1.08
VPS36-201ENST00000378060 GOLGA4Q13439 2230 aaKnown RBP8.32□□□□□ -1.08
VPS36-201ENST00000378060 UNCXA6NJT0 531 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 E9PAM4 449 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 UBXN8O00124 270 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 GABRDO14764 452 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 OR10H3O60404 316 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 PCDH8O95206 1070 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 MED22Q15528 200 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 CPTPQ5TA50 214 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 CLEC6AQ6EIG7 209 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 CXCL17Q6UXB2 119 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 ATG14Q6ZNE5 492 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 PTCHD4Q6ZW05 846 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 CDH24Q86UP0 819 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 P2RY8Q86VZ1 359 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 TMEM126BQ8IUX1 230 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 DENND1CQ8IV53 801 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 ZZZ3Q8IYH5 903 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 CSGALNACT1Q8TDX6 532 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 TSSK3Q96PN8 268 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 GPR21Q99679 349 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 TMPRSS4Q9NRS4 437 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 WRAP73Q9P2S5 460 aaPredicted RBP8.32□□□□□ -1.08
VPS36-201ENST00000378060 ZNF490Q9ULM2 529 aaPredicted RBP8.32□□□□□ -1.08
VPS36-201ENST00000378060 TIMM22Q9Y584 194 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 LOC110117498-PIK3R3F6TDL0 507 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 MSCO60682 206 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 OR6B1O95007 311 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 FAM163BP0C2L3 166 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 NR2F1P10589 423 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 IL1R2P27930 398 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 HCAR3P49019 387 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 EEFSECP57772 596 aaKnown RBP8.32□□□□□ -1.08
VPS36-201ENST00000378060 LILRA4P59901 499 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 MAP2K5Q13163 448 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 NOGQ13253 232 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 NDUFAF6Q330K2 333 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 ALFQ53S48 1182 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 BICRALQ6AI39 1079 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 FBXL19Q6PCT2 694 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 PLET1Q6UQ28 207 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 ZBTB46Q86UZ6 589 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 RALGPS2Q86X27 583 aaPredicted RBP8.32□□□□□ -1.08
VPS36-201ENST00000378060 PYROXD2Q8N2H3 581 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 LRRC17Q8N6Y2 441 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 SPATA22Q8NHS9 363 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 EXOC2Q96KP1 924 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 ZNF570Q96NI8 536 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 SMAD5Q99717 465 aaKnown RBP8.32□□□□□ -1.08
VPS36-201ENST00000378060 CCDC3Q9BQI4 270 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 ACBD6Q9BR61 282 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 BCAS3Q9H6U6 928 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 PTGFRNQ9P2B2 879 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 PTBP2Q9UKA9 531 aaKnown RBP8.32□□□□□ -1.08
VPS36-201ENST00000378060 ING4Q9UNL4 249 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 GTF2A1LQ9UNN4 478 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 U3KQV3 271 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 A0A1W2PQ67 120 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 FAM149AA5PLN7 773 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 STK25O00506 426 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 RAP2AP10114 183 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 PRKAR1AP10644 381 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 EPORP19235 508 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 PTX3P26022 381 aaPredicted RBP8.32□□□□□ -1.08
VPS36-201ENST00000378060 WEE1P30291 646 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 HOXD13P35453 343 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 CTSKP43235 329 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 MAPKAPK2P49137 400 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 CCT3P49368 545 aaKnown RBP8.32□□□□□ -1.08
VPS36-201ENST00000378060 PFKPQ01813 784 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 SGCGQ13326 291 aa8.32□□□□□ -1.08
VPS36-201ENST00000378060 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.32□□□□□ -1.08
VPS36-201ENST00000378060 RTL3Q8N8U3 475 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms