RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 ERVK-9P63128 1117 aa10.77□□□□□ -0.68
RTTN-217ENST00000640393 SIRT1Q96EB6 747 aa10.77□□□□□ -0.68
RTTN-217ENST00000640393 LZTS3O60299 673 aaPredicted RBP10.77□□□□□ -0.69
RTTN-217ENST00000640393 STAU1O95793 577 aaKnown RBP10.77□□□□□ -0.69
RTTN-217ENST00000640393 RASA1P20936 1047 aa10.77□□□□□ -0.69
RTTN-217ENST00000640393 RELBQ01201 579 aa10.77□□□□□ -0.69
RTTN-217ENST00000640393 PSME1Q06323 249 aa10.77□□□□□ -0.69
RTTN-217ENST00000640393 PLEKHM2Q8IWE5 1019 aa10.77□□□□□ -0.69
RTTN-217ENST00000640393 GTF2IP78347 998 aa10.76□□□□□ -0.69
RTTN-217ENST00000640393 LAPTM4AQ15012 233 aa10.76□□□□□ -0.69
RTTN-217ENST00000640393 KANK4Q5T7N3 995 aaPredicted RBP10.76□□□□□ -0.69
RTTN-217ENST00000640393 OSBPL3Q9H4L5 887 aa10.76□□□□□ -0.69
RTTN-217ENST00000640393 ZNF395Q9H8N7 513 aaPredicted RBP10.76□□□□□ -0.69
RTTN-217ENST00000640393 OGFOD1Q8N543 542 aa10.75□□□□□ -0.69
RTTN-217ENST00000640393 ZNF594Q96JF6 807 aaPredicted RBP10.75□□□□□ -0.69
RTTN-217ENST00000640393 ATP5J2-PTCD1G3V325 749 aa10.74□□□□□ -0.69
RTTN-217ENST00000640393 AXIN1O15169 862 aa10.74□□□□□ -0.69
RTTN-217ENST00000640393 ST8SIA5O15466 376 aa10.74□□□□□ -0.69
RTTN-217ENST00000640393 LARP1Q6PKG0 1096 aaKnown RBP10.74□□□□□ -0.69
RTTN-217ENST00000640393 Q6ZNB5 142 aa10.74□□□□□ -0.69
RTTN-217ENST00000640393 TRIM52Q96A61 297 aa10.74□□□□□ -0.69
RTTN-217ENST00000640393 RAB6BQ9NRW1 208 aa10.74□□□□□ -0.69
RTTN-217ENST00000640393 ACIN1Q9UKV3 1341 aaKnown RBP10.73□□□□□ -0.69
RTTN-217ENST00000640393 CLDN10P78369 228 aa10.73□□□□□ -0.69
RTTN-217ENST00000640393 C6orf118Q5T5N4 469 aa10.73□□□□□ -0.69
RTTN-217ENST00000640393 PBXIP1Q96AQ6 731 aa10.73□□□□□ -0.69
RTTN-217ENST00000640393 DNAAF2Q9NVR5 837 aaKnown RBP10.73□□□□□ -0.69
RTTN-217ENST00000640393 PCDHGA11Q9Y5H2 935 aa10.73□□□□□ -0.69
RTTN-217ENST00000640393 AVPP01185 164 aa10.72□□□□□ -0.69
RTTN-217ENST00000640393 BMP1P13497 986 aa10.72□□□□□ -0.69
RTTN-217ENST00000640393 TRIM50Q86XT4 487 aa10.72□□□□□ -0.69
RTTN-217ENST00000640393 ZBTB7BO15156 539 aaPredicted RBP10.71□□□□□ -0.69
RTTN-217ENST00000640393 ADH1AP07327 375 aa10.71□□□□□ -0.69
RTTN-217ENST00000640393 CRTC2Q53ET0 693 aaPredicted RBP10.71□□□□□ -0.69
RTTN-217ENST00000640393 Q6ZVU0 165 aa10.71□□□□□ -0.69
RTTN-217ENST00000640393 CYP2U1Q7Z449 544 aa10.71□□□□□ -0.69
RTTN-217ENST00000640393 MEN1O00255 615 aa10.7□□□□□ -0.7
RTTN-217ENST00000640393 ATP1A2P50993 1020 aa10.7□□□□□ -0.7
RTTN-217ENST00000640393 SRPK2P78362 688 aaKnown RBP10.7□□□□□ -0.7
RTTN-217ENST00000640393 ARHGEF10LQ9HCE6 1279 aa10.7□□□□□ -0.7
RTTN-217ENST00000640393 DACH1Q9UI36 760 aa10.7□□□□□ -0.7
RTTN-217ENST00000640393 KIAA1024Q9UPX6 916 aa10.7□□□□□ -0.7
RTTN-217ENST00000640393 UPP2O95045 317 aa10.69□□□□□ -0.7
RTTN-217ENST00000640393 BMP2P12643 396 aa10.69□□□□□ -0.7
RTTN-217ENST00000640393 CCDC102BQ68D86 513 aa10.69□□□□□ -0.7
RTTN-217ENST00000640393 TPCN2Q8NHX9 752 aa10.69□□□□□ -0.7
RTTN-217ENST00000640393 SERTAD1Q9UHV2 236 aa10.69□□□□□ -0.7
RTTN-217ENST00000640393 LGR5O75473 907 aa10.68□□□□□ -0.7
RTTN-217ENST00000640393 PTGIRP43119 386 aa10.68□□□□□ -0.7
RTTN-217ENST00000640393 KDF1Q8NAX2 398 aaPredicted RBP10.68□□□□□ -0.7
RTTN-217ENST00000640393 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.68□□□□□ -0.7
RTTN-217ENST00000640393 PURBQ96QR8 312 aaKnown RBP10.68□□□□□ -0.7
RTTN-217ENST00000640393 AAASQ9NRG9 546 aa10.68□□□□□ -0.7
RTTN-217ENST00000640393 RBM19Q9Y4C8 960 aaKnown RBP10.68□□□□□ -0.7
RTTN-217ENST00000640393 A0A1W2PRU2 124 aa10.67□□□□□ -0.7
RTTN-217ENST00000640393 USP17L15C9J2P7 530 aa10.67□□□□□ -0.7
RTTN-217ENST00000640393 USP17L10C9JJH3 530 aa10.67□□□□□ -0.7
RTTN-217ENST00000640393 USP17L13C9JLJ4 530 aa10.67□□□□□ -0.7
RTTN-217ENST00000640393 USP17L12C9JPN9 530 aa10.67□□□□□ -0.7
RTTN-217ENST00000640393 USP17L11C9JVI0 530 aa10.67□□□□□ -0.7
RTTN-217ENST00000640393 USP17L21D6R901 530 aa10.67□□□□□ -0.7
RTTN-217ENST00000640393 USP17L18D6R9N7 530 aa10.67□□□□□ -0.7
RTTN-217ENST00000640393 USP17L22D6RA61 530 aa10.67□□□□□ -0.7
RTTN-217ENST00000640393 USP17L17D6RBQ6 530 aa10.67□□□□□ -0.7
RTTN-217ENST00000640393 USP17L19D6RCP7 530 aa10.67□□□□□ -0.7
RTTN-217ENST00000640393 USP17L20D6RJB6 530 aa10.67□□□□□ -0.7
RTTN-217ENST00000640393 USP17L24Q0WX57 530 aa10.67□□□□□ -0.7
RTTN-217ENST00000640393 CTC1Q2NKJ3 1217 aa10.67□□□□□ -0.7
RTTN-217ENST00000640393 MRPL14Q6P1L8 145 aaKnown RBP10.67□□□□□ -0.7
RTTN-217ENST00000640393 MEIOBQ8N635 442 aa10.67□□□□□ -0.7
RTTN-217ENST00000640393 SFI1A8K8P3 1242 aa10.66□□□□□ -0.7
RTTN-217ENST00000640393 GDF10P55107 478 aa10.66□□□□□ -0.7
RTTN-217ENST00000640393 DPYDQ12882 1025 aa10.66□□□□□ -0.7
RTTN-217ENST00000640393 PTK7Q13308 1070 aa10.66□□□□□ -0.7
RTTN-217ENST00000640393 LINC00528Q8N1L1 170 aa10.66□□□□□ -0.7
RTTN-217ENST00000640393 TSEN34Q9BSV6 310 aaKnown RBP10.66□□□□□ -0.7
RTTN-217ENST00000640393 PPP1R15AO75807 674 aaPredicted RBP10.65□□□□□ -0.7
RTTN-217ENST00000640393 GNRH1P01148 92 aa10.65□□□□□ -0.7
RTTN-217ENST00000640393 SCARF1Q14162 830 aa10.65□□□□□ -0.7
RTTN-217ENST00000640393 LARGE2Q8N3Y3 721 aa10.65□□□□□ -0.7
RTTN-217ENST00000640393 NLRP3Q96P20 1036 aa10.65□□□□□ -0.7
RTTN-217ENST00000640393 INSM2Q96T92 566 aaPredicted RBP10.65□□□□□ -0.7
RTTN-217ENST00000640393 ETNK1Q9HBU6 452 aa10.65□□□□□ -0.7
RTTN-217ENST00000640393 NOVA2Q9UNW9 492 aaKnown RBP10.65□□□□□ -0.7
RTTN-217ENST00000640393 FAM196BA6NMK8 535 aa10.65□□□□□ -0.71
RTTN-217ENST00000640393 TRIM46Q7Z4K8 759 aa10.65□□□□□ -0.71
RTTN-217ENST00000640393 FAM200AQ8TCP9 573 aa10.65□□□□□ -0.71
RTTN-217ENST00000640393 POLMQ9NP87 494 aaPredicted RBP10.65□□□□□ -0.71
RTTN-217ENST00000640393 CARNS1A5YM72 827 aa10.64□□□□□ -0.71
RTTN-217ENST00000640393 SMCPP49901 116 aaPredicted RBP10.64□□□□□ -0.71
RTTN-217ENST00000640393 ANKMY2Q8IV38 441 aa10.64□□□□□ -0.71
RTTN-217ENST00000640393 CNKSR1Q969H4 720 aa10.64□□□□□ -0.71
RTTN-217ENST00000640393 HINFPQ9BQA5 517 aa10.64□□□□□ -0.71
RTTN-217ENST00000640393 FIGNL2A6NMB9 653 aa10.63□□□□□ -0.71
RTTN-217ENST00000640393 TMEM229AB2RXF0 380 aa10.63□□□□□ -0.71
RTTN-217ENST00000640393 SCNN1DP51172 638 aa10.63□□□□□ -0.71
RTTN-217ENST00000640393 ZFP42Q96MM3 310 aa10.63□□□□□ -0.71
RTTN-217ENST00000640393 ATG7O95352 703 aa10.62□□□□□ -0.71
RTTN-217ENST00000640393 IL2RAP01589 272 aa10.62□□□□□ -0.71
RTTN-217ENST00000640393 INHAP05111 366 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms