RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 TBC1D9Q6ZT07 1266 aa9.96□□□□□ -0.81
ALMS1-208ENST00000620466 SPC24Q8NBT2 197 aa9.96□□□□□ -0.81
ALMS1-208ENST00000620466 EIF4G3O43432 1585 aaKnown RBP9.96□□□□□ -0.81
ALMS1-208ENST00000620466 IL16Q14005 1332 aa9.96□□□□□ -0.82
ALMS1-208ENST00000620466 HOMER1Q86YM7 354 aa9.96□□□□□ -0.82
ALMS1-208ENST00000620466 STK3Q13188 491 aa9.96□□□□□ -0.82
ALMS1-208ENST00000620466 HDAC1Q13547 482 aaPredicted RBP9.96□□□□□ -0.82
ALMS1-208ENST00000620466 WASHC4Q2M389 1173 aa9.96□□□□□ -0.82
ALMS1-208ENST00000620466 NLRP2Q9NX02 1062 aa9.96□□□□□ -0.82
ALMS1-208ENST00000620466 MAST1Q9Y2H9 1570 aa9.96□□□□□ -0.82
ALMS1-208ENST00000620466 POLR3AO14802 1390 aaPredicted RBP9.96□□□□□ -0.82
ALMS1-208ENST00000620466 SYCE3A1L190 88 aa9.96□□□□□ -0.82
ALMS1-208ENST00000620466 NUCB1Q02818 461 aa9.96□□□□□ -0.82
ALMS1-208ENST00000620466 CWC27Q6UX04 472 aaKnown RBP9.96□□□□□ -0.82
ALMS1-208ENST00000620466 MPNDQ8N594 471 aa9.96□□□□□ -0.82
ALMS1-208ENST00000620466 PKNOX2Q96KN3 472 aa9.96□□□□□ -0.82
ALMS1-208ENST00000620466 TRIM5Q9C035 493 aa9.96□□□□□ -0.82
ALMS1-208ENST00000620466 ESCO1Q5FWF5 840 aa9.95□□□□□ -0.82
ALMS1-208ENST00000620466 PDRG1Q9NUG6 133 aa9.95□□□□□ -0.82
ALMS1-208ENST00000620466 SRGAP3O43295 1099 aa9.95□□□□□ -0.82
ALMS1-208ENST00000620466 MX1P20591 662 aa9.95□□□□□ -0.82
ALMS1-208ENST00000620466 MAP7D2Q96T17 732 aa9.95□□□□□ -0.82
ALMS1-208ENST00000620466 SIL1Q9H173 461 aa9.95□□□□□ -0.82
ALMS1-208ENST00000620466 RNF123Q5XPI4 1314 aa9.95□□□□□ -0.82
ALMS1-208ENST00000620466 BMP2KLQ5H9B9 411 aa9.95□□□□□ -0.82
ALMS1-208ENST00000620466 NAT10Q9H0A0 1025 aaKnown RBP9.95□□□□□ -0.82
ALMS1-208ENST00000620466 MBIPQ9NS73 344 aa9.95□□□□□ -0.82
ALMS1-208ENST00000620466 BLMP54132 1417 aaPredicted RBP9.95□□□□□ -0.82
ALMS1-208ENST00000620466 GNAT3A8MTJ3 354 aa9.94□□□□□ -0.82
ALMS1-208ENST00000620466 MTERF4Q7Z6M4 381 aaKnown RBP9.94□□□□□ -0.82
ALMS1-208ENST00000620466 TRAPPC8Q9Y2L5 1435 aa9.94□□□□□ -0.82
ALMS1-208ENST00000620466 DCAF8L1A6NGE4 600 aa9.94□□□□□ -0.82
ALMS1-208ENST00000620466 PDCP20941 246 aa9.94□□□□□ -0.82
ALMS1-208ENST00000620466 UQCRHLA0A096LP55 91 aa9.94□□□□□ -0.82
ALMS1-208ENST00000620466 KDM4AO75164 1064 aa9.94□□□□□ -0.82
ALMS1-208ENST00000620466 UQCRHP07919 91 aa9.94□□□□□ -0.82
ALMS1-208ENST00000620466 CEBPZQ03701 1054 aaKnown RBP9.94□□□□□ -0.82
ALMS1-208ENST00000620466 AACSQ86V21 672 aa9.94□□□□□ -0.82
ALMS1-208ENST00000620466 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.94□□□□□ -0.82
ALMS1-208ENST00000620466 JAKMIP1Q96N16 626 aaKnown RBP9.94□□□□□ -0.82
ALMS1-208ENST00000620466 CCDC61Q9Y6R9 512 aa9.94□□□□□ -0.82
ALMS1-208ENST00000620466 KIF6Q6ZMV9 814 aa9.93□□□□□ -0.82
ALMS1-208ENST00000620466 RALYLQ86SE5 291 aaKnown RBP9.93□□□□□ -0.82
ALMS1-208ENST00000620466 CCDC192P0DO97 292 aa9.93□□□□□ -0.82
ALMS1-208ENST00000620466 MTMR7Q9Y216 660 aa9.93□□□□□ -0.82
ALMS1-208ENST00000620466 IDI1Q13907 227 aa9.93□□□□□ -0.82
ALMS1-208ENST00000620466 F6X3S4 739 aa9.93□□□□□ -0.82
ALMS1-208ENST00000620466 KDM2BQ8NHM5 1336 aa9.93□□□□□ -0.82
ALMS1-208ENST00000620466 GPS2Q13227 327 aa9.93□□□□□ -0.82
ALMS1-208ENST00000620466 ANKRD1Q15327 319 aa9.93□□□□□ -0.82
ALMS1-208ENST00000620466 ZNF530Q6P9A1 599 aaPredicted RBP9.93□□□□□ -0.82
ALMS1-208ENST00000620466 SPATA31E1Q6ZUB1 1445 aa9.93□□□□□ -0.82
ALMS1-208ENST00000620466 BTBD11A6QL63 1104 aa9.93□□□□□ -0.82
ALMS1-208ENST00000620466 NAP1L1P55209 391 aaKnown RBP9.93□□□□□ -0.82
ALMS1-208ENST00000620466 ZSCAN30Q86W11 494 aa9.93□□□□□ -0.82
ALMS1-208ENST00000620466 TNMDQ9H2S6 317 aa9.93□□□□□ -0.82
ALMS1-208ENST00000620466 KDM5CP41229 1560 aa9.92□□□□□ -0.82
ALMS1-208ENST00000620466 RLBP1P12271 317 aa9.92□□□□□ -0.82
ALMS1-208ENST00000620466 CARD14Q9BXL6 1004 aa9.92□□□□□ -0.82
ALMS1-208ENST00000620466 BRMS1Q9HCU9 246 aa9.92□□□□□ -0.82
ALMS1-208ENST00000620466 SPINK5Q9NQ38 1064 aaPredicted RBP9.92□□□□□ -0.82
ALMS1-208ENST00000620466 IPO7O95373 1038 aaKnown RBP9.92□□□□□ -0.82
ALMS1-208ENST00000620466 CASTP20810 708 aaKnown RBP9.92□□□□□ -0.82
ALMS1-208ENST00000620466 EPS15P42566 896 aa9.92□□□□□ -0.82
ALMS1-208ENST00000620466 TTC22Q5TAA0 569 aa9.92□□□□□ -0.82
ALMS1-208ENST00000620466 FBXO31Q5XUX0 539 aaPredicted RBP9.92□□□□□ -0.82
ALMS1-208ENST00000620466 LARP1BQ659C4 914 aaKnown RBP9.92□□□□□ -0.82
ALMS1-208ENST00000620466 FAM83GA6ND36 823 aa9.92□□□□□ -0.82
ALMS1-208ENST00000620466 WASLO00401 505 aaPredicted RBP9.92□□□□□ -0.82
ALMS1-208ENST00000620466 SEC24BO95487 1268 aa9.92□□□□□ -0.82
ALMS1-208ENST00000620466 SDF4Q9BRK5 362 aa9.92□□□□□ -0.82
ALMS1-208ENST00000620466 ZSCAN31Q96LW9 406 aaPredicted RBP9.92□□□□□ -0.82
ALMS1-208ENST00000620466 ZNF396Q96N95 335 aaPredicted RBP9.92□□□□□ -0.82
ALMS1-208ENST00000620466 SLC26A8Q96RN1 970 aa9.92□□□□□ -0.82
ALMS1-208ENST00000620466 PTPRCP08575 1304 aa9.92□□□□□ -0.82
ALMS1-208ENST00000620466 IKQ13123 557 aaPredicted RBP9.91□□□□□ -0.82
ALMS1-208ENST00000620466 KINO60870 393 aaKnown RBP9.91□□□□□ -0.82
ALMS1-208ENST00000620466 KRT85P78386 507 aa9.91□□□□□ -0.82
ALMS1-208ENST00000620466 SAFBQ15424 915 aaKnown RBP eCLIP9.91□□□□□ -0.82
ALMS1-208ENST00000620466 MYL6BP14649 208 aa9.91□□□□□ -0.82
ALMS1-208ENST00000620466 FBLN1P23142 703 aa9.91□□□□□ -0.82
ALMS1-208ENST00000620466 OLFM4Q6UX06 510 aa9.91□□□□□ -0.82
ALMS1-208ENST00000620466 RAB11FIP3O75154 756 aa9.91□□□□□ -0.82
ALMS1-208ENST00000620466 SMC2O95347 1197 aa9.91□□□□□ -0.82
ALMS1-208ENST00000620466 FAM177BA6PVY3 158 aa9.9□□□□□ -0.82
ALMS1-208ENST00000620466 TMEM132AQ24JP5 1023 aa9.9□□□□□ -0.82
ALMS1-208ENST00000620466 ODF2Q5BJF6 829 aa9.9□□□□□ -0.82
ALMS1-208ENST00000620466 CT47A1Q5JQC4 288 aaPredicted RBP9.9□□□□□ -0.82
ALMS1-208ENST00000620466 HMGN5P82970 282 aaKnown RBP9.9□□□□□ -0.82
ALMS1-208ENST00000620466 MRPL50Q8N5N7 158 aaKnown RBP9.9□□□□□ -0.82
ALMS1-208ENST00000620466 TTC39AQ5SRH9 613 aa9.9□□□□□ -0.82
ALMS1-208ENST00000620466 BAG4O95429 457 aaKnown RBP9.9□□□□□ -0.83
ALMS1-208ENST00000620466 UPF3BQ9BZI7 483 aaKnown RBP9.9□□□□□ -0.83
ALMS1-208ENST00000620466 BLOC1S2Q6QNY1 142 aa9.89□□□□□ -0.83
ALMS1-208ENST00000620466 CCDC83Q8IWF9 413 aa9.89□□□□□ -0.83
ALMS1-208ENST00000620466 MNS1Q8NEH6 495 aa9.89□□□□□ -0.83
ALMS1-208ENST00000620466 SPATA32Q96LK8 384 aa9.89□□□□□ -0.83
ALMS1-208ENST00000620466 LRRFIP2Q9Y608 721 aaKnown RBP9.89□□□□□ -0.83
ALMS1-208ENST00000620466 KIF1BPQ96EK5 621 aa9.89□□□□□ -0.83
ALMS1-208ENST00000620466 PDILTQ8N807 584 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms