RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 LYSMD3Q7Z3D4 306 aa8.78□□□□□ -1
NEAT1-205ENST00000616315 SCARF2Q96GP6 870 aaPredicted RBP8.78□□□□□ -1
NEAT1-205ENST00000616315 IGHA1P01876 353 aa8.77□□□□□ -1.01
NEAT1-205ENST00000616315 RHOQP17081 205 aa8.77□□□□□ -1.01
NEAT1-205ENST00000616315 PRICKLE2Q7Z3G6 844 aa8.77□□□□□ -1.01
NEAT1-205ENST00000616315 DZIP3Q86Y13 1208 aaKnown RBP8.77□□□□□ -1.01
NEAT1-205ENST00000616315 CYLDQ9NQC7 956 aa8.76□□□□□ -1.01
NEAT1-205ENST00000616315 ZNF837Q96EG3 531 aaPredicted RBP8.75□□□□□ -1.01
NEAT1-205ENST00000616315 FAM117AQ9C073 453 aa8.75□□□□□ -1.01
NEAT1-205ENST00000616315 GPBP1L1Q9HC44 474 aaPredicted RBP8.75□□□□□ -1.01
NEAT1-205ENST00000616315 GPR25O00155 361 aa8.74□□□□□ -1.01
NEAT1-205ENST00000616315 RNF144AP50876 292 aaPredicted RBP8.74□□□□□ -1.01
NEAT1-205ENST00000616315 MAP3K10Q02779 954 aa8.74□□□□□ -1.01
NEAT1-205ENST00000616315 USP17L8P0C7I0 530 aa8.73□□□□□ -1.01
NEAT1-205ENST00000616315 FOXK2Q01167 660 aa8.73□□□□□ -1.01
NEAT1-205ENST00000616315 DBN1Q16643 649 aa8.73□□□□□ -1.01
NEAT1-205ENST00000616315 CNTNAP5Q8WYK1 1306 aa8.73□□□□□ -1.01
NEAT1-205ENST00000616315 ITGB2P05107 769 aa8.72□□□□□ -1.01
NEAT1-205ENST00000616315 TRIM22Q8IYM9 498 aa8.72□□□□□ -1.01
NEAT1-205ENST00000616315 KDM4CQ9H3R0 1056 aa8.72□□□□□ -1.01
NEAT1-205ENST00000616315 ATP1B4Q9UN42 357 aaPredicted RBP8.72□□□□□ -1.01
NEAT1-205ENST00000616315 MBIPQ9NS73 344 aa8.71□□□□□ -1.02
NEAT1-205ENST00000616315 IGF1RP08069 1367 aa8.71□□□□□ -1.02
NEAT1-205ENST00000616315 PLA2G4EQ3MJ16 856 aa8.7□□□□□ -1.02
NEAT1-205ENST00000616315 TRIM34Q9BYJ4 488 aa8.7□□□□□ -1.02
NEAT1-205ENST00000616315 GIGYF1O75420 1035 aaPredicted RBP8.69□□□□□ -1.02
NEAT1-205ENST00000616315 RIPOR1Q6ZS17 1223 aa8.69□□□□□ -1.02
NEAT1-205ENST00000616315 SEPT12Q8IYM1 358 aa8.69□□□□□ -1.02
NEAT1-205ENST00000616315 PNMA1Q8ND90 353 aa8.69□□□□□ -1.02
NEAT1-205ENST00000616315 ACDQ96AP0 544 aa8.69□□□□□ -1.02
NEAT1-205ENST00000616315 DCAF5Q96JK2 942 aa8.69□□□□□ -1.02
NEAT1-205ENST00000616315 ENAMQ9NRM1 1142 aa8.69□□□□□ -1.02
NEAT1-205ENST00000616315 A0A1W2PRU2 124 aa8.68□□□□□ -1.02
NEAT1-205ENST00000616315 ATP5J2-PTCD1G3V325 749 aa8.68□□□□□ -1.02
NEAT1-205ENST00000616315 MEN1O00255 615 aa8.68□□□□□ -1.02
NEAT1-205ENST00000616315 GTPBP3Q969Y2 492 aaKnown RBP8.68□□□□□ -1.02
NEAT1-205ENST00000616315 GMCL1Q96IK5 515 aa8.68□□□□□ -1.02
NEAT1-205ENST00000616315 GPC1P35052 558 aa8.67□□□□□ -1.02
NEAT1-205ENST00000616315 RFC5P40937 340 aa8.67□□□□□ -1.02
NEAT1-205ENST00000616315 POU4F2Q12837 409 aa8.67□□□□□ -1.02
NEAT1-205ENST00000616315 C14orf37Q86TY3 774 aa8.67□□□□□ -1.02
NEAT1-205ENST00000616315 DDRGK1Q96HY6 314 aa8.67□□□□□ -1.02
NEAT1-205ENST00000616315 BCRP11274 1271 aa8.66□□□□□ -1.02
NEAT1-205ENST00000616315 SPOCK3Q9BQ16 436 aa8.66□□□□□ -1.02
NEAT1-205ENST00000616315 DYRK1BQ9Y463 629 aa8.66□□□□□ -1.02
NEAT1-205ENST00000616315 PHF20L1A8MW92 1017 aa8.65□□□□□ -1.02
NEAT1-205ENST00000616315 MSTNO14793 375 aa8.65□□□□□ -1.02
NEAT1-205ENST00000616315 FOXR1Q6PIV2 292 aa8.65□□□□□ -1.02
NEAT1-205ENST00000616315 GAS2L1Q99501 681 aaPredicted RBP8.65□□□□□ -1.02
NEAT1-205ENST00000616315 ERVK-9P63128 1117 aa8.64□□□□□ -1.03
NEAT1-205ENST00000616315 BEND7Q8N7W2 519 aaPredicted RBP8.64□□□□□ -1.03
NEAT1-205ENST00000616315 NEDD1Q8NHV4 660 aa8.64□□□□□ -1.03
NEAT1-205ENST00000616315 GRIP2Q9C0E4 1043 aa8.64□□□□□ -1.03
NEAT1-205ENST00000616315 PCDHB9Q9Y5E1 797 aa8.64□□□□□ -1.03
NEAT1-205ENST00000616315 ZBBXA8MT70 800 aa8.63□□□□□ -1.03
NEAT1-205ENST00000616315 ADAM23O75077 832 aa8.63□□□□□ -1.03
NEAT1-205ENST00000616315 PROCP04070 461 aa8.63□□□□□ -1.03
NEAT1-205ENST00000616315 FBXO45P0C2W1 286 aa8.63□□□□□ -1.03
NEAT1-205ENST00000616315 H7C1W4 665 aa8.62□□□□□ -1.03
NEAT1-205ENST00000616315 SCTRP47872 440 aa8.62□□□□□ -1.03
NEAT1-205ENST00000616315 XP32Q5T750 250 aa8.62□□□□□ -1.03
NEAT1-205ENST00000616315 CC2D2BQ6DHV5 1058 aa8.62□□□□□ -1.03
NEAT1-205ENST00000616315 NBPF10Q6P3W6 841 aaKnown RBP8.62□□□□□ -1.03
NEAT1-205ENST00000616315 NBPF15Q8N660 670 aa8.62□□□□□ -1.03
NEAT1-205ENST00000616315 THBS1P07996 1170 aa8.61□□□□□ -1.03
NEAT1-205ENST00000616315 SLC27A3Q5K4L6 730 aa8.61□□□□□ -1.03
NEAT1-205ENST00000616315 GJD4Q96KN9 370 aaPredicted RBP8.61□□□□□ -1.03
NEAT1-205ENST00000616315 MX2P20592 715 aa8.6□□□□□ -1.03
NEAT1-205ENST00000616315 PODNQ7Z5L7 613 aa8.6□□□□□ -1.03
NEAT1-205ENST00000616315 NLRP3Q96P20 1036 aa8.6□□□□□ -1.03
NEAT1-205ENST00000616315 TRERF1Q96PN7 1200 aa8.6□□□□□ -1.03
NEAT1-205ENST00000616315 SPATA31C2B4DYI2 1134 aa8.59□□□□□ -1.03
NEAT1-205ENST00000616315 OIP5O43482 229 aa8.59□□□□□ -1.03
NEAT1-205ENST00000616315 CLN3Q13286 438 aa8.59□□□□□ -1.03
NEAT1-205ENST00000616315 SNRPNP63162 240 aaKnown RBP8.58□□□□□ -1.04
NEAT1-205ENST00000616315 IL27Q8NEV9 243 aa8.58□□□□□ -1.04
NEAT1-205ENST00000616315 TRIM52Q96A61 297 aa8.58□□□□□ -1.04
NEAT1-205ENST00000616315 NUCKS1Q9H1E3 243 aaKnown RBP8.58□□□□□ -1.04
NEAT1-205ENST00000616315 OSBPL3Q9H4L5 887 aa8.58□□□□□ -1.04
NEAT1-205ENST00000616315 TIMMDC1Q9NPL8 285 aa8.58□□□□□ -1.04
NEAT1-205ENST00000616315 LRRC4BQ9NT99 713 aa8.58□□□□□ -1.04
NEAT1-205ENST00000616315 TRAK2O60296 914 aa8.57□□□□□ -1.04
NEAT1-205ENST00000616315 F11P03951 625 aa8.57□□□□□ -1.04
NEAT1-205ENST00000616315 C1orf229Q6ZS94 237 aaPredicted RBP8.57□□□□□ -1.04
NEAT1-205ENST00000616315 ARHGEF10LQ9HCE6 1279 aa8.57□□□□□ -1.04
NEAT1-205ENST00000616315 SHISA8B8ZZ34 492 aa8.56□□□□□ -1.04
NEAT1-205ENST00000616315 WASLO00401 505 aaPredicted RBP8.56□□□□□ -1.04
NEAT1-205ENST00000616315 WDR44Q5JSH3 913 aa8.56□□□□□ -1.04
NEAT1-205ENST00000616315 CYP2U1Q7Z449 544 aa8.56□□□□□ -1.04
NEAT1-205ENST00000616315 KRBA1A5PL33 1030 aa8.55□□□□□ -1.04
NEAT1-205ENST00000616315 TMEM259Q4ZIN3 620 aa8.55□□□□□ -1.04
NEAT1-205ENST00000616315 TAS1R3Q7RTX0 852 aa8.55□□□□□ -1.04
NEAT1-205ENST00000616315 CCDC125Q86Z20 511 aa8.55□□□□□ -1.04
NEAT1-205ENST00000616315 OXCT2Q9BYC2 517 aaPredicted RBP8.55□□□□□ -1.04
NEAT1-205ENST00000616315 RAB6BQ9NRW1 208 aa8.55□□□□□ -1.04
NEAT1-205ENST00000616315 PCDHB11Q9Y5F2 797 aa8.55□□□□□ -1.04
NEAT1-205ENST00000616315 RNF20Q5VTR2 975 aa8.54□□□□□ -1.04
NEAT1-205ENST00000616315 NSFL1CQ9UNZ2 370 aaKnown RBP8.54□□□□□ -1.04
NEAT1-205ENST00000616315 IL2RAP01589 272 aa8.53□□□□□ -1.04
NEAT1-205ENST00000616315 MAP2K3P46734 347 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms