RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 TMOD2Q9NZR1 351 aa18.2■□□□□ 0.5
TNXB-209ENST00000613214 PUS7Q96PZ0 661 aaKnown RBP18.2■□□□□ 0.5
TNXB-209ENST00000613214 ARHGAP5Q13017 1502 aa18.2■□□□□ 0.5
TNXB-209ENST00000613214 GOPCQ9HD26 462 aa18.2■□□□□ 0.5
TNXB-209ENST00000613214 LEKR1Q6ZMV7 388 aa18.2■□□□□ 0.5
TNXB-209ENST00000613214 KIF7Q2M1P5 1343 aa18.19■□□□□ 0.5
TNXB-209ENST00000613214 EIF5P55010 431 aaKnown RBP18.19■□□□□ 0.5
TNXB-209ENST00000613214 ANKRD18AQ8IVF6 992 aa18.19■□□□□ 0.5
TNXB-209ENST00000613214 MKNK2Q9HBH9 465 aa18.19■□□□□ 0.5
TNXB-209ENST00000613214 HMGN5P82970 282 aaKnown RBP18.19■□□□□ 0.5
TNXB-209ENST00000613214 SPTY2D1Q68D10 685 aaPredicted RBP18.19■□□□□ 0.5
TNXB-209ENST00000613214 CCDC112Q8NEF3 446 aa18.19■□□□□ 0.5
TNXB-209ENST00000613214 AIDAQ96BJ3 306 aa18.19■□□□□ 0.5
TNXB-209ENST00000613214 NOL7Q9UMY1 257 aaKnown RBP18.19■□□□□ 0.5
TNXB-209ENST00000613214 HIP1O00291 1037 aa18.19■□□□□ 0.5
TNXB-209ENST00000613214 CEP57L1Q8IYX8 460 aa18.19■□□□□ 0.5
TNXB-209ENST00000613214 VAT1LQ9HCJ6 419 aa18.19■□□□□ 0.5
TNXB-209ENST00000613214 RAD54L2Q9Y4B4 1467 aa18.19■□□□□ 0.5
TNXB-209ENST00000613214 ERICH4A6NGS2 130 aa18.18■□□□□ 0.5
TNXB-209ENST00000613214 SERPINA10Q9UK55 444 aa18.18■□□□□ 0.5
TNXB-209ENST00000613214 MMRN2Q9H8L6 949 aa18.18■□□□□ 0.5
TNXB-209ENST00000613214 PDRG1Q9NUG6 133 aa18.18■□□□□ 0.5
TNXB-209ENST00000613214 FILIP1Q7Z7B0 1213 aa18.17■□□□□ 0.5
TNXB-209ENST00000613214 RAB11FIP4Q86YS3 637 aa18.17■□□□□ 0.5
TNXB-209ENST00000613214 SRCIN1Q9C0H9 1055 aa18.17■□□□□ 0.5
TNXB-209ENST00000613214 BRPF3Q9ULD4 1205 aa18.17■□□□□ 0.5
TNXB-209ENST00000613214 MYD88Q99836 296 aa18.17■□□□□ 0.5
TNXB-209ENST00000613214 THUMPD2Q9BTF0 503 aaKnown RBP18.17■□□□□ 0.5
TNXB-209ENST00000613214 BMP2KQ9NSY1 1161 aaPredicted RBP18.17■□□□□ 0.5
TNXB-209ENST00000613214 COMMD10Q9Y6G5 202 aa18.17■□□□□ 0.5
TNXB-209ENST00000613214 GPTP24298 496 aa18.16■□□□□ 0.5
TNXB-209ENST00000613214 JARID2Q92833 1246 aaPredicted RBP18.16■□□□□ 0.5
TNXB-209ENST00000613214 BCCIPQ9P287 314 aaKnown RBP eCLIP18.16■□□□□ 0.5
TNXB-209ENST00000613214 SEC63Q9UGP8 760 aaKnown RBP18.16■□□□□ 0.5
TNXB-209ENST00000613214 RANBP6O60518 1105 aaKnown RBP18.16■□□□□ 0.5
TNXB-209ENST00000613214 SPATA32Q96LK8 384 aa18.16■□□□□ 0.5
TNXB-209ENST00000613214 NBPF1Q3BBV0 1214 aa18.15■□□□□ 0.5
TNXB-209ENST00000613214 GOLGA6L10A0A0M3HER8 536 aa18.15■□□□□ 0.5
TNXB-209ENST00000613214 CASTP20810 708 aaKnown RBP18.15■□□□□ 0.5
TNXB-209ENST00000613214 TERF1P54274 439 aa18.15■□□□□ 0.5
TNXB-209ENST00000613214 DZIP1Q86YF9 867 aaKnown RBP18.15■□□□□ 0.5
TNXB-209ENST00000613214 FERMT3Q86UX7 667 aa18.15■□□□□ 0.5
TNXB-209ENST00000613214 ZBTB9Q96C00 473 aa18.15■□□□□ 0.5
TNXB-209ENST00000613214 VTI1AQ96AJ9 217 aa18.15■□□□□ 0.5
TNXB-209ENST00000613214 DRC1Q96MC2 740 aa18.15■□□□□ 0.5
TNXB-209ENST00000613214 CEP126Q9P2H0 1117 aa18.15■□□□□ 0.5
TNXB-209ENST00000613214 RUSC2Q8N2Y8 1516 aa18.15■□□□□ 0.5
TNXB-209ENST00000613214 MCM10Q7L590 875 aa18.15■□□□□ 0.5
TNXB-209ENST00000613214 PPP2R1AP30153 589 aa18.14■□□□□ 0.49
TNXB-209ENST00000613214 CCDC102AQ96A19 550 aa18.14■□□□□ 0.49
TNXB-209ENST00000613214 DESP17661 470 aa18.14■□□□□ 0.49
TNXB-209ENST00000613214 UBE4AQ14139 1066 aa18.14■□□□□ 0.49
TNXB-209ENST00000613214 BOLA2Q9H3K6 86 aa18.14■□□□□ 0.49
TNXB-209ENST00000613214 ZNF622Q969S3 477 aaKnown RBP eCLIP18.13■□□□□ 0.49
TNXB-209ENST00000613214 CCDC178Q5BJE1 867 aa18.13■□□□□ 0.49
TNXB-209ENST00000613214 BLOC1S2Q6QNY1 142 aa18.13■□□□□ 0.49
TNXB-209ENST00000613214 CWC15Q9P013 229 aaKnown RBP18.13■□□□□ 0.49
TNXB-209ENST00000613214 EXOC6BQ9Y2D4 811 aa18.13■□□□□ 0.49
TNXB-209ENST00000613214 JMYQ8N9B5 988 aa18.13■□□□□ 0.49
TNXB-209ENST00000613214 LETM1O95202 739 aaPredicted RBP18.13■□□□□ 0.49
TNXB-209ENST00000613214 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.13■□□□□ 0.49
TNXB-209ENST00000613214 KIAA0754O94854 1291 aa18.12■□□□□ 0.49
TNXB-209ENST00000613214 RPGRQ92834 1020 aaKnown RBP18.12■□□□□ 0.49
TNXB-209ENST00000613214 PUF60Q9UHX1 559 aaKnown RBP18.12■□□□□ 0.49
TNXB-209ENST00000613214 ZSCAN25Q6NSZ9 544 aa18.12■□□□□ 0.49
TNXB-209ENST00000613214 ISM2Q6H9L7 571 aa18.12■□□□□ 0.49
TNXB-209ENST00000613214 TMOD3Q9NYL9 352 aa18.12■□□□□ 0.49
TNXB-209ENST00000613214 EZRP15311 586 aaKnown RBP18.11■□□□□ 0.49
TNXB-209ENST00000613214 C6orf229H3BNL8 230 aa18.11■□□□□ 0.49
TNXB-209ENST00000613214 PDCP20941 246 aa18.11■□□□□ 0.49
TNXB-209ENST00000613214 CPLX3Q8WVH0 158 aa18.11■□□□□ 0.49
TNXB-209ENST00000613214 CCDC192P0DO97 292 aa18.11■□□□□ 0.49
TNXB-209ENST00000613214 DACH1Q9UI36 760 aa18.11■□□□□ 0.49
TNXB-209ENST00000613214 USP8P40818 1118 aa18.11■□□□□ 0.49
TNXB-209ENST00000613214 PPP4R3AQ6IN85 833 aa18.11■□□□□ 0.49
TNXB-209ENST00000613214 ZNF354CQ86Y25 554 aa18.1■□□□□ 0.49
TNXB-209ENST00000613214 CCDC83Q8IWF9 413 aa18.1■□□□□ 0.49
TNXB-209ENST00000613214 F8W031 263 aaPredicted RBP18.1■□□□□ 0.49
TNXB-209ENST00000613214 TNIP1Q15025 636 aa18.1■□□□□ 0.49
TNXB-209ENST00000613214 PIP4K2AP48426 406 aaPredicted RBP18.09■□□□□ 0.49
TNXB-209ENST00000613214 CAVIN4Q5BKX8 364 aa18.09■□□□□ 0.49
TNXB-209ENST00000613214 LUC7LQ9NQ29 371 aaKnown RBP18.09■□□□□ 0.49
TNXB-209ENST00000613214 NGLY1Q96IV0 654 aa18.09■□□□□ 0.49
TNXB-209ENST00000613214 SAMM50Q9Y512 469 aa18.09■□□□□ 0.49
TNXB-209ENST00000613214 DYDC1Q8WWB3 177 aa18.09■□□□□ 0.49
TNXB-209ENST00000613214 TAF4BQ92750 862 aa18.09■□□□□ 0.49
TNXB-209ENST00000613214 CCDC8Q9H0W5 538 aaPredicted RBP18.09■□□□□ 0.49
TNXB-209ENST00000613214 CLEC11AQ9Y240 323 aa18.09■□□□□ 0.49
TNXB-209ENST00000613214 RAPGEF3O95398 923 aa18.09■□□□□ 0.49
TNXB-209ENST00000613214 IMMTQ16891 758 aaKnown RBP18.09■□□□□ 0.49
TNXB-209ENST00000613214 CFAP100Q494V2 611 aa18.09■□□□□ 0.49
TNXB-209ENST00000613214 STARD3NLO95772 234 aa18.08■□□□□ 0.49
TNXB-209ENST00000613214 MRE11P49959 708 aa18.08■□□□□ 0.48
TNXB-209ENST00000613214 FEZ1Q99689 392 aa18.08■□□□□ 0.48
TNXB-209ENST00000613214 CCT4P50991 539 aaKnown RBP18.08■□□□□ 0.48
TNXB-209ENST00000613214 KRT85P78386 507 aa18.08■□□□□ 0.48
TNXB-209ENST00000613214 JAKMIP3Q5VZ66 844 aa18.08■□□□□ 0.48
TNXB-209ENST00000613214 EPB41L2O43491 1005 aaKnown RBP18.07■□□□□ 0.48
TNXB-209ENST00000613214 TRIM21P19474 475 aaKnown RBP18.07■□□□□ 0.48
TNXB-209ENST00000613214 CCT2P78371 535 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms