RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 RABEP1Q15276 862 aa11.23□□□□□ -0.61
SRGAP2B-204ENST00000612199 C20orf194Q5TEA3 1177 aa11.23□□□□□ -0.61
SRGAP2B-204ENST00000612199 PRDM11Q9NQV5 511 aa11.23□□□□□ -0.61
SRGAP2B-204ENST00000612199 ATAD2Q6PL18 1390 aa11.23□□□□□ -0.61
SRGAP2B-204ENST00000612199 CABP4P57796 275 aa11.23□□□□□ -0.61
SRGAP2B-204ENST00000612199 BACH2Q9BYV9 841 aa11.23□□□□□ -0.61
SRGAP2B-204ENST00000612199 PABPN1LA6NDY0 278 aaKnown RBP11.23□□□□□ -0.61
SRGAP2B-204ENST00000612199 KAT6BQ8WYB5 2073 aa11.23□□□□□ -0.61
SRGAP2B-204ENST00000612199 WWC3Q9ULE0 1092 aa11.22□□□□□ -0.61
SRGAP2B-204ENST00000612199 CCDC73Q6ZRK6 1079 aa11.22□□□□□ -0.61
SRGAP2B-204ENST00000612199 USHBP1Q8N6Y0 703 aa11.22□□□□□ -0.61
SRGAP2B-204ENST00000612199 ADGRL1O94910 1474 aa11.22□□□□□ -0.61
SRGAP2B-204ENST00000612199 NOM1Q5C9Z4 860 aaKnown RBP11.22□□□□□ -0.61
SRGAP2B-204ENST00000612199 PSMA5P28066 241 aa11.22□□□□□ -0.61
SRGAP2B-204ENST00000612199 SLFN5Q08AF3 891 aa11.22□□□□□ -0.61
SRGAP2B-204ENST00000612199 EMILIN1Q9Y6C2 1016 aa11.22□□□□□ -0.61
SRGAP2B-204ENST00000612199 FCHSD2O94868 740 aa11.22□□□□□ -0.61
SRGAP2B-204ENST00000612199 PPP4R4Q6NUP7 873 aa11.22□□□□□ -0.61
SRGAP2B-204ENST00000612199 HOOK1Q9UJC3 728 aaKnown RBP11.22□□□□□ -0.61
SRGAP2B-204ENST00000612199 SRCIN1Q9C0H9 1055 aa11.21□□□□□ -0.61
SRGAP2B-204ENST00000612199 IL1RAPL2Q9NP60 686 aa11.21□□□□□ -0.61
SRGAP2B-204ENST00000612199 MBD3O95983 291 aa11.21□□□□□ -0.61
SRGAP2B-204ENST00000612199 KRT18P05783 430 aaKnown RBP11.21□□□□□ -0.61
SRGAP2B-204ENST00000612199 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.21□□□□□ -0.61
SRGAP2B-204ENST00000612199 TMEM57Q8N5G2 664 aa11.21□□□□□ -0.61
SRGAP2B-204ENST00000612199 CUL7Q14999 1698 aa11.21□□□□□ -0.62
SRGAP2B-204ENST00000612199 RNF214Q8ND24 703 aa11.21□□□□□ -0.62
SRGAP2B-204ENST00000612199 ANKRD20A12PQ8NF67 263 aa11.21□□□□□ -0.62
SRGAP2B-204ENST00000612199 CCDC85AQ96PX6 553 aaPredicted RBP11.21□□□□□ -0.62
SRGAP2B-204ENST00000612199 FBLN1P23142 703 aa11.21□□□□□ -0.62
SRGAP2B-204ENST00000612199 BEGAINQ9BUH8 593 aa11.21□□□□□ -0.62
SRGAP2B-204ENST00000612199 FLIIQ13045 1269 aa11.2□□□□□ -0.62
SRGAP2B-204ENST00000612199 NFE2L2Q16236 605 aa11.2□□□□□ -0.62
SRGAP2B-204ENST00000612199 BTBD11A6QL63 1104 aa11.2□□□□□ -0.62
SRGAP2B-204ENST00000612199 TRIM21P19474 475 aaKnown RBP11.2□□□□□ -0.62
SRGAP2B-204ENST00000612199 ANAPC15P60006 121 aa11.2□□□□□ -0.62
SRGAP2B-204ENST00000612199 TEX35Q5T0J7 233 aa11.2□□□□□ -0.62
SRGAP2B-204ENST00000612199 KIF6Q6ZMV9 814 aa11.2□□□□□ -0.62
SRGAP2B-204ENST00000612199 CCDC173Q0VFZ6 552 aa11.2□□□□□ -0.62
SRGAP2B-204ENST00000612199 ZNF771Q7L3S4 317 aaPredicted RBP11.2□□□□□ -0.62
SRGAP2B-204ENST00000612199 SRGAP3O43295 1099 aa11.2□□□□□ -0.62
SRGAP2B-204ENST00000612199 SASS6Q6UVJ0 657 aa11.2□□□□□ -0.62
SRGAP2B-204ENST00000612199 SAFBQ15424 915 aaKnown RBP eCLIP11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 ARL1P40616 181 aaPredicted RBP11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 FAM43AQ8N2R8 423 aa11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 LRRCC1Q9C099 1032 aa11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 HIP1O00291 1037 aa11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 FOXO3O43524 673 aa11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 ATP2B1P20020 1258 aa11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 PDCP20941 246 aa11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 CCT4P50991 539 aaKnown RBP11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 CNNM1Q9NRU3 951 aa11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 STK25O00506 426 aa11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 SH3BP5O60239 455 aa11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 ERC1Q8IUD2 1116 aa11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 KIF14Q15058 1648 aa11.19□□□□□ -0.62
SRGAP2B-204ENST00000612199 TRAK2O60296 914 aa11.18□□□□□ -0.62
SRGAP2B-204ENST00000612199 ADRA2BP18089 450 aa11.18□□□□□ -0.62
SRGAP2B-204ENST00000612199 CCDC191Q8NCU4 936 aa11.18□□□□□ -0.62
SRGAP2B-204ENST00000612199 EXOC6BQ9Y2D4 811 aa11.18□□□□□ -0.62
SRGAP2B-204ENST00000612199 CHD1LQ86WJ1 897 aa11.18□□□□□ -0.62
SRGAP2B-204ENST00000612199 SSH1Q8WYL5 1049 aa11.18□□□□□ -0.62
SRGAP2B-204ENST00000612199 PTCD1O75127 700 aaKnown RBP11.18□□□□□ -0.62
SRGAP2B-204ENST00000612199 THOC2Q8NI27 1593 aaKnown RBP11.17□□□□□ -0.62
SRGAP2B-204ENST00000612199 SERPINA10Q9UK55 444 aa11.17□□□□□ -0.62
SRGAP2B-204ENST00000612199 SPG7Q9UQ90 795 aa11.17□□□□□ -0.62
SRGAP2B-204ENST00000612199 STK3Q13188 491 aa11.17□□□□□ -0.62
SRGAP2B-204ENST00000612199 CDK5RAP3Q96JB5 506 aa11.17□□□□□ -0.62
SRGAP2B-204ENST00000612199 CEBPZQ03701 1054 aaKnown RBP11.17□□□□□ -0.62
SRGAP2B-204ENST00000612199 GPS2Q13227 327 aa11.17□□□□□ -0.62
SRGAP2B-204ENST00000612199 CAVIN1Q6NZI2 390 aaKnown RBP11.17□□□□□ -0.62
SRGAP2B-204ENST00000612199 ACRBPQ8NEB7 543 aa11.17□□□□□ -0.62
SRGAP2B-204ENST00000612199 AMOTL2Q9Y2J4 779 aa11.17□□□□□ -0.62
SRGAP2B-204ENST00000612199 NASPP49321 788 aaPredicted RBP11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 MAP3K1Q13233 1512 aa11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 GNAT3A8MTJ3 354 aa11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 DUSP27Q5VZP5 1158 aa11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 PRPF40AO75400 957 aaKnown RBP11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 ANKRD18AQ8IVF6 992 aa11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 TBC1D2BQ9UPU7 963 aa11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 TRMT1LQ7Z2T5 733 aaKnown RBP11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 NOS1P29475 1434 aa11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 FIBPO43427 364 aa11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 RPAP2Q8IXW5 612 aaPredicted RBP11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 SSX2IPQ9Y2D8 614 aa11.16□□□□□ -0.62
SRGAP2B-204ENST00000612199 F6X3S4 739 aa11.15□□□□□ -0.62
SRGAP2B-204ENST00000612199 LIG1P18858 919 aa11.15□□□□□ -0.62
SRGAP2B-204ENST00000612199 AACSQ86V21 672 aa11.15□□□□□ -0.62
SRGAP2B-204ENST00000612199 SPINK5Q9NQ38 1064 aaPredicted RBP11.15□□□□□ -0.62
SRGAP2B-204ENST00000612199 DISP3Q9P2K9 1392 aa11.15□□□□□ -0.62
SRGAP2B-204ENST00000612199 LETM1O95202 739 aaPredicted RBP11.15□□□□□ -0.62
SRGAP2B-204ENST00000612199 CAGE1Q8TC20 777 aa11.15□□□□□ -0.62
SRGAP2B-204ENST00000612199 RARSP54136 660 aaKnown RBP11.15□□□□□ -0.62
SRGAP2B-204ENST00000612199 FKBP4Q02790 459 aaKnown RBP eCLIP11.15□□□□□ -0.62
SRGAP2B-204ENST00000612199 PTPRKQ15262 1439 aa11.15□□□□□ -0.62
SRGAP2B-204ENST00000612199 DESP17661 470 aa11.15□□□□□ -0.62
SRGAP2B-204ENST00000612199 SMARCA5O60264 1052 aaPredicted RBP11.15□□□□□ -0.63
SRGAP2B-204ENST00000612199 TTC39AQ5SRH9 613 aa11.15□□□□□ -0.63
SRGAP2B-204ENST00000612199 NUTM1Q86Y26 1132 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms