RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 RAB15P59190 212 aa8.61□□□□□ -1.03
LSM1P2-201ENST00000604911 VWA5B2Q8N398 1253 aa8.61□□□□□ -1.03
LSM1P2-201ENST00000604911 ADAMTS8Q9UP79 889 aa8.61□□□□□ -1.03
LSM1P2-201ENST00000604911 SV2AQ7L0J3 742 aa8.6□□□□□ -1.03
LSM1P2-201ENST00000604911 GJD4Q96KN9 370 aaPredicted RBP8.6□□□□□ -1.03
LSM1P2-201ENST00000604911 CDK11AQ9UQ88 783 aaPredicted RBP8.6□□□□□ -1.03
LSM1P2-201ENST00000604911 TMEM259Q4ZIN3 620 aa8.59□□□□□ -1.03
LSM1P2-201ENST00000604911 CDC14CA4D256 554 aa8.58□□□□□ -1.04
LSM1P2-201ENST00000604911 ARHGEF15O94989 841 aa8.58□□□□□ -1.04
LSM1P2-201ENST00000604911 WHAMMQ8TF30 809 aa8.58□□□□□ -1.04
LSM1P2-201ENST00000604911 RNF144AP50876 292 aaPredicted RBP8.57□□□□□ -1.04
LSM1P2-201ENST00000604911 ERICH6BQ5W0A0 696 aa8.57□□□□□ -1.04
LSM1P2-201ENST00000604911 CYLDQ9NQC7 956 aa8.57□□□□□ -1.04
LSM1P2-201ENST00000604911 ZBBXA8MT70 800 aa8.56□□□□□ -1.04
LSM1P2-201ENST00000604911 LYSMD3Q7Z3D4 306 aa8.56□□□□□ -1.04
LSM1P2-201ENST00000604911 PCMTD1Q96MG8 357 aaPredicted RBP8.56□□□□□ -1.04
LSM1P2-201ENST00000604911 CUEDC1Q9NWM3 386 aaPredicted RBP8.56□□□□□ -1.04
LSM1P2-201ENST00000604911 GIGYF1O75420 1035 aaPredicted RBP8.55□□□□□ -1.04
LSM1P2-201ENST00000604911 FBXO45P0C2W1 286 aa8.55□□□□□ -1.04
LSM1P2-201ENST00000604911 BRD2P25440 801 aaKnown RBP8.55□□□□□ -1.04
LSM1P2-201ENST00000604911 RASSF7Q02833 373 aa8.55□□□□□ -1.04
LSM1P2-201ENST00000604911 SVOPQ8N4V2 548 aa8.55□□□□□ -1.04
LSM1P2-201ENST00000604911 KCTD17Q8N5Z5 321 aa8.55□□□□□ -1.04
LSM1P2-201ENST00000604911 LOC100996750A0A140TA64 210 aa8.54□□□□□ -1.04
LSM1P2-201ENST00000604911 RNF225M0QZC1 329 aaPredicted RBP8.54□□□□□ -1.04
LSM1P2-201ENST00000604911 GAS6Q14393 721 aa8.54□□□□□ -1.04
LSM1P2-201ENST00000604911 TMEM151AQ8N4L1 468 aa8.54□□□□□ -1.04
LSM1P2-201ENST00000604911 KRTAP4-6Q9BYQ5 205 aa8.54□□□□□ -1.04
LSM1P2-201ENST00000604911 ATP5J2-PTCD1G3V325 749 aa8.53□□□□□ -1.04
LSM1P2-201ENST00000604911 GDF11O95390 407 aa8.53□□□□□ -1.04
LSM1P2-201ENST00000604911 GPC1P35052 558 aa8.53□□□□□ -1.04
LSM1P2-201ENST00000604911 ERVK-9P63128 1117 aa8.53□□□□□ -1.04
LSM1P2-201ENST00000604911 CCDC125Q86Z20 511 aa8.53□□□□□ -1.04
LSM1P2-201ENST00000604911 TRIM52Q96A61 297 aa8.53□□□□□ -1.04
LSM1P2-201ENST00000604911 GPR37L1O60883 481 aa8.52□□□□□ -1.05
LSM1P2-201ENST00000604911 PRICKLE2Q7Z3G6 844 aa8.52□□□□□ -1.05
LSM1P2-201ENST00000604911 PCDHB9Q9Y5E1 797 aa8.52□□□□□ -1.05
LSM1P2-201ENST00000604911 ADAMTS2O95450 1211 aa8.51□□□□□ -1.05
LSM1P2-201ENST00000604911 SRSF11Q05519 484 aaKnown RBP8.51□□□□□ -1.05
LSM1P2-201ENST00000604911 SOCS7O14512 581 aa8.5□□□□□ -1.05
LSM1P2-201ENST00000604911 RHOQP17081 205 aa8.5□□□□□ -1.05
LSM1P2-201ENST00000604911 CC2D2BQ6DHV5 1058 aa8.5□□□□□ -1.05
LSM1P2-201ENST00000604911 LYPD4Q6UWN0 246 aa8.5□□□□□ -1.05
LSM1P2-201ENST00000604911 ZNF837Q96EG3 531 aaPredicted RBP8.5□□□□□ -1.05
LSM1P2-201ENST00000604911 GMCL1Q96IK5 515 aa8.5□□□□□ -1.05
LSM1P2-201ENST00000604911 A0A1W2PRU2 124 aa8.49□□□□□ -1.05
LSM1P2-201ENST00000604911 ZNF326Q5BKZ1 582 aaKnown RBP8.49□□□□□ -1.05
LSM1P2-201ENST00000604911 TRIM22Q8IYM9 498 aa8.49□□□□□ -1.05
LSM1P2-201ENST00000604911 SCTRP47872 440 aa8.48□□□□□ -1.05
LSM1P2-201ENST00000604911 MCCD1P59942 119 aaPredicted RBP8.48□□□□□ -1.05
LSM1P2-201ENST00000604911 FGD1P98174 961 aa8.48□□□□□ -1.05
LSM1P2-201ENST00000604911 NR1H3Q13133 447 aa8.48□□□□□ -1.05
LSM1P2-201ENST00000604911 SUZ12Q15022 739 aaKnown RBP8.48□□□□□ -1.05
LSM1P2-201ENST00000604911 RNF20Q5VTR2 975 aa8.48□□□□□ -1.05
LSM1P2-201ENST00000604911 IL27Q8NEV9 243 aa8.48□□□□□ -1.05
LSM1P2-201ENST00000604911 MEN1O00255 615 aa8.47□□□□□ -1.05
LSM1P2-201ENST00000604911 TRAK2O60296 914 aa8.47□□□□□ -1.05
LSM1P2-201ENST00000604911 CDK11BP21127 795 aaKnown RBP8.47□□□□□ -1.05
LSM1P2-201ENST00000604911 DBN1Q16643 649 aa8.47□□□□□ -1.05
LSM1P2-201ENST00000604911 GRIP2Q9C0E4 1043 aa8.47□□□□□ -1.05
LSM1P2-201ENST00000604911 DYRK1BQ9Y463 629 aa8.47□□□□□ -1.05
LSM1P2-201ENST00000604911 CELA2BP08218 269 aaPredicted RBP8.46□□□□□ -1.06
LSM1P2-201ENST00000604911 HMGB1P09429 215 aaKnown RBP8.46□□□□□ -1.06
LSM1P2-201ENST00000604911 CLN3Q13286 438 aa8.46□□□□□ -1.06
LSM1P2-201ENST00000604911 NEUROD2Q15784 382 aa8.46□□□□□ -1.06
LSM1P2-201ENST00000604911 BANK1Q8NDB2 785 aa8.46□□□□□ -1.06
LSM1P2-201ENST00000604911 CHMP4AQ9BY43 222 aa8.46□□□□□ -1.06
LSM1P2-201ENST00000604911 OSBPL3Q9H4L5 887 aa8.46□□□□□ -1.06
LSM1P2-201ENST00000604911 ACIN1Q9UKV3 1341 aaKnown RBP8.46□□□□□ -1.06
LSM1P2-201ENST00000604911 SPATA31C2B4DYI2 1134 aa8.45□□□□□ -1.06
LSM1P2-201ENST00000604911 IRS1P35568 1242 aa8.45□□□□□ -1.06
LSM1P2-201ENST00000604911 TMEM132AQ24JP5 1023 aa8.45□□□□□ -1.06
LSM1P2-201ENST00000604911 MTMR14Q8NCE2 650 aa8.45□□□□□ -1.06
LSM1P2-201ENST00000604911 MBIPQ9NS73 344 aa8.45□□□□□ -1.06
LSM1P2-201ENST00000604911 DNMT3AQ9Y6K1 912 aaPredicted RBP8.45□□□□□ -1.06
LSM1P2-201ENST00000604911 POU4F2Q12837 409 aa8.44□□□□□ -1.06
LSM1P2-201ENST00000604911 WDR44Q5JSH3 913 aa8.44□□□□□ -1.06
LSM1P2-201ENST00000604911 KANK3Q6NY19 840 aa8.44□□□□□ -1.06
LSM1P2-201ENST00000604911 CYP2U1Q7Z449 544 aa8.44□□□□□ -1.06
LSM1P2-201ENST00000604911 HSP90B1P14625 803 aaKnown RBP8.43□□□□□ -1.06
LSM1P2-201ENST00000604911 MARSP56192 900 aaKnown RBP8.43□□□□□ -1.06
LSM1P2-201ENST00000604911 NBPF10Q6P3W6 841 aaKnown RBP8.43□□□□□ -1.06
LSM1P2-201ENST00000604911 NBPF15Q8N660 670 aa8.43□□□□□ -1.06
LSM1P2-201ENST00000604911 ZNF592Q92610 1267 aa8.43□□□□□ -1.06
LSM1P2-201ENST00000604911 SCARF2Q96GP6 870 aaPredicted RBP8.43□□□□□ -1.06
LSM1P2-201ENST00000604911 PCDHB11Q9Y5F2 797 aa8.43□□□□□ -1.06
LSM1P2-201ENST00000604911 GPR25O00155 361 aa8.42□□□□□ -1.06
LSM1P2-201ENST00000604911 BRPF1P55201 1214 aaPredicted RBP8.42□□□□□ -1.06
LSM1P2-201ENST00000604911 MAP3K10Q02779 954 aa8.42□□□□□ -1.06
LSM1P2-201ENST00000604911 SLC27A3Q5K4L6 730 aa8.42□□□□□ -1.06
LSM1P2-201ENST00000604911 NLRP3Q96P20 1036 aa8.42□□□□□ -1.06
LSM1P2-201ENST00000604911 IGF1RP08069 1367 aa8.42□□□□□ -1.06
LSM1P2-201ENST00000604911 H7C1W4 665 aa8.41□□□□□ -1.06
LSM1P2-201ENST00000604911 RIPOR1Q6ZS17 1223 aa8.41□□□□□ -1.06
LSM1P2-201ENST00000604911 ARHGEF10LQ9HCE6 1279 aa8.41□□□□□ -1.06
LSM1P2-201ENST00000604911 ZNF330Q9Y3S2 320 aaPredicted RBP8.41□□□□□ -1.06
LSM1P2-201ENST00000604911 NDUFB9Q9Y6M9 179 aa8.41□□□□□ -1.06
LSM1P2-201ENST00000604911 LOC105371045A0A1W2PR82 267 aa8.4□□□□□ -1.06
LSM1P2-201ENST00000604911 FOXR1Q6PIV2 292 aa8.4□□□□□ -1.06
LSM1P2-201ENST00000604911 GTPBP3Q969Y2 492 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms