RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 DACH1Q9UI36 760 aa17.19■□□□□ 0.34
SYMPK-215ENST00000600237 CCDC66A2RUB6 948 aa17.19■□□□□ 0.34
SYMPK-215ENST00000600237 ME1P48163 572 aa17.19■□□□□ 0.34
SYMPK-215ENST00000600237 NACAP1Q9BZK3 213 aa17.19■□□□□ 0.34
SYMPK-215ENST00000600237 CFAP45Q9UL16 551 aa17.19■□□□□ 0.34
SYMPK-215ENST00000600237 RARSP54136 660 aaKnown RBP17.18■□□□□ 0.34
SYMPK-215ENST00000600237 CNNM1Q9NRU3 951 aa17.18■□□□□ 0.34
SYMPK-215ENST00000600237 GNL3LQ9NVN8 582 aaKnown RBP17.18■□□□□ 0.34
SYMPK-215ENST00000600237 MAGEC2Q9UBF1 373 aaPredicted RBP17.18■□□□□ 0.34
SYMPK-215ENST00000600237 CEBPZQ03701 1054 aaKnown RBP17.18■□□□□ 0.34
SYMPK-215ENST00000600237 ZSCAN25Q6NSZ9 544 aa17.18■□□□□ 0.34
SYMPK-215ENST00000600237 SPC24Q8NBT2 197 aa17.17■□□□□ 0.34
SYMPK-215ENST00000600237 PDRG1Q9NUG6 133 aa17.17■□□□□ 0.34
SYMPK-215ENST00000600237 CTNNA3Q9UI47 895 aa17.17■□□□□ 0.34
SYMPK-215ENST00000600237 NKTRP30414 1462 aaKnown RBP17.17■□□□□ 0.34
SYMPK-215ENST00000600237 SERPINC1P01008 464 aa17.17■□□□□ 0.34
SYMPK-215ENST00000600237 CCDC112Q8NEF3 446 aa17.17■□□□□ 0.34
SYMPK-215ENST00000600237 ADGRF5Q8IZF2 1346 aa17.17■□□□□ 0.34
SYMPK-215ENST00000600237 AACSQ86V21 672 aa17.17■□□□□ 0.34
SYMPK-215ENST00000600237 PHF8Q9UPP1 1060 aa17.16■□□□□ 0.34
SYMPK-215ENST00000600237 SPATA32Q96LK8 384 aa17.16■□□□□ 0.34
SYMPK-215ENST00000600237 MYO6Q9UM54 1294 aa17.16■□□□□ 0.34
SYMPK-215ENST00000600237 RRP12Q5JTH9 1297 aaKnown RBP17.16■□□□□ 0.34
SYMPK-215ENST00000600237 SIL1Q9H173 461 aa17.16■□□□□ 0.34
SYMPK-215ENST00000600237 CDKL5O76039 1030 aa17.16■□□□□ 0.34
SYMPK-215ENST00000600237 CEP57L1Q8IYX8 460 aa17.16■□□□□ 0.34
SYMPK-215ENST00000600237 JAKMIP1Q96N16 626 aaKnown RBP17.16■□□□□ 0.34
SYMPK-215ENST00000600237 STK3Q13188 491 aa17.15■□□□□ 0.34
SYMPK-215ENST00000600237 NUP62CLQ9H1M0 184 aa17.15■□□□□ 0.34
SYMPK-215ENST00000600237 ZNHIT6Q9NWK9 470 aaKnown RBP17.15■□□□□ 0.34
SYMPK-215ENST00000600237 CDK5RAP3Q96JB5 506 aa17.15■□□□□ 0.34
SYMPK-215ENST00000600237 BTBD11A6QL63 1104 aa17.15■□□□□ 0.34
SYMPK-215ENST00000600237 WASLO00401 505 aaPredicted RBP17.15■□□□□ 0.34
SYMPK-215ENST00000600237 UNC13AQ9UPW8 1703 aa17.15■□□□□ 0.34
SYMPK-215ENST00000600237 CBFA2T2O43439 604 aa17.14■□□□□ 0.33
SYMPK-215ENST00000600237 ODF2Q5BJF6 829 aa17.14■□□□□ 0.33
SYMPK-215ENST00000600237 C11orf95C9JLR9 678 aaPredicted RBP17.14■□□□□ 0.33
SYMPK-215ENST00000600237 FAM135AQ9P2D6 1515 aa17.14■□□□□ 0.33
SYMPK-215ENST00000600237 SSH1Q8WYL5 1049 aa17.14■□□□□ 0.33
SYMPK-215ENST00000600237 KIF1BPQ96EK5 621 aa17.14■□□□□ 0.33
SYMPK-215ENST00000600237 DCTN1Q14203 1278 aa17.14■□□□□ 0.33
SYMPK-215ENST00000600237 IL1RAPL2Q9NP60 686 aa17.14■□□□□ 0.33
SYMPK-215ENST00000600237 CCDC57Q2TAC2 916 aa17.13■□□□□ 0.33
SYMPK-215ENST00000600237 CEP126Q9P2H0 1117 aa17.13■□□□□ 0.33
SYMPK-215ENST00000600237 TTLL5Q6EMB2 1281 aa17.13■□□□□ 0.33
SYMPK-215ENST00000600237 PPFIBP1Q86W92 1011 aa17.13■□□□□ 0.33
SYMPK-215ENST00000600237 GNAT3A8MTJ3 354 aa17.13■□□□□ 0.33
SYMPK-215ENST00000600237 GLRX3O76003 335 aaKnown RBP17.13■□□□□ 0.33
SYMPK-215ENST00000600237 HMGB2P26583 209 aaKnown RBP17.13■□□□□ 0.33
SYMPK-215ENST00000600237 STIM1Q13586 685 aa17.13■□□□□ 0.33
SYMPK-215ENST00000600237 CWC27Q6UX04 472 aaKnown RBP17.13■□□□□ 0.33
SYMPK-215ENST00000600237 LRPPRCP42704 1394 aaKnown RBP17.13■□□□□ 0.33
SYMPK-215ENST00000600237 ZSCAN30Q86W11 494 aa17.13■□□□□ 0.33
SYMPK-215ENST00000600237 CCAR1Q8IX12 1150 aaKnown RBP17.13■□□□□ 0.33
SYMPK-215ENST00000600237 LUC7LQ9NQ29 371 aaKnown RBP17.12■□□□□ 0.33
SYMPK-215ENST00000600237 RAB11FIP3O75154 756 aa17.12■□□□□ 0.33
SYMPK-215ENST00000600237 MYL6BP14649 208 aa17.12■□□□□ 0.33
SYMPK-215ENST00000600237 GPATCH8Q9UKJ3 1502 aaKnown RBP17.12■□□□□ 0.33
SYMPK-215ENST00000600237 KDM4AO75164 1064 aa17.12■□□□□ 0.33
SYMPK-215ENST00000600237 DMRT2Q9Y5R5 561 aa17.12■□□□□ 0.33
SYMPK-215ENST00000600237 BRPF1P55201 1214 aaPredicted RBP17.11■□□□□ 0.33
SYMPK-215ENST00000600237 ANO8Q9HCE9 1232 aaPredicted RBP17.11■□□□□ 0.33
SYMPK-215ENST00000600237 MTMR7Q9Y216 660 aa17.11■□□□□ 0.33
SYMPK-215ENST00000600237 MAP4K4O95819 1239 aaPredicted RBP17.11■□□□□ 0.33
SYMPK-215ENST00000600237 MX1P20591 662 aa17.11■□□□□ 0.33
SYMPK-215ENST00000600237 PLCH2O75038 1416 aa17.11■□□□□ 0.33
SYMPK-215ENST00000600237 ASXL2Q76L83 1435 aa17.11■□□□□ 0.33
SYMPK-215ENST00000600237 CCDC69A6NI79 296 aa17.11■□□□□ 0.33
SYMPK-215ENST00000600237 PATL2C9JE40 543 aaKnown RBP17.11■□□□□ 0.33
SYMPK-215ENST00000600237 FOXO3O43524 673 aa17.11■□□□□ 0.33
SYMPK-215ENST00000600237 RDXP35241 583 aaKnown RBP17.11■□□□□ 0.33
SYMPK-215ENST00000600237 NOL7Q9UMY1 257 aaKnown RBP17.11■□□□□ 0.33
SYMPK-215ENST00000600237 EXOC6BQ9Y2D4 811 aa17.11■□□□□ 0.33
SYMPK-215ENST00000600237 NOS1P29475 1434 aa17.1■□□□□ 0.33
SYMPK-215ENST00000600237 TEX14Q8IWB6 1497 aa17.1■□□□□ 0.33
SYMPK-215ENST00000600237 TXLNBQ8N3L3 684 aa17.1■□□□□ 0.33
SYMPK-215ENST00000600237 IKQ13123 557 aaPredicted RBP17.1■□□□□ 0.33
SYMPK-215ENST00000600237 DUSP27Q5VZP5 1158 aa17.1■□□□□ 0.33
SYMPK-215ENST00000600237 BCL11BQ9C0K0 894 aaPredicted RBP17.1■□□□□ 0.33
SYMPK-215ENST00000600237 C14orf93Q9H972 538 aaKnown RBP17.1■□□□□ 0.33
SYMPK-215ENST00000600237 ATP10BO94823 1461 aa17.1■□□□□ 0.33
SYMPK-215ENST00000600237 MAP3K11Q16584 847 aa17.1■□□□□ 0.33
SYMPK-215ENST00000600237 C20orf194Q5TEA3 1177 aa17.1■□□□□ 0.33
SYMPK-215ENST00000600237 NME9Q86XW9 330 aa17.1■□□□□ 0.33
SYMPK-215ENST00000600237 THOC2Q8NI27 1593 aaKnown RBP17.09■□□□□ 0.33
SYMPK-215ENST00000600237 TNRQ92752 1358 aa17.09■□□□□ 0.33
SYMPK-215ENST00000600237 PLEKHH1Q9ULM0 1364 aa17.09■□□□□ 0.33
SYMPK-215ENST00000600237 RBM10P98175 930 aaKnown RBP17.08■□□□□ 0.33
SYMPK-215ENST00000600237 UPF3BQ9BZI7 483 aaKnown RBP17.08■□□□□ 0.33
SYMPK-215ENST00000600237 RPRD2Q5VT52 1461 aaKnown RBP17.08■□□□□ 0.33
SYMPK-215ENST00000600237 H0YHG0 523 aa17.08■□□□□ 0.32
SYMPK-215ENST00000600237 AMOTQ4VCS5 1084 aa17.08■□□□□ 0.32
SYMPK-215ENST00000600237 MPHOSPH8Q99549 860 aa17.08■□□□□ 0.32
SYMPK-215ENST00000600237 SMTNL1A8MU46 457 aa17.08■□□□□ 0.32
SYMPK-215ENST00000600237 ERLIN1O75477 346 aa17.08■□□□□ 0.32
SYMPK-215ENST00000600237 CASTP20810 708 aaKnown RBP17.08■□□□□ 0.32
SYMPK-215ENST00000600237 LEKR1Q6ZMV7 388 aa17.08■□□□□ 0.32
SYMPK-215ENST00000600237 KDM5BQ9UGL1 1544 aa17.07■□□□□ 0.32
SYMPK-215ENST00000600237 HSP90AB2PQ58FF8 381 aa17.07■□□□□ 0.32
SYMPK-215ENST00000600237 SH2B1Q9NRF2 756 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms