RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 RFX1P22670 979 aa4.31□□□□□ -1.72
PTP4A1-204ENST00000578299 SCTRP47872 440 aa4.31□□□□□ -1.72
PTP4A1-204ENST00000578299 SMCPP49901 116 aaPredicted RBP4.31□□□□□ -1.72
PTP4A1-204ENST00000578299 ATP1A2P50993 1020 aa4.31□□□□□ -1.72
PTP4A1-204ENST00000578299 CTC1Q2NKJ3 1217 aa4.31□□□□□ -1.72
PTP4A1-204ENST00000578299 KANK4Q5T7N3 995 aaPredicted RBP4.31□□□□□ -1.72
PTP4A1-204ENST00000578299 Q6ZVU0 165 aa4.31□□□□□ -1.72
PTP4A1-204ENST00000578299 PBXIP1Q96AQ6 731 aa4.31□□□□□ -1.72
PTP4A1-204ENST00000578299 ZFAND3Q9H8U3 227 aa4.31□□□□□ -1.72
PTP4A1-204ENST00000578299 MKRN1Q9UHC7 482 aaKnown RBP4.31□□□□□ -1.72
PTP4A1-204ENST00000578299 CAPN5O15484 640 aaPredicted RBP4.3□□□□□ -1.72
PTP4A1-204ENST00000578299 RASA1P20936 1047 aa4.3□□□□□ -1.72
PTP4A1-204ENST00000578299 ADD1P35611 737 aaKnown RBP4.3□□□□□ -1.72
PTP4A1-204ENST00000578299 SRPK2P78362 688 aaKnown RBP4.3□□□□□ -1.72
PTP4A1-204ENST00000578299 LARP1Q6PKG0 1096 aaKnown RBP4.3□□□□□ -1.72
PTP4A1-204ENST00000578299 CYP2U1Q7Z449 544 aa4.3□□□□□ -1.72
PTP4A1-204ENST00000578299 CRIPAKQ8N1N5 446 aa4.3□□□□□ -1.72
PTP4A1-204ENST00000578299 OSBPL3Q9H4L5 887 aa4.3□□□□□ -1.72
PTP4A1-204ENST00000578299 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.29□□□□□ -1.72
PTP4A1-204ENST00000578299 FAM196BA6NMK8 535 aa4.29□□□□□ -1.72
PTP4A1-204ENST00000578299 UPP2O95045 317 aa4.29□□□□□ -1.72
PTP4A1-204ENST00000578299 GNRH1P01148 92 aa4.29□□□□□ -1.72
PTP4A1-204ENST00000578299 ADH1AP07327 375 aa4.29□□□□□ -1.72
PTP4A1-204ENST00000578299 GTF2IP78347 998 aa4.29□□□□□ -1.72
PTP4A1-204ENST00000578299 CBLBQ13191 982 aa4.29□□□□□ -1.72
PTP4A1-204ENST00000578299 LARGE2Q8N3Y3 721 aa4.29□□□□□ -1.72
PTP4A1-204ENST00000578299 OGFOD1Q8N543 542 aa4.29□□□□□ -1.72
PTP4A1-204ENST00000578299 MEIOBQ8N635 442 aa4.29□□□□□ -1.72
PTP4A1-204ENST00000578299 TSEN34Q9BSV6 310 aaKnown RBP4.29□□□□□ -1.72
PTP4A1-204ENST00000578299 DNAAF2Q9NVR5 837 aaKnown RBP4.29□□□□□ -1.72
PTP4A1-204ENST00000578299 PCDHGA11Q9Y5H2 935 aa4.29□□□□□ -1.72
PTP4A1-204ENST00000578299 ACIN1Q9UKV3 1341 aaKnown RBP4.28□□□□□ -1.72
PTP4A1-204ENST00000578299 USP17L15C9J2P7 530 aa4.28□□□□□ -1.72
PTP4A1-204ENST00000578299 USP17L10C9JJH3 530 aa4.28□□□□□ -1.72
PTP4A1-204ENST00000578299 USP17L13C9JLJ4 530 aa4.28□□□□□ -1.72
PTP4A1-204ENST00000578299 USP17L12C9JPN9 530 aa4.28□□□□□ -1.72
PTP4A1-204ENST00000578299 USP17L11C9JVI0 530 aa4.28□□□□□ -1.72
PTP4A1-204ENST00000578299 USP17L21D6R901 530 aa4.28□□□□□ -1.72
PTP4A1-204ENST00000578299 USP17L18D6R9N7 530 aa4.28□□□□□ -1.72
PTP4A1-204ENST00000578299 USP17L22D6RA61 530 aa4.28□□□□□ -1.72
PTP4A1-204ENST00000578299 USP17L17D6RBQ6 530 aa4.28□□□□□ -1.72
PTP4A1-204ENST00000578299 USP17L19D6RCP7 530 aa4.28□□□□□ -1.72
PTP4A1-204ENST00000578299 USP17L20D6RJB6 530 aa4.28□□□□□ -1.72
PTP4A1-204ENST00000578299 AXIN1O15169 862 aa4.28□□□□□ -1.72
PTP4A1-204ENST00000578299 ATG7O95352 703 aa4.28□□□□□ -1.72
PTP4A1-204ENST00000578299 PTGIRP43119 386 aa4.28□□□□□ -1.72
PTP4A1-204ENST00000578299 CLDN10P78369 228 aa4.28□□□□□ -1.72
PTP4A1-204ENST00000578299 PSME1Q06323 249 aa4.28□□□□□ -1.72
PTP4A1-204ENST00000578299 USP17L24Q0WX57 530 aa4.28□□□□□ -1.72
PTP4A1-204ENST00000578299 ELOAQ14241 798 aaKnown RBP4.28□□□□□ -1.72
PTP4A1-204ENST00000578299 ESCO1Q5FWF5 840 aa4.28□□□□□ -1.72
PTP4A1-204ENST00000578299 SIX5Q8N196 739 aa4.28□□□□□ -1.72
PTP4A1-204ENST00000578299 RBM19Q9Y4C8 960 aaKnown RBP4.28□□□□□ -1.72
PTP4A1-204ENST00000578299 ZBTB7BO15156 539 aaPredicted RBP4.27□□□□□ -1.73
PTP4A1-204ENST00000578299 RELBQ01201 579 aa4.27□□□□□ -1.73
PTP4A1-204ENST00000578299 PTK7Q13308 1070 aa4.27□□□□□ -1.73
PTP4A1-204ENST00000578299 CRTC2Q53ET0 693 aaPredicted RBP4.27□□□□□ -1.73
PTP4A1-204ENST00000578299 CDCA8Q53HL2 280 aa4.27□□□□□ -1.73
PTP4A1-204ENST00000578299 CCDC102BQ68D86 513 aa4.27□□□□□ -1.73
PTP4A1-204ENST00000578299 MRPL14Q6P1L8 145 aaKnown RBP4.27□□□□□ -1.73
PTP4A1-204ENST00000578299 KDF1Q8NAX2 398 aaPredicted RBP4.27□□□□□ -1.73
PTP4A1-204ENST00000578299 TPCN2Q8NHX9 752 aa4.27□□□□□ -1.73
PTP4A1-204ENST00000578299 ZNF594Q96JF6 807 aaPredicted RBP4.27□□□□□ -1.73
PTP4A1-204ENST00000578299 AGBL1Q96MI9 1066 aa4.27□□□□□ -1.73
PTP4A1-204ENST00000578299 A0A1W2PRU2 124 aa4.26□□□□□ -1.73
PTP4A1-204ENST00000578299 WASLO00401 505 aaPredicted RBP4.26□□□□□ -1.73
PTP4A1-204ENST00000578299 INHAP05111 366 aa4.26□□□□□ -1.73
PTP4A1-204ENST00000578299 SCNN1DP51172 638 aa4.26□□□□□ -1.73
PTP4A1-204ENST00000578299 GDF10P55107 478 aa4.26□□□□□ -1.73
PTP4A1-204ENST00000578299 SCARF1Q14162 830 aa4.26□□□□□ -1.73
PTP4A1-204ENST00000578299 Q6ZNB5 142 aa4.26□□□□□ -1.73
PTP4A1-204ENST00000578299 ANKMY2Q8IV38 441 aa4.26□□□□□ -1.73
PTP4A1-204ENST00000578299 LINC00528Q8N1L1 170 aa4.26□□□□□ -1.73
PTP4A1-204ENST00000578299 XAGE2Q96GT9 111 aa4.26□□□□□ -1.73
PTP4A1-204ENST00000578299 ARHGEF10LQ9HCE6 1279 aa4.26□□□□□ -1.73
PTP4A1-204ENST00000578299 AAASQ9NRG9 546 aa4.26□□□□□ -1.73
PTP4A1-204ENST00000578299 NOVA2Q9UNW9 492 aaKnown RBP4.26□□□□□ -1.73
PTP4A1-204ENST00000578299 KIAA1024Q9UPX6 916 aa4.26□□□□□ -1.73
PTP4A1-204ENST00000578299 M0R2N6 131 aa4.25□□□□□ -1.73
PTP4A1-204ENST00000578299 BACH1O14867 736 aa4.25□□□□□ -1.73
PTP4A1-204ENST00000578299 ST8SIA5O15466 376 aa4.25□□□□□ -1.73
PTP4A1-204ENST00000578299 SPINT1O43278 529 aa4.25□□□□□ -1.73
PTP4A1-204ENST00000578299 DKK1O94907 266 aa4.25□□□□□ -1.73
PTP4A1-204ENST00000578299 CSB-PGBD3P0DP91 1061 aa4.25□□□□□ -1.73
PTP4A1-204ENST00000578299 BMP2P12643 396 aa4.25□□□□□ -1.73
PTP4A1-204ENST00000578299 BMP1P13497 986 aa4.25□□□□□ -1.73
PTP4A1-204ENST00000578299 SEC13P55735 322 aa4.25□□□□□ -1.73
PTP4A1-204ENST00000578299 DPYDQ12882 1025 aa4.25□□□□□ -1.73
PTP4A1-204ENST00000578299 CLN3Q13286 438 aa4.25□□□□□ -1.73
PTP4A1-204ENST00000578299 FAM200AQ8TCP9 573 aa4.25□□□□□ -1.73
PTP4A1-204ENST00000578299 NLRP3Q96P20 1036 aa4.25□□□□□ -1.73
PTP4A1-204ENST00000578299 SLC4A9Q96Q91 983 aa4.25□□□□□ -1.73
PTP4A1-204ENST00000578299 ARXQ96QS3 562 aa4.25□□□□□ -1.73
PTP4A1-204ENST00000578299 ESYT1Q9BSJ8 1104 aa4.25□□□□□ -1.73
PTP4A1-204ENST00000578299 ZNF395Q9H8N7 513 aaPredicted RBP4.25□□□□□ -1.73
PTP4A1-204ENST00000578299 ETNK1Q9HBU6 452 aa4.25□□□□□ -1.73
PTP4A1-204ENST00000578299 ZNF358Q9NW07 568 aa4.25□□□□□ -1.73
PTP4A1-204ENST00000578299 TMEM229AB2RXF0 380 aa4.24□□□□□ -1.73
PTP4A1-204ENST00000578299 MEN1O00255 615 aa4.24□□□□□ -1.73
PTP4A1-204ENST00000578299 IL2RAP01589 272 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms