RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 SOCS7O14512 581 aa9.1□□□□□ -0.95
KARSP3-201ENST00000571212 LORP23490 312 aaPredicted RBP9.1□□□□□ -0.95
KARSP3-201ENST00000571212 BAZ1BQ9UIG0 1483 aaKnown RBP9.09□□□□□ -0.95
KARSP3-201ENST00000571212 PEG3Q9GZU2 1588 aa9.09□□□□□ -0.95
KARSP3-201ENST00000571212 RNF217Q8TC41 542 aa9.09□□□□□ -0.95
KARSP3-201ENST00000571212 VSIG8P0DPA2 414 aa9.08□□□□□ -0.96
KARSP3-201ENST00000571212 SCTRP47872 440 aa9.08□□□□□ -0.96
KARSP3-201ENST00000571212 FOXD4L5Q5VV16 416 aaPredicted RBP9.08□□□□□ -0.96
KARSP3-201ENST00000571212 GPR161Q8N6U8 529 aaKnown RBP9.08□□□□□ -0.96
KARSP3-201ENST00000571212 CCDC155Q8N6L0 562 aa9.07□□□□□ -0.96
KARSP3-201ENST00000571212 IRF5Q13568 498 aa9.06□□□□□ -0.96
KARSP3-201ENST00000571212 PCDHB11Q9Y5F2 797 aa9.06□□□□□ -0.96
KARSP3-201ENST00000571212 THOC2Q8NI27 1593 aaKnown RBP9.06□□□□□ -0.96
KARSP3-201ENST00000571212 LAMC3Q9Y6N6 1575 aa9.06□□□□□ -0.96
KARSP3-201ENST00000571212 SLC35F4A4IF30 521 aa9.05□□□□□ -0.96
KARSP3-201ENST00000571212 ATP5J2-PTCD1G3V325 749 aa9.05□□□□□ -0.96
KARSP3-201ENST00000571212 APBB1O00213 710 aa9.05□□□□□ -0.96
KARSP3-201ENST00000571212 STK17AQ9UEE5 414 aa9.05□□□□□ -0.96
KARSP3-201ENST00000571212 ERVK-9P63128 1117 aa9.05□□□□□ -0.96
KARSP3-201ENST00000571212 CC2D2BQ6DHV5 1058 aa9.05□□□□□ -0.96
KARSP3-201ENST00000571212 GDPD2Q9HCC8 539 aa9.05□□□□□ -0.96
KARSP3-201ENST00000571212 ZNF330Q9Y3S2 320 aaPredicted RBP9.05□□□□□ -0.96
KARSP3-201ENST00000571212 SENP3-EIF4A1A0A087X0R7 540 aa9.04□□□□□ -0.96
KARSP3-201ENST00000571212 MEN1O00255 615 aa9.04□□□□□ -0.96
KARSP3-201ENST00000571212 RNF20Q5VTR2 975 aa9.04□□□□□ -0.96
KARSP3-201ENST00000571212 PRICKLE2Q7Z3G6 844 aa9.04□□□□□ -0.96
KARSP3-201ENST00000571212 ZSCAN1Q8NBB4 408 aa9.04□□□□□ -0.96
KARSP3-201ENST00000571212 CEP126Q9P2H0 1117 aa9.04□□□□□ -0.96
KARSP3-201ENST00000571212 MCCD1P59942 119 aaPredicted RBP9.03□□□□□ -0.96
KARSP3-201ENST00000571212 TSGA10IPQ3SY00 556 aa9.03□□□□□ -0.96
KARSP3-201ENST00000571212 CCDC85AQ96PX6 553 aaPredicted RBP9.03□□□□□ -0.96
KARSP3-201ENST00000571212 CDCA7Q9BWT1 371 aaPredicted RBP9.03□□□□□ -0.96
KARSP3-201ENST00000571212 A0A1W2PRU2 124 aa9.02□□□□□ -0.97
KARSP3-201ENST00000571212 RHOQP17081 205 aa9.02□□□□□ -0.97
KARSP3-201ENST00000571212 VAC14Q08AM6 782 aa9.02□□□□□ -0.97
KARSP3-201ENST00000571212 OSBPL3Q9H4L5 887 aa9.02□□□□□ -0.97
KARSP3-201ENST00000571212 KIF21AQ7Z4S6 1674 aa9.02□□□□□ -0.97
KARSP3-201ENST00000571212 ABL2P42684 1182 aa9.01□□□□□ -0.97
KARSP3-201ENST00000571212 KRT76Q01546 638 aa9.01□□□□□ -0.97
KARSP3-201ENST00000571212 VWA5B2Q8N398 1253 aa9.01□□□□□ -0.97
KARSP3-201ENST00000571212 MROH2BQ7Z745 1585 aa9.01□□□□□ -0.97
KARSP3-201ENST00000571212 PDS5BQ9NTI5 1447 aa9.01□□□□□ -0.97
KARSP3-201ENST00000571212 ITGA6P23229 1130 aa9□□□□□ -0.97
KARSP3-201ENST00000571212 RNF144AP50876 292 aaPredicted RBP9□□□□□ -0.97
KARSP3-201ENST00000571212 LYSMD3Q7Z3D4 306 aa9□□□□□ -0.97
KARSP3-201ENST00000571212 CDC14CA4D256 554 aa9□□□□□ -0.97
KARSP3-201ENST00000571212 TRAK2O60296 914 aa8.99□□□□□ -0.97
KARSP3-201ENST00000571212 MCM6Q14566 821 aa8.99□□□□□ -0.97
KARSP3-201ENST00000571212 CNTNAP3BQ96NU0 1288 aa8.99□□□□□ -0.97
KARSP3-201ENST00000571212 CNTNAP3Q9BZ76 1288 aa8.99□□□□□ -0.97
KARSP3-201ENST00000571212 PRM3Q9NNZ6 103 aa8.99□□□□□ -0.97
KARSP3-201ENST00000571212 RAB6BQ9NRW1 208 aa8.99□□□□□ -0.97
KARSP3-201ENST00000571212 CUEDC1Q9NWM3 386 aaPredicted RBP8.99□□□□□ -0.97
KARSP3-201ENST00000571212 CCDC125Q86Z20 511 aa8.98□□□□□ -0.97
KARSP3-201ENST00000571212 NANOS1Q8WY41 292 aaKnown RBP8.98□□□□□ -0.97
KARSP3-201ENST00000571212 ZNF592Q92610 1267 aa8.98□□□□□ -0.97
KARSP3-201ENST00000571212 COL25A1Q9BXS0 654 aaPredicted RBP8.98□□□□□ -0.97
KARSP3-201ENST00000571212 ARHGEF10LQ9HCE6 1279 aa8.98□□□□□ -0.97
KARSP3-201ENST00000571212 RNFT1Q5M7Z0 435 aa8.97□□□□□ -0.97
KARSP3-201ENST00000571212 CYP2U1Q7Z449 544 aa8.97□□□□□ -0.97
KARSP3-201ENST00000571212 EIF4G2P78344 907 aaKnown RBP eCLIP8.96□□□□□ -0.97
KARSP3-201ENST00000571212 POU4F2Q12837 409 aa8.96□□□□□ -0.97
KARSP3-201ENST00000571212 PHTF2Q8N3S3 785 aa8.96□□□□□ -0.97
KARSP3-201ENST00000571212 TRIM52Q96A61 297 aa8.96□□□□□ -0.97
KARSP3-201ENST00000571212 ESF1Q9H501 851 aaKnown RBP8.96□□□□□ -0.97
KARSP3-201ENST00000571212 STAU1O95793 577 aaKnown RBP8.95□□□□□ -0.98
KARSP3-201ENST00000571212 CLN3Q13286 438 aa8.95□□□□□ -0.98
KARSP3-201ENST00000571212 SLC27A3Q5K4L6 730 aa8.95□□□□□ -0.98
KARSP3-201ENST00000571212 NLRP3Q96P20 1036 aa8.95□□□□□ -0.98
KARSP3-201ENST00000571212 CADPSQ9ULU8 1353 aa8.95□□□□□ -0.98
KARSP3-201ENST00000571212 SV2AQ7L0J3 742 aa8.95□□□□□ -0.98
KARSP3-201ENST00000571212 GPC1P35052 558 aa8.94□□□□□ -0.98
KARSP3-201ENST00000571212 SLFNL1Q499Z3 407 aa8.94□□□□□ -0.98
KARSP3-201ENST00000571212 GRIP2Q9C0E4 1043 aa8.94□□□□□ -0.98
KARSP3-201ENST00000571212 MRC2Q9UBG0 1479 aa8.93□□□□□ -0.98
KARSP3-201ENST00000571212 IL2RAP01589 272 aa8.93□□□□□ -0.98
KARSP3-201ENST00000571212 RNF135Q8IUD6 432 aa8.93□□□□□ -0.98
KARSP3-201ENST00000571212 COG6Q9Y2V7 657 aa8.93□□□□□ -0.98
KARSP3-201ENST00000571212 MYCP01106 439 aaPredicted RBP8.92□□□□□ -0.98
KARSP3-201ENST00000571212 CNKSR1Q969H4 720 aa8.92□□□□□ -0.98
KARSP3-201ENST00000571212 POM121Q96HA1 1249 aa8.92□□□□□ -0.98
KARSP3-201ENST00000571212 DOLKQ9UPQ8 538 aa8.92□□□□□ -0.98
KARSP3-201ENST00000571212 WDR62O43379 1518 aa8.92□□□□□ -0.98
KARSP3-201ENST00000571212 FAM181BA6NEQ2 426 aa8.91□□□□□ -0.98
KARSP3-201ENST00000571212 GNRH1P01148 92 aa8.91□□□□□ -0.98
KARSP3-201ENST00000571212 OXLD1Q5BKU9 147 aa8.91□□□□□ -0.98
KARSP3-201ENST00000571212 CENPCQ03188 943 aa8.9□□□□□ -0.98
KARSP3-201ENST00000571212 DBN1Q16643 649 aa8.9□□□□□ -0.98
KARSP3-201ENST00000571212 NBPF10Q6P3W6 841 aaKnown RBP8.9□□□□□ -0.98
KARSP3-201ENST00000571212 RIPOR1Q6ZS17 1223 aa8.9□□□□□ -0.98
KARSP3-201ENST00000571212 NBPF15Q8N660 670 aa8.9□□□□□ -0.98
KARSP3-201ENST00000571212 GAS2L1Q99501 681 aaPredicted RBP8.9□□□□□ -0.98
KARSP3-201ENST00000571212 ESYT1Q9BSJ8 1104 aa8.9□□□□□ -0.98
KARSP3-201ENST00000571212 WIZO95785 1651 aa8.9□□□□□ -0.98
KARSP3-201ENST00000571212 WASHC4Q2M389 1173 aa8.9□□□□□ -0.99
KARSP3-201ENST00000571212 GPR25O00155 361 aa8.89□□□□□ -0.99
KARSP3-201ENST00000571212 SEMA3FQ13275 785 aa8.89□□□□□ -0.99
KARSP3-201ENST00000571212 WHAMMQ8TF30 809 aa8.89□□□□□ -0.99
KARSP3-201ENST00000571212 PIK3CDO00329 1044 aa8.88□□□□□ -0.99
KARSP3-201ENST00000571212 PHKA2P46019 1235 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms