RNA–Protein interactions for RNA: ENST00000556184.5

SRSF5-212, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 2,443 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-212ENST00000556184 COL3A1P02461 1466 aaPredicted RBP12.98□□□□□ -0.33
SRSF5-212ENST00000556184 PTCH1Q13635 1447 aa12.98□□□□□ -0.33
SRSF5-212ENST00000556184 ZC3H13Q5T200 1668 aaKnown RBP12.98□□□□□ -0.33
SRSF5-212ENST00000556184 ADGRB1O14514 1584 aa12.98□□□□□ -0.33
SRSF5-212ENST00000556184 MBD3O95983 291 aa12.98□□□□□ -0.33
SRSF5-212ENST00000556184 DCAF8Q5TAQ9 597 aa12.98□□□□□ -0.33
SRSF5-212ENST00000556184 USP26Q9BXU7 913 aa12.98□□□□□ -0.33
SRSF5-212ENST00000556184 ATP7AQ04656 1500 aa12.98□□□□□ -0.33
SRSF5-212ENST00000556184 LMTK2Q8IWU2 1503 aa12.98□□□□□ -0.33
SRSF5-212ENST00000556184 BARGINQ6ZT62 677 aa12.98□□□□□ -0.33
SRSF5-212ENST00000556184 RGS22Q8NE09 1264 aa12.98□□□□□ -0.33
SRSF5-212ENST00000556184 PNPLA6Q8IY17 1366 aa12.97□□□□□ -0.33
SRSF5-212ENST00000556184 EVC2Q86UK5 1308 aa12.97□□□□□ -0.33
SRSF5-212ENST00000556184 PRIMPOLQ96LW4 560 aa12.97□□□□□ -0.33
SRSF5-212ENST00000556184 CCDC94Q9BW85 323 aaPredicted RBP12.97□□□□□ -0.33
SRSF5-212ENST00000556184 GLI2P10070 1586 aa12.97□□□□□ -0.33
SRSF5-212ENST00000556184 ABCA9Q8IUA7 1624 aa12.97□□□□□ -0.33
SRSF5-212ENST00000556184 XPCQ01831 940 aaPredicted RBP12.97□□□□□ -0.33
SRSF5-212ENST00000556184 ST18O60284 1047 aa12.96□□□□□ -0.33
SRSF5-212ENST00000556184 GTF2F1P35269 517 aaKnown RBP eCLIP12.96□□□□□ -0.334e-70■■■■□ 21.7
SRSF5-212ENST00000556184 ADGRB3O60242 1522 aa12.96□□□□□ -0.33
SRSF5-212ENST00000556184 HMGN5P82970 282 aaKnown RBP12.96□□□□□ -0.34
SRSF5-212ENST00000556184 GPT2Q8TD30 523 aa12.96□□□□□ -0.34
SRSF5-212ENST00000556184 ARHGEF1Q92888 912 aaKnown RBP12.96□□□□□ -0.34
SRSF5-212ENST00000556184 PPRC1Q5VV67 1664 aaKnown RBP12.96□□□□□ -0.34
SRSF5-212ENST00000556184 ABCC4O15439 1325 aa12.95□□□□□ -0.34
SRSF5-212ENST00000556184 FCHSD2O94868 740 aa12.95□□□□□ -0.34
SRSF5-212ENST00000556184 RBM26Q5T8P6 1007 aaKnown RBP12.95□□□□□ -0.34
SRSF5-212ENST00000556184 INTS3Q68E01 1043 aaKnown RBP12.95□□□□□ -0.34
SRSF5-212ENST00000556184 SIRT2Q8IXJ6 389 aa12.95□□□□□ -0.34
SRSF5-212ENST00000556184 MYRIPQ8NFW9 859 aa12.95□□□□□ -0.34
SRSF5-212ENST00000556184 KIF1BO60333 1816 aa12.95□□□□□ -0.34
SRSF5-212ENST00000556184 EFCAB6Q5THR3 1501 aa12.95□□□□□ -0.34
SRSF5-212ENST00000556184 UVSSAQ2YD98 709 aa12.94□□□□□ -0.34
SRSF5-212ENST00000556184 PLEKHM2Q8IWE5 1019 aa12.94□□□□□ -0.34
SRSF5-212ENST00000556184 MRPL50Q8N5N7 158 aaKnown RBP12.94□□□□□ -0.34
SRSF5-212ENST00000556184 DCTPP1Q9H773 170 aa12.94□□□□□ -0.34
SRSF5-212ENST00000556184 SSUH2Q9Y2M2 353 aa12.94□□□□□ -0.34
SRSF5-212ENST00000556184 PRPF40AO75400 957 aaKnown RBP12.94□□□□□ -0.34
SRSF5-212ENST00000556184 GGT6Q6P531 493 aa12.94□□□□□ -0.34
SRSF5-212ENST00000556184 QRICH2Q9H0J4 1663 aa12.94□□□□□ -0.34
SRSF5-212ENST00000556184 GSPT1P15170 499 aaKnown RBP12.93□□□□□ -0.34
SRSF5-212ENST00000556184 NCLP19338 710 aaKnown RBP12.93□□□□□ -0.34
SRSF5-212ENST00000556184 MCM2P49736 904 aa12.93□□□□□ -0.34
SRSF5-212ENST00000556184 DMTNQ08495 405 aa12.93□□□□□ -0.34
SRSF5-212ENST00000556184 TTC22Q5TAA0 569 aa12.93□□□□□ -0.34
SRSF5-212ENST00000556184 TRAK1Q9UPV9 953 aa12.93□□□□□ -0.34
SRSF5-212ENST00000556184 VAMP4O75379 141 aa12.93□□□□□ -0.34
SRSF5-212ENST00000556184 KIAA2012Q0VF49 1180 aa12.93□□□□□ -0.34
SRSF5-212ENST00000556184 FAM184AQ8NB25 1140 aa12.93□□□□□ -0.34
SRSF5-212ENST00000556184 ZDHHC9Q9Y397 364 aa12.93□□□□□ -0.34
SRSF5-212ENST00000556184 GTPBP4Q9BZE4 634 aaKnown RBP12.92□□□□□ -0.34
SRSF5-212ENST00000556184 TMEM63CQ9P1W3 806 aa12.92□□□□□ -0.34
SRSF5-212ENST00000556184 MROH1Q8NDA8 1641 aa12.92□□□□□ -0.34
SRSF5-212ENST00000556184 CASC1Q6TDU7 716 aa12.92□□□□□ -0.34
SRSF5-212ENST00000556184 SYAP1Q96A49 352 aaPredicted RBP12.92□□□□□ -0.34
SRSF5-212ENST00000556184 UGGT1Q9NYU2 1555 aa12.92□□□□□ -0.34
SRSF5-212ENST00000556184 CDC42BPGQ6DT37 1551 aa12.91□□□□□ -0.34
SRSF5-212ENST00000556184 API5Q9BZZ5 524 aaKnown RBP12.91□□□□□ -0.34
SRSF5-212ENST00000556184 U2SURPO15042 1029 aaKnown RBP12.91□□□□□ -0.34
SRSF5-212ENST00000556184 CAPN15O75808 1086 aa12.91□□□□□ -0.34
SRSF5-212ENST00000556184 REC8O95072 547 aa12.91□□□□□ -0.34
SRSF5-212ENST00000556184 MLECQ14165 292 aa12.91□□□□□ -0.34
SRSF5-212ENST00000556184 DIAPH1O60610 1272 aaKnown RBP12.9□□□□□ -0.34
SRSF5-212ENST00000556184 PHF14O94880 888 aa12.9□□□□□ -0.34
SRSF5-212ENST00000556184 PIBF1Q8WXW3 757 aa12.9□□□□□ -0.34
SRSF5-212ENST00000556184 INTS4Q96HW7 963 aaKnown RBP12.9□□□□□ -0.34
SRSF5-212ENST00000556184 IFT57Q9NWB7 429 aa12.9□□□□□ -0.34
SRSF5-212ENST00000556184 PLEKHG3A1L390 1219 aa12.89□□□□□ -0.35
SRSF5-212ENST00000556184 KIF20AO95235 890 aa12.89□□□□□ -0.35
SRSF5-212ENST00000556184 ZSCAN20P17040 1043 aaPredicted RBP12.89□□□□□ -0.35
SRSF5-212ENST00000556184 PKP1Q13835 747 aa12.89□□□□□ -0.35
SRSF5-212ENST00000556184 E2F4Q16254 413 aa12.89□□□□□ -0.35
SRSF5-212ENST00000556184 IL17RAQ96F46 866 aa12.89□□□□□ -0.35
SRSF5-212ENST00000556184 TSPY26PQ9H489 355 aa12.89□□□□□ -0.35
SRSF5-212ENST00000556184 TULP4Q9NRJ4 1543 aa12.89□□□□□ -0.35
SRSF5-212ENST00000556184 SYCE3A1L190 88 aa12.89□□□□□ -0.35
SRSF5-212ENST00000556184 BRD1O95696 1058 aa12.89□□□□□ -0.35
SRSF5-212ENST00000556184 ZNF853P0CG23 659 aa12.89□□□□□ -0.35
SRSF5-212ENST00000556184 PDE4DQ08499 809 aa12.89□□□□□ -0.35
SRSF5-212ENST00000556184 ZFYVE9O95405 1425 aa12.89□□□□□ -0.35
SRSF5-212ENST00000556184 GNAI1P63096 354 aa12.88□□□□□ -0.35
SRSF5-212ENST00000556184 CUL4AQ13619 759 aa12.88□□□□□ -0.35
SRSF5-212ENST00000556184 RPAP2Q8IXW5 612 aaPredicted RBP12.88□□□□□ -0.35
SRSF5-212ENST00000556184 AK7Q96M32 723 aa12.88□□□□□ -0.35
SRSF5-212ENST00000556184 SPTLC3Q9NUV7 552 aa12.88□□□□□ -0.35
SRSF5-212ENST00000556184 RBM27Q9P2N5 1060 aaKnown RBP12.88□□□□□ -0.35
SRSF5-212ENST00000556184 MROH2AA6NES4 1674 aa12.87□□□□□ -0.35
SRSF5-212ENST00000556184 ONECUT3O60422 494 aaPredicted RBP12.87□□□□□ -0.35
SRSF5-212ENST00000556184 PYGBP11216 843 aa12.87□□□□□ -0.35
SRSF5-212ENST00000556184 KIDINS220Q9ULH0 1771 aa12.87□□□□□ -0.35
SRSF5-212ENST00000556184 FAM135BQ49AJ0 1406 aa12.87□□□□□ -0.35
SRSF5-212ENST00000556184 A0A1W2PP64 1363 aa12.87□□□□□ -0.35
SRSF5-212ENST00000556184 FYB1O15117 783 aa12.87□□□□□ -0.35
SRSF5-212ENST00000556184 PPP1R37O75864 691 aa12.87□□□□□ -0.35
SRSF5-212ENST00000556184 LETM1O95202 739 aaPredicted RBP12.87□□□□□ -0.35
SRSF5-212ENST00000556184 ZGPATQ8N5A5 531 aaKnown RBP12.87□□□□□ -0.35
SRSF5-212ENST00000556184 ATAD2Q6PL18 1390 aa12.86□□□□□ -0.35
SRSF5-212ENST00000556184 ANKRD44Q8N8A2 993 aa12.86□□□□□ -0.35
SRSF5-212ENST00000556184 OSBPL3Q9H4L5 887 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms