RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 BLMP54132 1417 aaPredicted RBP12.24□□□□□ -0.45
CHD8-210ENST00000555962 EVA1CP58658 441 aa12.24□□□□□ -0.45
CHD8-210ENST00000555962 SPATA31A1Q5TZJ5 1347 aa12.24□□□□□ -0.45
CHD8-210ENST00000555962 AKT1S1Q96B36 256 aa12.24□□□□□ -0.45
CHD8-210ENST00000555962 FAM212AQ96EL1 285 aa12.24□□□□□ -0.45
CHD8-210ENST00000555962 RBM42Q9BTD8 480 aaKnown RBP12.24□□□□□ -0.45
CHD8-210ENST00000555962 CDK12Q9NYV4 1490 aaPredicted RBP12.24□□□□□ -0.45
CHD8-210ENST00000555962 POLKQ9UBT6 870 aa12.24□□□□□ -0.45
CHD8-210ENST00000555962 THSD7AQ9UPZ6 1657 aa12.24□□□□□ -0.45
CHD8-210ENST00000555962 CLEC11AQ9Y240 323 aa12.24□□□□□ -0.45
CHD8-210ENST00000555962 CRB1P82279 1406 aa12.23□□□□□ -0.45
CHD8-210ENST00000555962 SMG6Q86US8 1419 aaKnown RBP12.23□□□□□ -0.45
CHD8-210ENST00000555962 ERBB3P21860 1342 aa12.23□□□□□ -0.45
CHD8-210ENST00000555962 WDR17Q8IZU2 1322 aa12.23□□□□□ -0.45
CHD8-210ENST00000555962 AMPHP49418 695 aa12.23□□□□□ -0.45
CHD8-210ENST00000555962 FLT4P35916 1363 aa12.22□□□□□ -0.45
CHD8-210ENST00000555962 KIF24Q5T7B8 1368 aa12.22□□□□□ -0.45
CHD8-210ENST00000555962 PRR29P0C7W0 189 aa12.22□□□□□ -0.45
CHD8-210ENST00000555962 HSP90AB2PQ58FF8 381 aa12.22□□□□□ -0.45
CHD8-210ENST00000555962 ANKRD24Q8TF21 1146 aa12.22□□□□□ -0.45
CHD8-210ENST00000555962 PARP4Q9UKK3 1724 aaKnown RBP12.22□□□□□ -0.45
CHD8-210ENST00000555962 CSB-PGBD3P0DP91 1061 aa12.21□□□□□ -0.45
CHD8-210ENST00000555962 NBR1Q14596 966 aa12.21□□□□□ -0.45
CHD8-210ENST00000555962 NKX1-1Q15270 411 aaPredicted RBP12.21□□□□□ -0.45
CHD8-210ENST00000555962 LTV1Q96GA3 475 aaPredicted RBP12.21□□□□□ -0.45
CHD8-210ENST00000555962 CREBZFQ9NS37 354 aa12.21□□□□□ -0.45
CHD8-210ENST00000555962 USP35Q9P2H5 1018 aa12.21□□□□□ -0.45
CHD8-210ENST00000555962 INSRP06213 1382 aa12.2□□□□□ -0.46
CHD8-210ENST00000555962 PPM1GO15355 546 aaPredicted RBP12.2□□□□□ -0.46
CHD8-210ENST00000555962 ONECUT3O60422 494 aaPredicted RBP12.2□□□□□ -0.46
CHD8-210ENST00000555962 FAM98CQ17RN3 349 aaKnown RBP12.2□□□□□ -0.46
CHD8-210ENST00000555962 TOM1L2Q6ZVM7 507 aa12.2□□□□□ -0.46
CHD8-210ENST00000555962 LRRC37A3O60309 1634 aa12.19□□□□□ -0.46
CHD8-210ENST00000555962 CARD10Q9BWT7 1032 aa12.19□□□□□ -0.46
CHD8-210ENST00000555962 RGPD1P0DJD0 1748 aa12.18□□□□□ -0.46
CHD8-210ENST00000555962 STK25O00506 426 aa12.18□□□□□ -0.46
CHD8-210ENST00000555962 SEPT12Q8IYM1 358 aa12.18□□□□□ -0.46
CHD8-210ENST00000555962 TCP11L2Q8N4U5 519 aa12.18□□□□□ -0.46
CHD8-210ENST00000555962 NLRP2Q9NX02 1062 aa12.18□□□□□ -0.46
CHD8-210ENST00000555962 SHANK3Q9BYB0 1731 aa12.17□□□□□ -0.46
CHD8-210ENST00000555962 NBPF6Q5VWK0 638 aa12.17□□□□□ -0.46
CHD8-210ENST00000555962 BARGINQ6ZT62 677 aa12.17□□□□□ -0.46
CHD8-210ENST00000555962 NBPF4Q96M43 638 aa12.17□□□□□ -0.46
CHD8-210ENST00000555962 DISP2A7MBM2 1401 aa12.17□□□□□ -0.46
CHD8-210ENST00000555962 PARD3Q8TEW0 1356 aa12.17□□□□□ -0.46
CHD8-210ENST00000555962 COL3A1P02461 1466 aaPredicted RBP12.16□□□□□ -0.46
CHD8-210ENST00000555962 MTHFSP49914 203 aa12.16□□□□□ -0.46
CHD8-210ENST00000555962 MNX1P50219 401 aaPredicted RBP12.16□□□□□ -0.46
CHD8-210ENST00000555962 THRAP3Q9Y2W1 955 aaKnown RBP12.16□□□□□ -0.46
CHD8-210ENST00000555962 EP400Q96L91 3159 aa12.16□□□□□ -0.46
CHD8-210ENST00000555962 NCAPD2Q15021 1401 aa12.15□□□□□ -0.46
CHD8-210ENST00000555962 GTPBP6O43824 516 aaPredicted RBP12.15□□□□□ -0.46
CHD8-210ENST00000555962 CHRM1P11229 460 aaPredicted RBP12.15□□□□□ -0.46
CHD8-210ENST00000555962 PPP2R1AP30153 589 aa12.15□□□□□ -0.46
CHD8-210ENST00000555962 EIF4A2Q14240 407 aaKnown RBP12.15□□□□□ -0.46
CHD8-210ENST00000555962 USHBP1Q8N6Y0 703 aa12.15□□□□□ -0.46
CHD8-210ENST00000555962 KAT6BQ8WYB5 2073 aa12.15□□□□□ -0.46
CHD8-210ENST00000555962 SBF2Q86WG5 1849 aa12.14□□□□□ -0.47
CHD8-210ENST00000555962 A0A0G2JS52 829 aa12.14□□□□□ -0.47
CHD8-210ENST00000555962 MYT1Q01538 1121 aa12.14□□□□□ -0.47
CHD8-210ENST00000555962 MEGF6O75095 1541 aa12.13□□□□□ -0.47
CHD8-210ENST00000555962 REM2Q8IYK8 340 aaPredicted RBP12.13□□□□□ -0.47
CHD8-210ENST00000555962 RASEFQ8IZ41 740 aa12.13□□□□□ -0.47
CHD8-210ENST00000555962 EYA1Q99502 592 aa12.13□□□□□ -0.47
CHD8-210ENST00000555962 PKD1L3Q7Z443 1732 aa12.13□□□□□ -0.47
CHD8-210ENST00000555962 IL13P35225 146 aa12.12□□□□□ -0.47
CHD8-210ENST00000555962 IL2RBP14784 551 aa12.11□□□□□ -0.47
CHD8-210ENST00000555962 FAM182BQ5T319 152 aa12.11□□□□□ -0.47
CHD8-210ENST00000555962 KRT27Q7Z3Y8 459 aa12.11□□□□□ -0.47
CHD8-210ENST00000555962 TNS2Q63HR2 1409 aa12.11□□□□□ -0.47
CHD8-210ENST00000555962 IGSF1Q8N6C5 1336 aa12.11□□□□□ -0.47
CHD8-210ENST00000555962 VIRMAQ69YN4 1812 aaKnown RBP12.1□□□□□ -0.47
CHD8-210ENST00000555962 RALBP1Q15311 655 aa12.1□□□□□ -0.47
CHD8-210ENST00000555962 DDB1Q16531 1140 aa12.1□□□□□ -0.47
CHD8-210ENST00000555962 CDCA7Q9BWT1 371 aaPredicted RBP12.1□□□□□ -0.47
CHD8-210ENST00000555962 OVOS2A0A0G2JMS6 1433 aa12.1□□□□□ -0.47
CHD8-210ENST00000555962 PRKRIP1Q9H875 184 aaPredicted RBP12.09□□□□□ -0.47
CHD8-210ENST00000555962 TNS1Q9HBL0 1735 aaKnown RBP12.08□□□□□ -0.47
CHD8-210ENST00000555962 DIAPH1O60610 1272 aaKnown RBP12.08□□□□□ -0.48
CHD8-210ENST00000555962 PDE3BQ13370 1112 aa12.08□□□□□ -0.48
CHD8-210ENST00000555962 AEBP1Q8IUX7 1158 aa12.08□□□□□ -0.48
CHD8-210ENST00000555962 SGIP1Q9BQI5 828 aa12.08□□□□□ -0.48
CHD8-210ENST00000555962 EXOC5O00471 708 aa12.07□□□□□ -0.48
CHD8-210ENST00000555962 MARCH10Q8NA82 808 aaPredicted RBP12.07□□□□□ -0.48
CHD8-210ENST00000555962 DOT1LQ8TEK3 1739 aa12.07□□□□□ -0.48
CHD8-210ENST00000555962 BCL11BQ9C0K0 894 aaPredicted RBP12.07□□□□□ -0.48
CHD8-210ENST00000555962 STK24Q9Y6E0 443 aa12.07□□□□□ -0.48
CHD8-210ENST00000555962 MYBBP1AQ9BQG0 1328 aaKnown RBP12.07□□□□□ -0.48
CHD8-210ENST00000555962 KDRP35968 1356 aa12.06□□□□□ -0.48
CHD8-210ENST00000555962 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.06□□□□□ -0.48
CHD8-210ENST00000555962 SOCS7O14512 581 aa12.06□□□□□ -0.48
CHD8-210ENST00000555962 TATP17735 454 aaPredicted RBP12.06□□□□□ -0.48
CHD8-210ENST00000555962 SULT6B1Q6IMI4 303 aa12.06□□□□□ -0.48
CHD8-210ENST00000555962 RAPGEF4Q8WZA2 1011 aa12.06□□□□□ -0.48
CHD8-210ENST00000555962 ZFP91Q96JP5 570 aaPredicted RBP12.06□□□□□ -0.48
CHD8-210ENST00000555962 CFAP53Q96M91 514 aa12.06□□□□□ -0.48
CHD8-210ENST00000555962 ITGB4P16144 1822 aa12.06□□□□□ -0.48
CHD8-210ENST00000555962 TOGARAM1Q9Y4F4 1720 aa12.06□□□□□ -0.48
CHD8-210ENST00000555962 HMOX1P09601 288 aa12.05□□□□□ -0.48
CHD8-210ENST00000555962 ZCRB1Q8TBF4 217 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 211.1 ms