RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 ZC3H6P61129 1189 aaKnown RBP8.54□□□□□ -1.04
CASC18-202ENST00000548557 HSP90AB2PQ58FF8 381 aa8.54□□□□□ -1.04
CASC18-202ENST00000548557 CERS3Q8IU89 383 aa8.54□□□□□ -1.04
CASC18-202ENST00000548557 KCTD17Q8N5Z5 321 aa8.54□□□□□ -1.04
CASC18-202ENST00000548557 IL13P35225 146 aa8.54□□□□□ -1.04
CASC18-202ENST00000548557 KIAA0232Q92628 1395 aa8.54□□□□□ -1.04
CASC18-202ENST00000548557 HSPA1LP34931 641 aa8.53□□□□□ -1.04
CASC18-202ENST00000548557 ZNF219Q9P2Y4 722 aaPredicted RBP8.53□□□□□ -1.04
CASC18-202ENST00000548557 SPATA31A6Q5VVP1 1343 aa8.53□□□□□ -1.04
CASC18-202ENST00000548557 RBM25P49756 843 aaKnown RBP8.53□□□□□ -1.04
CASC18-202ENST00000548557 EIF4A2Q14240 407 aaKnown RBP8.53□□□□□ -1.04
CASC18-202ENST00000548557 PRDM11Q9NQV5 511 aa8.53□□□□□ -1.04
CASC18-202ENST00000548557 SHPRHQ149N8 1683 aa8.53□□□□□ -1.04
CASC18-202ENST00000548557 PEAK1Q9H792 1746 aa8.52□□□□□ -1.04
CASC18-202ENST00000548557 NCLP19338 710 aaKnown RBP8.52□□□□□ -1.04
CASC18-202ENST00000548557 BRPF1P55201 1214 aaPredicted RBP8.52□□□□□ -1.04
CASC18-202ENST00000548557 PNNQ9H307 717 aaKnown RBP8.52□□□□□ -1.04
CASC18-202ENST00000548557 ADAMTS8Q9UP79 889 aa8.52□□□□□ -1.04
CASC18-202ENST00000548557 LTN1O94822 1766 aa8.52□□□□□ -1.05
CASC18-202ENST00000548557 SENP3-EIF4A1A0A087X0R7 540 aa8.52□□□□□ -1.05
CASC18-202ENST00000548557 U2AF1L5P0DN76 240 aaPredicted RBP8.52□□□□□ -1.05
CASC18-202ENST00000548557 U2AF1Q01081 240 aaKnown RBP eCLIP8.52□□□□□ -1.05
CASC18-202ENST00000548557 SALL2Q9Y467 1007 aaPredicted RBP8.52□□□□□ -1.05
CASC18-202ENST00000548557 ABCA3Q99758 1704 aa8.52□□□□□ -1.05
CASC18-202ENST00000548557 U2SURPO15042 1029 aaKnown RBP8.51□□□□□ -1.05
CASC18-202ENST00000548557 FCHSD2O94868 740 aa8.51□□□□□ -1.05
CASC18-202ENST00000548557 FBXO41Q8TF61 875 aa8.51□□□□□ -1.05
CASC18-202ENST00000548557 AXIN2Q9Y2T1 843 aa8.51□□□□□ -1.05
CASC18-202ENST00000548557 PRDM10Q9NQV6 1147 aa8.51□□□□□ -1.05
CASC18-202ENST00000548557 MTMR7Q9Y216 660 aa8.51□□□□□ -1.05
CASC18-202ENST00000548557 ERBB3P21860 1342 aa8.51□□□□□ -1.05
CASC18-202ENST00000548557 FAM83GA6ND36 823 aa8.5□□□□□ -1.05
CASC18-202ENST00000548557 BBXQ8WY36 941 aaPredicted RBP8.5□□□□□ -1.05
CASC18-202ENST00000548557 CHRNA2Q15822 529 aa8.5□□□□□ -1.05
CASC18-202ENST00000548557 IGSF1Q8N6C5 1336 aa8.5□□□□□ -1.05
CASC18-202ENST00000548557 ANKRD24Q8TF21 1146 aa8.5□□□□□ -1.05
CASC18-202ENST00000548557 ZMYND15Q9H091 742 aa8.5□□□□□ -1.05
CASC18-202ENST00000548557 USP35Q9P2H5 1018 aa8.5□□□□□ -1.05
CASC18-202ENST00000548557 COL18A1P39060 1754 aa8.49□□□□□ -1.05
CASC18-202ENST00000548557 EYA1Q99502 592 aa8.49□□□□□ -1.05
CASC18-202ENST00000548557 PDE3BQ13370 1112 aa8.49□□□□□ -1.05
CASC18-202ENST00000548557 FOXD4L5Q5VV16 416 aaPredicted RBP8.49□□□□□ -1.05
CASC18-202ENST00000548557 FAM177A1Q8N128 213 aaPredicted RBP8.49□□□□□ -1.05
CASC18-202ENST00000548557 RGS22Q8NE09 1264 aa8.49□□□□□ -1.05
CASC18-202ENST00000548557 FOXD4L4Q8WXT5 416 aaPredicted RBP8.49□□□□□ -1.05
CASC18-202ENST00000548557 RUNDC1Q96C34 613 aa8.49□□□□□ -1.05
CASC18-202ENST00000548557 KDRP35968 1356 aa8.48□□□□□ -1.05
CASC18-202ENST00000548557 NUTM2BA6NNL0 878 aaPredicted RBP8.48□□□□□ -1.05
CASC18-202ENST00000548557 NUTM2EB1AL46 878 aaPredicted RBP8.48□□□□□ -1.05
CASC18-202ENST00000548557 NEFMP07197 916 aa8.48□□□□□ -1.05
CASC18-202ENST00000548557 NUTM2AQ8IVF1 878 aaPredicted RBP8.48□□□□□ -1.05
CASC18-202ENST00000548557 NGEFQ8N5V2 710 aa8.48□□□□□ -1.05
CASC18-202ENST00000548557 ZNF526Q8TF50 670 aaPredicted RBP8.48□□□□□ -1.05
CASC18-202ENST00000548557 LTV1Q96GA3 475 aaPredicted RBP8.48□□□□□ -1.05
CASC18-202ENST00000548557 SPINK5Q9NQ38 1064 aaPredicted RBP8.48□□□□□ -1.05
CASC18-202ENST00000548557 LMO7Q8WWI1 1683 aa8.48□□□□□ -1.05
CASC18-202ENST00000548557 COL14A1Q05707 1796 aaKnown RBP8.48□□□□□ -1.05
CASC18-202ENST00000548557 CAMTA1Q9Y6Y1 1673 aa8.48□□□□□ -1.05
CASC18-202ENST00000548557 WDR17Q8IZU2 1322 aa8.48□□□□□ -1.05
CASC18-202ENST00000548557 ADAMTS2O95450 1211 aa8.48□□□□□ -1.05
CASC18-202ENST00000548557 SULT6B1Q6IMI4 303 aa8.48□□□□□ -1.05
CASC18-202ENST00000548557 CSB-PGBD3P0DP91 1061 aa8.47□□□□□ -1.05
CASC18-202ENST00000548557 RRP1P56182 461 aaKnown RBP8.47□□□□□ -1.05
CASC18-202ENST00000548557 EVA1CP58658 441 aa8.47□□□□□ -1.05
CASC18-202ENST00000548557 NBPF6Q5VWK0 638 aa8.47□□□□□ -1.05
CASC18-202ENST00000548557 NBPF4Q96M43 638 aa8.47□□□□□ -1.05
CASC18-202ENST00000548557 PLEKHF1Q96S99 279 aa8.47□□□□□ -1.05
CASC18-202ENST00000548557 BTG4Q9NY30 223 aa8.47□□□□□ -1.05
CASC18-202ENST00000548557 RGPD1P0DJD0 1748 aa8.47□□□□□ -1.05
CASC18-202ENST00000548557 COL5A2P05997 1499 aaPredicted RBP8.47□□□□□ -1.05
CASC18-202ENST00000548557 NCAPD2Q15021 1401 aa8.47□□□□□ -1.05
CASC18-202ENST00000548557 PLEKHG2Q9H7P9 1386 aa8.47□□□□□ -1.05
CASC18-202ENST00000548557 MAPK8IP3Q9UPT6 1336 aa8.46□□□□□ -1.05
CASC18-202ENST00000548557 HMOX1P09601 288 aa8.46□□□□□ -1.05
CASC18-202ENST00000548557 PRKAR2BP31323 418 aa8.46□□□□□ -1.05
CASC18-202ENST00000548557 CNPY4Q8N129 248 aa8.46□□□□□ -1.05
CASC18-202ENST00000548557 RCAN3Q9UKA8 241 aa8.46□□□□□ -1.05
CASC18-202ENST00000548557 FAM208AQ9UK61 1670 aaKnown RBP8.46□□□□□ -1.06
CASC18-202ENST00000548557 NLRP2Q9NX02 1062 aa8.46□□□□□ -1.06
CASC18-202ENST00000548557 SLIT2O94813 1529 aa8.46□□□□□ -1.06
CASC18-202ENST00000548557 CAPN15O75808 1086 aa8.45□□□□□ -1.06
CASC18-202ENST00000548557 TOM1L2Q6ZVM7 507 aa8.45□□□□□ -1.06
CASC18-202ENST00000548557 CCDC146Q8IYE0 955 aa8.45□□□□□ -1.06
CASC18-202ENST00000548557 FNBP4Q8N3X1 1017 aaPredicted RBP8.45□□□□□ -1.06
CASC18-202ENST00000548557 CARD10Q9BWT7 1032 aa8.45□□□□□ -1.06
CASC18-202ENST00000548557 PRDM16Q9HAZ2 1276 aa8.45□□□□□ -1.06
CASC18-202ENST00000548557 CRB1P82279 1406 aa8.45□□□□□ -1.06
CASC18-202ENST00000548557 AEBP1Q8IUX7 1158 aa8.45□□□□□ -1.06
CASC18-202ENST00000548557 TCP11L2Q8N4U5 519 aa8.45□□□□□ -1.06
CASC18-202ENST00000548557 NGLY1Q96IV0 654 aa8.45□□□□□ -1.06
CASC18-202ENST00000548557 STRN4Q9NRL3 753 aa8.45□□□□□ -1.06
CASC18-202ENST00000548557 RGPD5Q99666 1765 aa8.44□□□□□ -1.06
CASC18-202ENST00000548557 LRP6O75581 1613 aa8.44□□□□□ -1.06
CASC18-202ENST00000548557 APAF1O14727 1248 aa8.44□□□□□ -1.06
CASC18-202ENST00000548557 MEX3CQ5U5Q3 659 aaKnown RBP8.44□□□□□ -1.06
CASC18-202ENST00000548557 C8orf37Q96NL8 207 aa8.44□□□□□ -1.06
CASC18-202ENST00000548557 DEKP35659 375 aaKnown RBP8.44□□□□□ -1.06
CASC18-202ENST00000548557 GLIPR1L2Q4G1C9 344 aa8.44□□□□□ -1.06
CASC18-202ENST00000548557 CC2D2BQ6DHV5 1058 aa8.44□□□□□ -1.06
CASC18-202ENST00000548557 LARP1Q6PKG0 1096 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms