RNA–Protein interactions for RNA: ENST00000544658.5

CDK2AP1-206, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 2 BASIC

Gene CDK2AP1, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-206ENST00000544658 GLI3P10071 1580 aa12.72□□□□□ -0.37
CDK2AP1-206ENST00000544658 C19orf67A6NJJ6 358 aa12.71□□□□□ -0.37
CDK2AP1-206ENST00000544658 EVA1CP58658 441 aa12.71□□□□□ -0.37
CDK2AP1-206ENST00000544658 ATRNO75882 1429 aa12.71□□□□□ -0.38
CDK2AP1-206ENST00000544658 SPATA31A5Q5VU36 1347 aa12.7□□□□□ -0.38
CDK2AP1-206ENST00000544658 SPATA31A7Q8IWB4 1347 aa12.7□□□□□ -0.38
CDK2AP1-206ENST00000544658 SENP3-EIF4A1A0A087X0R7 540 aa12.7□□□□□ -0.38
CDK2AP1-206ENST00000544658 HMOX1P09601 288 aa12.7□□□□□ -0.38
CDK2AP1-206ENST00000544658 CSB-PGBD3P0DP91 1061 aa12.7□□□□□ -0.38
CDK2AP1-206ENST00000544658 PNISRQ8TF01 805 aaKnown RBP12.7□□□□□ -0.38
CDK2AP1-206ENST00000544658 MRS2Q9HD23 443 aa12.7□□□□□ -0.38
CDK2AP1-206ENST00000544658 NLRP2Q9NX02 1062 aa12.7□□□□□ -0.38
CDK2AP1-206ENST00000544658 USP35Q9P2H5 1018 aa12.7□□□□□ -0.38
CDK2AP1-206ENST00000544658 NCAPD2Q15021 1401 aa12.7□□□□□ -0.38
CDK2AP1-206ENST00000544658 SPATA31A1Q5TZJ5 1347 aa12.69□□□□□ -0.38
CDK2AP1-206ENST00000544658 IGSF1Q8N6C5 1336 aa12.69□□□□□ -0.38
CDK2AP1-206ENST00000544658 SOCS7O14512 581 aa12.69□□□□□ -0.38
CDK2AP1-206ENST00000544658 U2SURPO15042 1029 aaKnown RBP12.69□□□□□ -0.38
CDK2AP1-206ENST00000544658 VPS72Q15906 364 aa12.69□□□□□ -0.38
CDK2AP1-206ENST00000544658 TOM1L2Q6ZVM7 507 aa12.69□□□□□ -0.38
CDK2AP1-206ENST00000544658 QTRT2Q9H974 415 aaKnown RBP12.69□□□□□ -0.38
CDK2AP1-206ENST00000544658 WNK3Q9BYP7 1800 aa12.68□□□□□ -0.38
CDK2AP1-206ENST00000544658 SULT6B1Q6IMI4 303 aa12.68□□□□□ -0.38
CDK2AP1-206ENST00000544658 CARD10Q9BWT7 1032 aa12.68□□□□□ -0.38
CDK2AP1-206ENST00000544658 ADAMTS8Q9UP79 889 aa12.68□□□□□ -0.38
CDK2AP1-206ENST00000544658 CRB1P82279 1406 aa12.68□□□□□ -0.38
CDK2AP1-206ENST00000544658 MEGF6O75095 1541 aa12.67□□□□□ -0.38
CDK2AP1-206ENST00000544658 CCER2I3L3R5 266 aa12.67□□□□□ -0.38
CDK2AP1-206ENST00000544658 CFAP53Q96M91 514 aa12.67□□□□□ -0.38
CDK2AP1-206ENST00000544658 DISP2A7MBM2 1401 aa12.66□□□□□ -0.38
CDK2AP1-206ENST00000544658 U2AF1L5P0DN76 240 aaPredicted RBP12.66□□□□□ -0.38
CDK2AP1-206ENST00000544658 U2AF1Q01081 240 aaKnown RBP eCLIP12.66□□□□□ -0.38
CDK2AP1-206ENST00000544658 GJD4Q96KN9 370 aaPredicted RBP12.66□□□□□ -0.38
CDK2AP1-206ENST00000544658 PHACTR3Q96KR7 559 aa12.66□□□□□ -0.38
CDK2AP1-206ENST00000544658 RSPH6AQ9H0K4 717 aa12.66□□□□□ -0.38
CDK2AP1-206ENST00000544658 CCDC9Q9Y3X0 531 aaKnown RBP12.66□□□□□ -0.38
CDK2AP1-206ENST00000544658 SHANK3Q9BYB0 1731 aa12.65□□□□□ -0.38
CDK2AP1-206ENST00000544658 PRR29P0C7W0 189 aa12.65□□□□□ -0.38
CDK2AP1-206ENST00000544658 FAM98CQ17RN3 349 aaKnown RBP12.65□□□□□ -0.38
CDK2AP1-206ENST00000544658 CCDC146Q8IYE0 955 aa12.65□□□□□ -0.38
CDK2AP1-206ENST00000544658 TRPC5Q9UL62 973 aaPredicted RBP12.65□□□□□ -0.38
CDK2AP1-206ENST00000544658 KDRP35968 1356 aa12.65□□□□□ -0.38
CDK2AP1-206ENST00000544658 FAM9BQ8IZU0 186 aa12.64□□□□□ -0.39
CDK2AP1-206ENST00000544658 PLEKHF1Q96S99 279 aa12.64□□□□□ -0.39
CDK2AP1-206ENST00000544658 BRWD3Q6RI45 1802 aa12.64□□□□□ -0.39
CDK2AP1-206ENST00000544658 PRKAR2BP31323 418 aa12.63□□□□□ -0.39
CDK2AP1-206ENST00000544658 TCP11L2Q8N4U5 519 aa12.63□□□□□ -0.39
CDK2AP1-206ENST00000544658 THSD7AQ9UPZ6 1657 aa12.63□□□□□ -0.39
CDK2AP1-206ENST00000544658 ZNF772Q68DY9 489 aaPredicted RBP12.62□□□□□ -0.39
CDK2AP1-206ENST00000544658 CHADLQ6NUI6 762 aa12.62□□□□□ -0.39
CDK2AP1-206ENST00000544658 ONECUT3O60422 494 aaPredicted RBP12.61□□□□□ -0.39
CDK2AP1-206ENST00000544658 BARGINQ6ZT62 677 aa12.61□□□□□ -0.39
CDK2AP1-206ENST00000544658 NUDCQ9Y266 331 aa12.61□□□□□ -0.39
CDK2AP1-206ENST00000544658 LRRC37A3O60309 1634 aa12.61□□□□□ -0.39
CDK2AP1-206ENST00000544658 DLG5Q8TDM6 1919 aa12.6□□□□□ -0.39
CDK2AP1-206ENST00000544658 PKD1L3Q7Z443 1732 aa12.6□□□□□ -0.39
CDK2AP1-206ENST00000544658 IL2RBP14784 551 aa12.6□□□□□ -0.39
CDK2AP1-206ENST00000544658 MTHFSDQ2M296 383 aaKnown RBP12.6□□□□□ -0.39
CDK2AP1-206ENST00000544658 OVOS2A0A0G2JMS6 1433 aa12.6□□□□□ -0.39
CDK2AP1-206ENST00000544658 PARP4Q9UKK3 1724 aaKnown RBP12.59□□□□□ -0.39
CDK2AP1-206ENST00000544658 FCHSD2O94868 740 aa12.59□□□□□ -0.39
CDK2AP1-206ENST00000544658 RBM6P78332 1123 aaKnown RBP12.59□□□□□ -0.39
CDK2AP1-206ENST00000544658 WDR43Q15061 677 aaKnown RBP eCLIP12.59□□□□□ -0.39
CDK2AP1-206ENST00000544658 FAM182BQ5T319 152 aa12.59□□□□□ -0.39
CDK2AP1-206ENST00000544658 SEPT12Q8IYM1 358 aa12.59□□□□□ -0.39
CDK2AP1-206ENST00000544658 RRP7AQ9Y3A4 280 aaKnown RBP12.59□□□□□ -0.39
CDK2AP1-206ENST00000544658 RGS12O14924 1447 aa12.59□□□□□ -0.39
CDK2AP1-206ENST00000544658 CYP27B1O15528 508 aa12.58□□□□□ -0.4
CDK2AP1-206ENST00000544658 RXRBP28702 533 aa12.58□□□□□ -0.4
CDK2AP1-206ENST00000544658 THRAP3Q9Y2W1 955 aaKnown RBP12.58□□□□□ -0.4
CDK2AP1-206ENST00000544658 VIRMAQ69YN4 1812 aaKnown RBP12.58□□□□□ -0.4
CDK2AP1-206ENST00000544658 GABBR2O75899 941 aa12.57□□□□□ -0.4
CDK2AP1-206ENST00000544658 TATP17735 454 aaPredicted RBP12.57□□□□□ -0.4
CDK2AP1-206ENST00000544658 MARCH10Q8NA82 808 aaPredicted RBP12.57□□□□□ -0.4
CDK2AP1-206ENST00000544658 RAPGEF4Q8WZA2 1011 aa12.57□□□□□ -0.4
CDK2AP1-206ENST00000544658 APAF1O14727 1248 aa12.56□□□□□ -0.4
CDK2AP1-206ENST00000544658 ZCRB1Q8TBF4 217 aaKnown RBP12.56□□□□□ -0.4
CDK2AP1-206ENST00000544658 TOGARAM1Q9Y4F4 1720 aa12.55□□□□□ -0.4
CDK2AP1-206ENST00000544658 PTF1AQ7RTS3 328 aa12.55□□□□□ -0.4
CDK2AP1-206ENST00000544658 DDX54Q8TDD1 881 aaKnown RBP12.55□□□□□ -0.4
CDK2AP1-206ENST00000544658 RUNDC1Q96C34 613 aa12.55□□□□□ -0.4
CDK2AP1-206ENST00000544658 TNS2Q63HR2 1409 aa12.54□□□□□ -0.4
CDK2AP1-206ENST00000544658 KAT6BQ8WYB5 2073 aa12.54□□□□□ -0.4
CDK2AP1-206ENST00000544658 A0A0G2JS52 829 aa12.54□□□□□ -0.4
CDK2AP1-206ENST00000544658 TMPOP42166 694 aaKnown RBP12.54□□□□□ -0.4
CDK2AP1-206ENST00000544658 MYT1Q01538 1121 aa12.54□□□□□ -0.4
CDK2AP1-206ENST00000544658 DCTN1Q14203 1278 aa12.54□□□□□ -0.4
CDK2AP1-206ENST00000544658 DDB1Q16531 1140 aa12.54□□□□□ -0.4
CDK2AP1-206ENST00000544658 ZNF530Q6P9A1 599 aaPredicted RBP12.54□□□□□ -0.4
CDK2AP1-206ENST00000544658 THUMPD2Q9BTF0 503 aaKnown RBP12.54□□□□□ -0.4
CDK2AP1-206ENST00000544658 LGR6Q9HBX8 967 aa12.54□□□□□ -0.4
CDK2AP1-206ENST00000544658 SALL2Q9Y467 1007 aaPredicted RBP12.54□□□□□ -0.4
CDK2AP1-206ENST00000544658 EXOC5O00471 708 aa12.53□□□□□ -0.4
CDK2AP1-206ENST00000544658 PHKG2P15735 406 aa12.53□□□□□ -0.4
CDK2AP1-206ENST00000544658 NEUROD2Q15784 382 aa12.53□□□□□ -0.4
CDK2AP1-206ENST00000544658 PLEKHO1Q53GL0 409 aaPredicted RBP12.53□□□□□ -0.4
CDK2AP1-206ENST00000544658 MPRIPQ6WCQ1 1025 aa12.53□□□□□ -0.4
CDK2AP1-206ENST00000544658 IL17REQ8NFR9 667 aa12.53□□□□□ -0.4
CDK2AP1-206ENST00000544658 TRIM35Q9UPQ4 493 aa12.53□□□□□ -0.4
CDK2AP1-206ENST00000544658 KDM6AO15550 1401 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms