RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 FAM208AQ9UK61 1670 aaKnown RBP12.26□□□□□ -0.45
CHD4-204ENST00000535810 AMPHP49418 695 aa12.25□□□□□ -0.45
CHD4-204ENST00000535810 PROM2Q8N271 834 aa12.25□□□□□ -0.45
CHD4-204ENST00000535810 LTV1Q96GA3 475 aaPredicted RBP12.25□□□□□ -0.45
CHD4-204ENST00000535810 POLR3GLQ9BT43 218 aa12.25□□□□□ -0.45
CHD4-204ENST00000535810 EXOC5O00471 708 aa12.24□□□□□ -0.45
CHD4-204ENST00000535810 IL2RBP14784 551 aa12.24□□□□□ -0.45
CHD4-204ENST00000535810 SBF2Q86WG5 1849 aa12.23□□□□□ -0.45
CHD4-204ENST00000535810 RREB1Q92766 1687 aa12.23□□□□□ -0.45
CHD4-204ENST00000535810 CGNL1Q0VF96 1302 aa12.23□□□□□ -0.45
CHD4-204ENST00000535810 SPON1Q9HCB6 807 aa12.23□□□□□ -0.45
CHD4-204ENST00000535810 RTN4Q9NQC3 1192 aaKnown RBP12.23□□□□□ -0.45
CHD4-204ENST00000535810 PPP1R1BQ9UD71 204 aaPredicted RBP12.23□□□□□ -0.45
CHD4-204ENST00000535810 FLT4P35916 1363 aa12.22□□□□□ -0.45
CHD4-204ENST00000535810 KIF24Q5T7B8 1368 aa12.22□□□□□ -0.45
CHD4-204ENST00000535810 PTF1AQ7RTS3 328 aa12.22□□□□□ -0.45
CHD4-204ENST00000535810 ZNF784Q8NCA9 323 aaPredicted RBP12.22□□□□□ -0.45
CHD4-204ENST00000535810 INSRP06213 1382 aa12.21□□□□□ -0.45
CHD4-204ENST00000535810 RGPD3A6NKT7 1758 aaPredicted RBP12.21□□□□□ -0.45
CHD4-204ENST00000535810 RGPD4Q7Z3J3 1758 aa12.21□□□□□ -0.45
CHD4-204ENST00000535810 SENP3-EIF4A1A0A087X0R7 540 aa12.21□□□□□ -0.45
CHD4-204ENST00000535810 NBPF14Q5TI25 921 aa12.21□□□□□ -0.45
CHD4-204ENST00000535810 BCL11BQ9C0K0 894 aaPredicted RBP12.21□□□□□ -0.45
CHD4-204ENST00000535810 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
CHD4-204ENST00000535810 RGPD2P0DJD1 1756 aa12.2□□□□□ -0.46
CHD4-204ENST00000535810 NUP188Q5SRE5 1749 aa12.2□□□□□ -0.46
CHD4-204ENST00000535810 ANKRD26Q9UPS8 1709 aa12.2□□□□□ -0.46
CHD4-204ENST00000535810 HSP90AB2PQ58FF8 381 aa12.2□□□□□ -0.46
CHD4-204ENST00000535810 PANK3Q9H999 370 aa12.2□□□□□ -0.46
CHD4-204ENST00000535810 FBXO3Q9UK99 471 aa12.2□□□□□ -0.46
CHD4-204ENST00000535810 EMILIN1Q9Y6C2 1016 aa12.2□□□□□ -0.46
CHD4-204ENST00000535810 MEGF6O75095 1541 aa12.2□□□□□ -0.46
CHD4-204ENST00000535810 KCNQ2O43526 872 aa12.19□□□□□ -0.46
CHD4-204ENST00000535810 NBPF6Q5VWK0 638 aa12.19□□□□□ -0.46
CHD4-204ENST00000535810 NBPF4Q96M43 638 aa12.19□□□□□ -0.46
CHD4-204ENST00000535810 NHSQ6T4R5 1651 aa12.19□□□□□ -0.46
CHD4-204ENST00000535810 KIF7Q2M1P5 1343 aa12.18□□□□□ -0.46
CHD4-204ENST00000535810 PLSCR1O15162 318 aa12.18□□□□□ -0.46
CHD4-204ENST00000535810 C1QTNF8P60827 252 aa12.18□□□□□ -0.46
CHD4-204ENST00000535810 USHBP1Q8N6Y0 703 aa12.17□□□□□ -0.46
CHD4-204ENST00000535810 CEP350Q5VT06 3117 aa12.17□□□□□ -0.46
CHD4-204ENST00000535810 SHANK3Q9BYB0 1731 aa12.17□□□□□ -0.46
CHD4-204ENST00000535810 NSD2O96028 1365 aa12.17□□□□□ -0.46
CHD4-204ENST00000535810 PPM1GO15355 546 aaPredicted RBP12.16□□□□□ -0.46
CHD4-204ENST00000535810 AMER1Q5JTC6 1135 aaPredicted RBP12.16□□□□□ -0.46
CHD4-204ENST00000535810 ACSBG1Q96GR2 724 aa12.16□□□□□ -0.46
CHD4-204ENST00000535810 POLKQ9UBT6 870 aa12.16□□□□□ -0.46
CHD4-204ENST00000535810 WASHC2AQ641Q2 1341 aa12.15□□□□□ -0.46
CHD4-204ENST00000535810 NCAPD2Q15021 1401 aa12.15□□□□□ -0.46
CHD4-204ENST00000535810 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
CHD4-204ENST00000535810 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
CHD4-204ENST00000535810 SPDYE2Q495Y8 402 aa12.15□□□□□ -0.46
CHD4-204ENST00000535810 DDX54Q8TDD1 881 aaKnown RBP12.15□□□□□ -0.46
CHD4-204ENST00000535810 MAP2P11137 1827 aaKnown RBP12.14□□□□□ -0.47
CHD4-204ENST00000535810 TNNT2P45379 298 aaPredicted RBP12.14□□□□□ -0.47
CHD4-204ENST00000535810 ZCRB1Q8TBF4 217 aaKnown RBP12.14□□□□□ -0.47
CHD4-204ENST00000535810 RAPGEF4Q8WZA2 1011 aa12.14□□□□□ -0.47
CHD4-204ENST00000535810 BTAF1O14981 1849 aa12.14□□□□□ -0.47
CHD4-204ENST00000535810 ANO8Q9HCE9 1232 aaPredicted RBP12.13□□□□□ -0.47
CHD4-204ENST00000535810 DOT1LQ8TEK3 1739 aa12.12□□□□□ -0.47
CHD4-204ENST00000535810 TATP17735 454 aaPredicted RBP12.12□□□□□ -0.47
CHD4-204ENST00000535810 TXNRD1Q16881 649 aa12.12□□□□□ -0.47
CHD4-204ENST00000535810 KNSTRNQ9Y448 316 aa12.12□□□□□ -0.47
CHD4-204ENST00000535810 KAT6BQ8WYB5 2073 aa12.11□□□□□ -0.47
CHD4-204ENST00000535810 PCDH11XQ9BZA7 1347 aa12.11□□□□□ -0.47
CHD4-204ENST00000535810 PCDH11YQ9BZA8 1340 aa12.11□□□□□ -0.47
CHD4-204ENST00000535810 EIF4A2Q14240 407 aaKnown RBP12.1□□□□□ -0.47
CHD4-204ENST00000535810 MORC1Q86VD1 984 aa12.1□□□□□ -0.47
CHD4-204ENST00000535810 EYA1Q99502 592 aa12.1□□□□□ -0.47
CHD4-204ENST00000535810 SSUH2Q9Y2M2 353 aa12.1□□□□□ -0.47
CHD4-204ENST00000535810 PKD1L3Q7Z443 1732 aa12.1□□□□□ -0.47
CHD4-204ENST00000535810 PAPPAQ13219 1627 aa12.09□□□□□ -0.47
CHD4-204ENST00000535810 PRIM1P49642 420 aaKnown RBP12.09□□□□□ -0.47
CHD4-204ENST00000535810 SYTL4Q96C24 671 aaPredicted RBP12.09□□□□□ -0.47
CHD4-204ENST00000535810 CYP27B1O15528 508 aa12.08□□□□□ -0.48
CHD4-204ENST00000535810 PER1O15534 1290 aaPredicted RBP12.08□□□□□ -0.48
CHD4-204ENST00000535810 IGSF1Q8N6C5 1336 aa12.08□□□□□ -0.48
CHD4-204ENST00000535810 CASZ1Q86V15 1759 aa12.07□□□□□ -0.48
CHD4-204ENST00000535810 VASPP50552 380 aaPredicted RBP12.07□□□□□ -0.48
CHD4-204ENST00000535810 PLEKHG2Q9H7P9 1386 aa12.06□□□□□ -0.48
CHD4-204ENST00000535810 TOGARAM1Q9Y4F4 1720 aa12.06□□□□□ -0.48
CHD4-204ENST00000535810 SLC15A2Q16348 729 aa12.06□□□□□ -0.48
CHD4-204ENST00000535810 LRRC4BQ9NT99 713 aa12.06□□□□□ -0.48
CHD4-204ENST00000535810 STK32BQ9NY57 414 aa12.06□□□□□ -0.48
CHD4-204ENST00000535810 PTGER2P43116 358 aa12.05□□□□□ -0.48
CHD4-204ENST00000535810 SLC27A3Q5K4L6 730 aa12.05□□□□□ -0.48
CHD4-204ENST00000535810 SYT17Q9BSW7 474 aa12.05□□□□□ -0.48
CHD4-204ENST00000535810 PDGFDQ9GZP0 370 aaPredicted RBP12.05□□□□□ -0.48
CHD4-204ENST00000535810 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.05□□□□□ -0.484e-11■■■■□ 19.6
CHD4-204ENST00000535810 SPG7Q9UQ90 795 aa12.05□□□□□ -0.48
CHD4-204ENST00000535810 NPC1L1Q9UHC9 1359 aa12.05□□□□□ -0.48
CHD4-204ENST00000535810 LY75O60449 1722 aa12.04□□□□□ -0.48
CHD4-204ENST00000535810 ZNF827Q17R98 1081 aa12.04□□□□□ -0.48
CHD4-204ENST00000535810 CC2D1BQ5T0F9 858 aaKnown RBP12.04□□□□□ -0.48
CHD4-204ENST00000535810 GIGYF1O75420 1035 aaPredicted RBP12.03□□□□□ -0.48
CHD4-204ENST00000535810 NKX1-1Q15270 411 aaPredicted RBP12.03□□□□□ -0.48
CHD4-204ENST00000535810 ZBTB7AO95365 584 aa12.02□□□□□ -0.49
CHD4-204ENST00000535810 PHKG2P15735 406 aa12.02□□□□□ -0.49
CHD4-204ENST00000535810 IL13P35225 146 aa12.02□□□□□ -0.49
CHD4-204ENST00000535810 KCNQ4P56696 695 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms