RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 GAS6Q14393 721 aa11.69□□□□□ -0.54
PTPRK-220ENST00000531466 SUZ12Q15022 739 aaKnown RBP11.69□□□□□ -0.54
PTPRK-220ENST00000531466 LOC100996750A0A140TA64 210 aa11.68□□□□□ -0.54
PTPRK-220ENST00000531466 ATP5J2-PTCD1G3V325 749 aa11.68□□□□□ -0.54
PTPRK-220ENST00000531466 MEN1O00255 615 aa11.68□□□□□ -0.54
PTPRK-220ENST00000531466 TMEM259Q4ZIN3 620 aa11.68□□□□□ -0.54
PTPRK-220ENST00000531466 LYPD4Q6UWN0 246 aa11.68□□□□□ -0.54
PTPRK-220ENST00000531466 KRTAP4-6Q9BYQ5 205 aa11.68□□□□□ -0.54
PTPRK-220ENST00000531466 MARSP56192 900 aaKnown RBP11.67□□□□□ -0.54
PTPRK-220ENST00000531466 GJD4Q96KN9 370 aaPredicted RBP11.66□□□□□ -0.54
PTPRK-220ENST00000531466 SRSF11Q05519 484 aaKnown RBP11.65□□□□□ -0.54
PTPRK-220ENST00000531466 ZNF837Q96EG3 531 aaPredicted RBP11.65□□□□□ -0.54
PTPRK-220ENST00000531466 BCANQ96GW7 911 aa11.65□□□□□ -0.54
PTPRK-220ENST00000531466 GOPCQ9HD26 462 aa11.65□□□□□ -0.54
PTPRK-220ENST00000531466 A0A1W2PRU2 124 aa11.64□□□□□ -0.55
PTPRK-220ENST00000531466 GPR25O00155 361 aa11.64□□□□□ -0.55
PTPRK-220ENST00000531466 RIPOR1Q6ZS17 1223 aa11.64□□□□□ -0.55
PTPRK-220ENST00000531466 TRIM52Q96A61 297 aa11.64□□□□□ -0.55
PTPRK-220ENST00000531466 MAP3K10Q02779 954 aa11.63□□□□□ -0.55
PTPRK-220ENST00000531466 CC2D2BQ6DHV5 1058 aa11.62□□□□□ -0.55
PTPRK-220ENST00000531466 TRIM22Q8IYM9 498 aa11.62□□□□□ -0.55
PTPRK-220ENST00000531466 IL27Q8NEV9 243 aa11.62□□□□□ -0.55
PTPRK-220ENST00000531466 CELA2BP08218 269 aaPredicted RBP11.61□□□□□ -0.55
PTPRK-220ENST00000531466 ERVK-9P63128 1117 aa11.61□□□□□ -0.55
PTPRK-220ENST00000531466 GPC1P35052 558 aa11.6□□□□□ -0.55
PTPRK-220ENST00000531466 SCTRP47872 440 aa11.6□□□□□ -0.55
PTPRK-220ENST00000531466 POU4F2Q12837 409 aa11.6□□□□□ -0.55
PTPRK-220ENST00000531466 DBN1Q16643 649 aa11.6□□□□□ -0.55
PTPRK-220ENST00000531466 SLC27A3Q5K4L6 730 aa11.6□□□□□ -0.55
PTPRK-220ENST00000531466 GPAT2Q6NUI2 795 aa11.6□□□□□ -0.55
PTPRK-220ENST00000531466 NEUROD2Q15784 382 aa11.59□□□□□ -0.55
PTPRK-220ENST00000531466 SCARF2Q96GP6 870 aaPredicted RBP11.59□□□□□ -0.55
PTPRK-220ENST00000531466 NLRP3Q96P20 1036 aa11.59□□□□□ -0.55
PTPRK-220ENST00000531466 GAS2L1Q99501 681 aaPredicted RBP11.59□□□□□ -0.55
PTPRK-220ENST00000531466 MBIPQ9NS73 344 aa11.59□□□□□ -0.55
PTPRK-220ENST00000531466 DNMT3AQ9Y6K1 912 aaPredicted RBP11.59□□□□□ -0.55
PTPRK-220ENST00000531466 RNF20Q5VTR2 975 aa11.58□□□□□ -0.56
PTPRK-220ENST00000531466 FOXR1Q6PIV2 292 aa11.58□□□□□ -0.56
PTPRK-220ENST00000531466 GTPBP3Q969Y2 492 aaKnown RBP11.58□□□□□ -0.56
PTPRK-220ENST00000531466 PCDHB11Q9Y5F2 797 aa11.58□□□□□ -0.56
PTPRK-220ENST00000531466 NR1H3Q13133 447 aa11.57□□□□□ -0.56
PTPRK-220ENST00000531466 KANK3Q6NY19 840 aa11.57□□□□□ -0.56
PTPRK-220ENST00000531466 GMCL1Q96IK5 515 aa11.57□□□□□ -0.56
PTPRK-220ENST00000531466 DYRK1BQ9Y463 629 aa11.57□□□□□ -0.56
PTPRK-220ENST00000531466 IGF1RP08069 1367 aa11.56□□□□□ -0.56
PTPRK-220ENST00000531466 CYP2U1Q7Z449 544 aa11.56□□□□□ -0.56
PTPRK-220ENST00000531466 CCDC125Q86Z20 511 aa11.56□□□□□ -0.56
PTPRK-220ENST00000531466 ARHGEF10LQ9HCE6 1279 aa11.56□□□□□ -0.56
PTPRK-220ENST00000531466 CLN3Q13286 438 aa11.55□□□□□ -0.56
PTPRK-220ENST00000531466 NBPF10Q6P3W6 841 aaKnown RBP11.55□□□□□ -0.56
PTPRK-220ENST00000531466 NBPF15Q8N660 670 aa11.55□□□□□ -0.56
PTPRK-220ENST00000531466 GRIP2Q9C0E4 1043 aa11.54□□□□□ -0.56
PTPRK-220ENST00000531466 OSBPL3Q9H4L5 887 aa11.54□□□□□ -0.56
PTPRK-220ENST00000531466 ENAMQ9NRM1 1142 aa11.54□□□□□ -0.56
PTPRK-220ENST00000531466 H7C1W4 665 aa11.53□□□□□ -0.56
PTPRK-220ENST00000531466 RAB6BQ9NRW1 208 aa11.53□□□□□ -0.56
PTPRK-220ENST00000531466 GPR37L1O60883 481 aa11.52□□□□□ -0.57
PTPRK-220ENST00000531466 TRERF1Q96PN7 1200 aa11.52□□□□□ -0.57
PTPRK-220ENST00000531466 ESF1Q9H501 851 aaKnown RBP11.52□□□□□ -0.57
PTPRK-220ENST00000531466 MCCD1P59942 119 aaPredicted RBP11.51□□□□□ -0.57
PTPRK-220ENST00000531466 TIMMDC1Q9NPL8 285 aa11.51□□□□□ -0.57
PTPRK-220ENST00000531466 TRAK2O60296 914 aa11.5□□□□□ -0.57
PTPRK-220ENST00000531466 BCRP11274 1271 aa11.5□□□□□ -0.57
PTPRK-220ENST00000531466 MTMR14Q8NCE2 650 aa11.5□□□□□ -0.57
PTPRK-220ENST00000531466 ACDQ96AP0 544 aa11.5□□□□□ -0.57
PTPRK-220ENST00000531466 ZNF330Q9Y3S2 320 aaPredicted RBP11.5□□□□□ -0.57
PTPRK-220ENST00000531466 CNTNAP5Q8WYK1 1306 aa11.5□□□□□ -0.57
PTPRK-220ENST00000531466 SPATA31C2B4DYI2 1134 aa11.49□□□□□ -0.57
PTPRK-220ENST00000531466 IGHA1P01876 353 aa11.49□□□□□ -0.57
PTPRK-220ENST00000531466 TAS1R3Q7RTX0 852 aa11.49□□□□□ -0.57
PTPRK-220ENST00000531466 NEDD1Q8NHV4 660 aa11.49□□□□□ -0.57
PTPRK-220ENST00000531466 NDUFB9Q9Y6M9 179 aa11.49□□□□□ -0.57
PTPRK-220ENST00000531466 WASLO00401 505 aaPredicted RBP11.48□□□□□ -0.57
PTPRK-220ENST00000531466 ZNF592Q92610 1267 aa11.48□□□□□ -0.57
PTPRK-220ENST00000531466 NUCKS1Q9H1E3 243 aaKnown RBP11.48□□□□□ -0.57
PTPRK-220ENST00000531466 F11P03951 625 aa11.47□□□□□ -0.57
PTPRK-220ENST00000531466 MX2P20592 715 aa11.47□□□□□ -0.57
PTPRK-220ENST00000531466 FOXK2Q01167 660 aa11.47□□□□□ -0.57
PTPRK-220ENST00000531466 BANK1Q8NDB2 785 aa11.47□□□□□ -0.57
PTPRK-220ENST00000531466 WDR44Q5JSH3 913 aa11.46□□□□□ -0.57
PTPRK-220ENST00000531466 GPAMQ9HCL2 828 aa11.46□□□□□ -0.57
PTPRK-220ENST00000531466 SNRKQ9NRH2 765 aa11.46□□□□□ -0.57
PTPRK-220ENST00000531466 PHF20L1A8MW92 1017 aa11.45□□□□□ -0.58
PTPRK-220ENST00000531466 IL2RAP01589 272 aa11.45□□□□□ -0.58
PTPRK-220ENST00000531466 PHKA2P46019 1235 aa11.45□□□□□ -0.58
PTPRK-220ENST00000531466 CNKSR1Q969H4 720 aa11.45□□□□□ -0.58
PTPRK-220ENST00000531466 CDCA7Q9BWT1 371 aaPredicted RBP11.45□□□□□ -0.58
PTPRK-220ENST00000531466 GNRH1P01148 92 aa11.44□□□□□ -0.58
PTPRK-220ENST00000531466 CENPCQ03188 943 aa11.44□□□□□ -0.58
PTPRK-220ENST00000531466 PODNQ7Z5L7 613 aa11.44□□□□□ -0.58
PTPRK-220ENST00000531466 CCDC85AQ96PX6 553 aaPredicted RBP11.44□□□□□ -0.58
PTPRK-220ENST00000531466 ESYT1Q9BSJ8 1104 aa11.44□□□□□ -0.58
PTPRK-220ENST00000531466 THBS1P07996 1170 aa11.43□□□□□ -0.58
PTPRK-220ENST00000531466 BRPF1P55201 1214 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-220ENST00000531466 BEND7Q8N7W2 519 aaPredicted RBP11.43□□□□□ -0.58
PTPRK-220ENST00000531466 DCAF5Q96JK2 942 aa11.43□□□□□ -0.58
PTPRK-220ENST00000531466 NSFL1CQ9UNZ2 370 aaKnown RBP11.43□□□□□ -0.58
PTPRK-220ENST00000531466 MYCP01106 439 aaPredicted RBP11.42□□□□□ -0.58
PTPRK-220ENST00000531466 CEP126Q9P2H0 1117 aa11.42□□□□□ -0.58
PTPRK-220ENST00000531466 SOCS7O14512 581 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms